RNA–Protein interactions for RNA: ENST00000508668.1

HMGN1P11-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 11, humanhuman

BASIC

Gene HMGN1P11, Length 303 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P11-201ENST00000508668 ZNF316A6NFI3 1004 aaPredicted RBP6.6□□□□□ -1.35
HMGN1P11-201ENST00000508668 SPDYE16A6NNV3 312 aaPredicted RBP6.6□□□□□ -1.35
HMGN1P11-201ENST00000508668 EVI5O60447 810 aa6.6□□□□□ -1.35
HMGN1P11-201ENST00000508668 SUPT5HO00267 1087 aaKnown RBP6.59□□□□□ -1.35
HMGN1P11-201ENST00000508668 ARSIQ5FYB1 569 aa6.59□□□□□ -1.35
HMGN1P11-201ENST00000508668 CHMP7Q8WUX9 453 aaPredicted RBP6.59□□□□□ -1.35
HMGN1P11-201ENST00000508668 KHSRPQ92945 711 aaKnown RBP eCLIP6.59□□□□□ -1.35
HMGN1P11-201ENST00000508668 MARVELD3Q96A59 401 aa6.59□□□□□ -1.35
HMGN1P11-201ENST00000508668 MLLT3P42568 568 aaPredicted RBP6.58□□□□□ -1.36
HMGN1P11-201ENST00000508668 TOPBP1Q92547 1522 aa6.58□□□□□ -1.36
HMGN1P11-201ENST00000508668 DNMBPQ6XZF7 1577 aa6.57□□□□□ -1.36
HMGN1P11-201ENST00000508668 TESPA1A2RU30 521 aaPredicted RBP6.57□□□□□ -1.36
HMGN1P11-201ENST00000508668 GRXCR2A6NFK2 248 aa6.57□□□□□ -1.36
HMGN1P11-201ENST00000508668 TULP1O00294 542 aaPredicted RBP6.57□□□□□ -1.36
HMGN1P11-201ENST00000508668 NUDT7P0C024 238 aa6.57□□□□□ -1.36
HMGN1P11-201ENST00000508668 EMP3P54852 163 aa6.57□□□□□ -1.36
HMGN1P11-201ENST00000508668 CYB5RLQ6IPT4 315 aa6.57□□□□□ -1.36
HMGN1P11-201ENST00000508668 ZSWIM6Q9HCJ5 1215 aa6.57□□□□□ -1.36
HMGN1P11-201ENST00000508668 GPR153Q6NV75 609 aa6.56□□□□□ -1.36
HMGN1P11-201ENST00000508668 DDX12PQ92771 950 aa6.56□□□□□ -1.36
HMGN1P11-201ENST00000508668 SOGA1O94964 1423 aa6.55□□□□□ -1.36
HMGN1P11-201ENST00000508668 ZNF608Q9ULD9 1512 aaPredicted RBP6.55□□□□□ -1.36
HMGN1P11-201ENST00000508668 SMYD5Q6GMV2 418 aa6.54□□□□□ -1.36
HMGN1P11-201ENST00000508668 AQRO60306 1485 aaKnown RBP eCLIP6.53□□□□□ -1.36
HMGN1P11-201ENST00000508668 EIF4G3O43432 1585 aaKnown RBP6.53□□□□□ -1.36
HMGN1P11-201ENST00000508668 HOXB1P14653 301 aaPredicted RBP6.53□□□□□ -1.36
HMGN1P11-201ENST00000508668 LMOD2Q6P5Q4 547 aa6.53□□□□□ -1.36
HMGN1P11-201ENST00000508668 ANO8Q9HCE9 1232 aaPredicted RBP6.53□□□□□ -1.36
HMGN1P11-201ENST00000508668 KDM4FA0A1W2PPD8 638 aa6.52□□□□□ -1.37
HMGN1P11-201ENST00000508668 PTGER2P43116 358 aa6.52□□□□□ -1.37
HMGN1P11-201ENST00000508668 RBM26Q5T8P6 1007 aaKnown RBP6.52□□□□□ -1.37
HMGN1P11-201ENST00000508668 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.52□□□□□ -1.37
HMGN1P11-201ENST00000508668 TDRD9Q8NDG6 1382 aaKnown RBP6.52□□□□□ -1.37
HMGN1P11-201ENST00000508668 LHX6Q9UPM6 363 aa6.51□□□□□ -1.37
HMGN1P11-201ENST00000508668 POLA1P09884 1462 aaPredicted RBP6.51□□□□□ -1.37
HMGN1P11-201ENST00000508668 ARHGEF11O15085 1522 aa6.5□□□□□ -1.37
HMGN1P11-201ENST00000508668 RIMBP3CA6NJZ7 1639 aa6.5□□□□□ -1.37
HMGN1P11-201ENST00000508668 RIMBP3BA6NNM3 1639 aa6.5□□□□□ -1.37
HMGN1P11-201ENST00000508668 RIMBP3Q9UFD9 1639 aa6.5□□□□□ -1.37
HMGN1P11-201ENST00000508668 ZNF454Q8N9F8 522 aa6.5□□□□□ -1.37
HMGN1P11-201ENST00000508668 FGD5Q6ZNL6 1462 aa6.49□□□□□ -1.37
HMGN1P11-201ENST00000508668 RAD54L2Q9Y4B4 1467 aa6.49□□□□□ -1.37
HMGN1P11-201ENST00000508668 FAM205CA6NFA0 338 aa6.49□□□□□ -1.37
HMGN1P11-201ENST00000508668 PHF14O94880 888 aa6.49□□□□□ -1.37
HMGN1P11-201ENST00000508668 OSBPP22059 807 aa6.49□□□□□ -1.37
HMGN1P11-201ENST00000508668 TPRNQ4KMQ1 711 aa6.49□□□□□ -1.37
HMGN1P11-201ENST00000508668 PCDHGA10Q9Y5H3 936 aa6.49□□□□□ -1.37
HMGN1P11-201ENST00000508668 SYNJ1O43426 1573 aa6.48□□□□□ -1.37
HMGN1P11-201ENST00000508668 GRIN2BQ13224 1484 aa6.48□□□□□ -1.37
HMGN1P11-201ENST00000508668 WDR97A6NE52 1622 aa6.48□□□□□ -1.37
HMGN1P11-201ENST00000508668 RBM33Q96EV2 1170 aaKnown RBP6.48□□□□□ -1.37
HMGN1P11-201ENST00000508668 JPH4Q96JJ6 628 aa6.48□□□□□ -1.37
HMGN1P11-201ENST00000508668 CHD1O14646 1710 aa6.47□□□□□ -1.37
HMGN1P11-201ENST00000508668 SNAPC4Q5SXM2 1469 aa6.47□□□□□ -1.37
HMGN1P11-201ENST00000508668 MAGI1Q96QZ7 1491 aaPredicted RBP6.47□□□□□ -1.37
HMGN1P11-201ENST00000508668 NUTM2FA1L443 756 aa6.47□□□□□ -1.37
HMGN1P11-201ENST00000508668 MAP3K7O43318 606 aa6.47□□□□□ -1.37
HMGN1P11-201ENST00000508668 PRIM1P49642 420 aaKnown RBP6.47□□□□□ -1.37
HMGN1P11-201ENST00000508668 FOSBP53539 338 aa6.47□□□□□ -1.37
HMGN1P11-201ENST00000508668 TYW1BQ6NUM6 668 aa6.47□□□□□ -1.37
HMGN1P11-201ENST00000508668 GPIHBP1Q8IV16 184 aa6.47□□□□□ -1.37
HMGN1P11-201ENST00000508668 HS3ST6Q96QI5 342 aa6.47□□□□□ -1.37
HMGN1P11-201ENST00000508668 EPAS1Q99814 870 aa6.47□□□□□ -1.37
HMGN1P11-201ENST00000508668 ERBB3P21860 1342 aa6.47□□□□□ -1.37
HMGN1P11-201ENST00000508668 TARBP1Q13395 1621 aaKnown RBP6.47□□□□□ -1.37
HMGN1P11-201ENST00000508668 PRKCSHP14314 528 aaPredicted RBP6.46□□□□□ -1.38
HMGN1P11-201ENST00000508668 EN1Q05925 392 aaPredicted RBP6.46□□□□□ -1.38
HMGN1P11-201ENST00000508668 WRNQ14191 1432 aaPredicted RBP eCLIP6.46□□□□□ -1.38
HMGN1P11-201ENST00000508668 PPP4R3BQ5MIZ7 849 aa6.46□□□□□ -1.38
HMGN1P11-201ENST00000508668 ZDHHC16Q969W1 377 aa6.46□□□□□ -1.38
HMGN1P11-201ENST00000508668 GAPVD1Q14C86 1478 aa6.46□□□□□ -1.38
HMGN1P11-201ENST00000508668 VARS2Q5ST30 1063 aaKnown RBP6.45□□□□□ -1.38
HMGN1P11-201ENST00000508668 FBXW7Q969H0 707 aa6.45□□□□□ -1.38
HMGN1P11-201ENST00000508668 SYNJ2O15056 1496 aa6.45□□□□□ -1.38
HMGN1P11-201ENST00000508668 PSDA5PKW4 1024 aaPredicted RBP6.44□□□□□ -1.38
HMGN1P11-201ENST00000508668 TSR1Q2NL82 804 aaKnown RBP6.44□□□□□ -1.38
HMGN1P11-201ENST00000508668 ADAM33Q9BZ11 813 aa6.44□□□□□ -1.38
HMGN1P11-201ENST00000508668 CDHR5Q9HBB8 845 aa6.44□□□□□ -1.38
HMGN1P11-201ENST00000508668 ZC3H15Q8WU90 426 aaKnown RBP6.43□□□□□ -1.38
HMGN1P11-201ENST00000508668 CUX1P39880 1505 aa6.42□□□□□ -1.38
HMGN1P11-201ENST00000508668 C6orf132Q5T0Z8 1188 aa6.42□□□□□ -1.38
HMGN1P11-201ENST00000508668 FAM9AQ8IZU1 332 aaPredicted RBP6.42□□□□□ -1.38
HMGN1P11-201ENST00000508668 RNF166Q96A37 237 aaPredicted RBP6.42□□□□□ -1.38
HMGN1P11-201ENST00000508668 ARAP1Q96P48 1450 aa6.41□□□□□ -1.38
HMGN1P11-201ENST00000508668 PBRM1Q86U86 1689 aa6.4□□□□□ -1.38
HMGN1P11-201ENST00000508668 KRTAP3-3Q9BYR6 98 aa6.4□□□□□ -1.38
HMGN1P11-201ENST00000508668 KRTAP3-2Q9BYR7 98 aa6.4□□□□□ -1.38
HMGN1P11-201ENST00000508668 BCL2L12Q9HB09 334 aa6.4□□□□□ -1.38
HMGN1P11-201ENST00000508668 ABCA10Q8WWZ4 1543 aa6.4□□□□□ -1.39
HMGN1P11-201ENST00000508668 GPR37O15354 613 aa6.39□□□□□ -1.39
HMGN1P11-201ENST00000508668 FCHSD2O94868 740 aa6.39□□□□□ -1.39
HMGN1P11-201ENST00000508668 PTPREP23469 700 aa6.39□□□□□ -1.39
HMGN1P11-201ENST00000508668 PTGDRQ13258 359 aa6.39□□□□□ -1.39
HMGN1P11-201ENST00000508668 KCNK17Q96T54 332 aa6.39□□□□□ -1.39
HMGN1P11-201ENST00000508668 KCNH8Q96L42 1107 aa6.38□□□□□ -1.39
HMGN1P11-201ENST00000508668 FHAD1B1AJZ9 1412 aa6.38□□□□□ -1.39
HMGN1P11-201ENST00000508668 CLASP1Q7Z460 1538 aa6.37□□□□□ -1.39
HMGN1P11-201ENST00000508668 GRIN2AQ12879 1464 aa6.37□□□□□ -1.39
HMGN1P11-201ENST00000508668 POTEB3A0JP26 581 aa6.37□□□□□ -1.39
HMGN1P11-201ENST00000508668 GNPATO15228 680 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms