RNA–Protein interactions for RNA: ENST00000508197.1

CAST-221, Transcript of calpastatin, humanhuman

TSL 3

Gene CAST, Length 567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-221ENST00000508197 NCOA1Q15788 1441 aa18.54■□□□□ 0.56
CAST-221ENST00000508197 ABCA6Q8N139 1617 aa18.53■□□□□ 0.56
CAST-221ENST00000508197 PRKAR2AP13861 404 aaKnown RBP18.53■□□□□ 0.56
CAST-221ENST00000508197 SPATA31D1Q6ZQQ2 1576 aa18.52■□□□□ 0.56
CAST-221ENST00000508197 NCKAP5LQ9HCH0 1330 aa18.51■□□□□ 0.55
CAST-221ENST00000508197 ZNF335Q9H4Z2 1342 aaPredicted RBP18.49■□□□□ 0.55
CAST-221ENST00000508197 CLIP1P30622 1438 aa18.49■□□□□ 0.55
CAST-221ENST00000508197 CDC42BPBQ9Y5S2 1711 aa18.49■□□□□ 0.55
CAST-221ENST00000508197 ZMYM3Q14202 1370 aa18.49■□□□□ 0.55
CAST-221ENST00000508197 IQSEC2Q5JU85 1478 aa18.48■□□□□ 0.55
CAST-221ENST00000508197 CNTLNQ9NXG0 1405 aa18.47■□□□□ 0.55
CAST-221ENST00000508197 ABCC1P33527 1531 aa18.46■□□□□ 0.55
CAST-221ENST00000508197 LRRIQ1Q96JM4 1722 aa18.46■□□□□ 0.55
CAST-221ENST00000508197 UBAP1LF5GYI3 381 aa18.45■□□□□ 0.54
CAST-221ENST00000508197 CAMSAP1Q5T5Y3 1602 aa18.45■□□□□ 0.54
CAST-221ENST00000508197 KIDINS220Q9ULH0 1771 aa18.45■□□□□ 0.54
CAST-221ENST00000508197 NPATQ14207 1427 aa18.43■□□□□ 0.54
CAST-221ENST00000508197 HNRNPMP52272 730 aaKnown RBP eCLIP18.43■□□□□ 0.54
CAST-221ENST00000508197 ZNF777Q9ULD5 760 aaPredicted RBP18.43■□□□□ 0.54
CAST-221ENST00000508197 CHADLQ6NUI6 762 aa18.42■□□□□ 0.54
CAST-221ENST00000508197 PREX2Q70Z35 1606 aa18.4■□□□□ 0.54
CAST-221ENST00000508197 ITSN2Q9NZM3 1697 aa18.39■□□□□ 0.53
CAST-221ENST00000508197 SPAG9O60271 1321 aaKnown RBP18.39■□□□□ 0.53
CAST-221ENST00000508197 SAMD9LQ8IVG5 1584 aa18.38■□□□□ 0.53
CAST-221ENST00000508197 PKD2Q13563 968 aa18.38■□□□□ 0.53
CAST-221ENST00000508197 CASKIN1Q8WXD9 1431 aa18.38■□□□□ 0.53
CAST-221ENST00000508197 PTPRKQ15262 1439 aa18.37■□□□□ 0.53
CAST-221ENST00000508197 GGT6Q6P531 493 aa18.36■□□□□ 0.53
CAST-221ENST00000508197 GPATCH8Q9UKJ3 1502 aaKnown RBP18.35■□□□□ 0.53
CAST-221ENST00000508197 TCOF1Q13428 1488 aaKnown RBP18.35■□□□□ 0.53
CAST-221ENST00000508197 PLA2R1Q13018 1463 aa18.33■□□□□ 0.53
CAST-221ENST00000508197 HSPA1LP34931 641 aa18.33■□□□□ 0.52
CAST-221ENST00000508197 CDC42BPAQ5VT25 1732 aa18.32■□□□□ 0.52
CAST-221ENST00000508197 MROH2AA6NES4 1674 aa18.32■□□□□ 0.52
CAST-221ENST00000508197 CCDC18Q5T9S5 1454 aa18.32■□□□□ 0.52
CAST-221ENST00000508197 SYCP2Q9BX26 1530 aa18.31■□□□□ 0.52
CAST-221ENST00000508197 A2MP01023 1474 aa18.3■□□□□ 0.52
CAST-221ENST00000508197 SUPT6HQ7KZ85 1726 aaKnown RBP18.29■□□□□ 0.52
CAST-221ENST00000508197 CFDP1Q9UEE9 299 aaPredicted RBP18.29■□□□□ 0.52
CAST-221ENST00000508197 KIAA1107Q9UPP5 1409 aa18.29■□□□□ 0.52
CAST-221ENST00000508197 PIP4K2BP78356 416 aa18.28■□□□□ 0.52
CAST-221ENST00000508197 CREBZFQ9NS37 354 aa18.28■□□□□ 0.52
CAST-221ENST00000508197 CEP170BQ9Y4F5 1589 aaPredicted RBP18.28■□□□□ 0.52
CAST-221ENST00000508197 CLTCQ00610 1675 aaKnown RBP18.28■□□□□ 0.52
CAST-221ENST00000508197 ZNF644Q9H582 1327 aaPredicted RBP18.27■□□□□ 0.52
CAST-221ENST00000508197 PLXNC1O60486 1568 aa18.27■□□□□ 0.52
CAST-221ENST00000508197 FBXO31Q5XUX0 539 aaPredicted RBP18.27■□□□□ 0.52
CAST-221ENST00000508197 ATP7AQ04656 1500 aa18.27■□□□□ 0.51
CAST-221ENST00000508197 MYO3AQ8NEV4 1616 aa18.27■□□□□ 0.51
CAST-221ENST00000508197 HAX1O00165 279 aa18.26■□□□□ 0.51
CAST-221ENST00000508197 ZNF142P52746 1687 aaPredicted RBP18.25■□□□□ 0.51
CAST-221ENST00000508197 FARP1Q9Y4F1 1045 aaPredicted RBP18.23■□□□□ 0.51
CAST-221ENST00000508197 INO80Q9ULG1 1556 aaPredicted RBP18.22■□□□□ 0.51
CAST-221ENST00000508197 A2ML1A8K2U0 1454 aa18.22■□□□□ 0.51
CAST-221ENST00000508197 TOM1O60784 492 aa18.22■□□□□ 0.51
CAST-221ENST00000508197 FYCO1Q9BQS8 1478 aa18.2■□□□□ 0.5
CAST-221ENST00000508197 DNMT1P26358 1616 aaKnown RBP18.2■□□□□ 0.5
CAST-221ENST00000508197 CCNB3Q8WWL7 1395 aa18.2■□□□□ 0.5
CAST-221ENST00000508197 PLEKHH2Q8IVE3 1493 aa18.2■□□□□ 0.5
CAST-221ENST00000508197 MBD5Q9P267 1494 aa18.19■□□□□ 0.5
CAST-221ENST00000508197 SHANK2Q9UPX8 1470 aa18.19■□□□□ 0.5
CAST-221ENST00000508197 MED1Q15648 1581 aaPredicted RBP18.18■□□□□ 0.5
CAST-221ENST00000508197 DHX29Q7Z478 1369 aaKnown RBP18.17■□□□□ 0.5
CAST-221ENST00000508197 NEURL4Q96JN8 1562 aa18.17■□□□□ 0.5
CAST-221ENST00000508197 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.17■□□□□ 0.5
CAST-221ENST00000508197 KIF3BO15066 747 aa18.16■□□□□ 0.5
CAST-221ENST00000508197 TNRQ92752 1358 aa18.16■□□□□ 0.5
CAST-221ENST00000508197 ANKLE2Q86XL3 938 aa18.15■□□□□ 0.5
CAST-221ENST00000508197 FBXO3Q9UK99 471 aa18.15■□□□□ 0.5
CAST-221ENST00000508197 CPS1P31327 1500 aa18.14■□□□□ 0.49
CAST-221ENST00000508197 ALKQ9UM73 1620 aa18.14■□□□□ 0.49
CAST-221ENST00000508197 RTEL1-TNFRSF6BF6WH68 1400 aa18.13■□□□□ 0.49
CAST-221ENST00000508197 THEMISQ8N1K5 641 aaPredicted RBP18.12■□□□□ 0.49
CAST-221ENST00000508197 MTUS2Q5JR59 1369 aa18.12■□□□□ 0.49
CAST-221ENST00000508197 MIER1Q8N108 512 aa18.11■□□□□ 0.49
CAST-221ENST00000508197 VWDEQ8N2E2 1590 aa18.11■□□□□ 0.49
CAST-221ENST00000508197 MIA2Q96PC5 1412 aa18.1■□□□□ 0.49
CAST-221ENST00000508197 WASHC2CQ9Y4E1 1318 aa18.1■□□□□ 0.49
CAST-221ENST00000508197 PLEKHG5O94827 1062 aa18.1■□□□□ 0.49
CAST-221ENST00000508197 ADGBQ8N7X0 1667 aa18.09■□□□□ 0.49
CAST-221ENST00000508197 PZPP20742 1482 aa18.09■□□□□ 0.49
CAST-221ENST00000508197 C19orf67A6NJJ6 358 aa18.08■□□□□ 0.48
CAST-221ENST00000508197 MED14O60244 1454 aa18.07■□□□□ 0.48
CAST-221ENST00000508197 NPHP4O75161 1426 aaPredicted RBP18.07■□□□□ 0.48
CAST-221ENST00000508197 RGS17Q9UGC6 210 aaPredicted RBP18.07■□□□□ 0.48
CAST-221ENST00000508197 TIAM1Q13009 1591 aa18.06■□□□□ 0.48
CAST-221ENST00000508197 PLCD3Q8N3E9 789 aa18.05■□□□□ 0.48
CAST-221ENST00000508197 POLR1AO95602 1720 aaPredicted RBP18.04■□□□□ 0.48
CAST-221ENST00000508197 UGGT1Q9NYU2 1555 aa18.03■□□□□ 0.48
CAST-221ENST00000508197 LRRC7Q96NW7 1537 aa18.03■□□□□ 0.48
CAST-221ENST00000508197 KDM5DQ9BY66 1539 aa18.03■□□□□ 0.48
CAST-221ENST00000508197 NLRP1Q9C000 1473 aa18.02■□□□□ 0.48
CAST-221ENST00000508197 MNX1P50219 401 aaPredicted RBP18.02■□□□□ 0.48
CAST-221ENST00000508197 CEP162Q5TB80 1403 aa18.01■□□□□ 0.47
CAST-221ENST00000508197 EVX2Q03828 476 aa18.01■□□□□ 0.47
CAST-221ENST00000508197 RSPH4AQ5TD94 716 aa18.01■□□□□ 0.47
CAST-221ENST00000508197 FAM135AQ9P2D6 1515 aa18■□□□□ 0.47
CAST-221ENST00000508197 SP7Q8TDD2 431 aaPredicted RBP18■□□□□ 0.47
CAST-221ENST00000508197 STRCP1A6NGW2 1772 aa17.99■□□□□ 0.47
CAST-221ENST00000508197 CCDC141Q6ZP82 1450 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms