RNA–Protein interactions for RNA: ENST00000507784.5

RNF4-209, Transcript of ring finger protein 4, humanhuman

TSL 2

Gene RNF4, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-209ENST00000507784 UNC13BO14795 1591 aa25.65■■□□□ 1.7
RNF4-209ENST00000507784 SLC4A1APQ9BWU0 796 aaKnown RBP25.65■■□□□ 1.7
RNF4-209ENST00000507784 ARHGEF40Q8TER5 1519 aa25.63■■□□□ 1.69
RNF4-209ENST00000507784 GGT6Q6P531 493 aa25.6■■□□□ 1.69
RNF4-209ENST00000507784 PZPP20742 1482 aa25.6■■□□□ 1.69
RNF4-209ENST00000507784 KANK1Q14678 1352 aa25.59■■□□□ 1.69
RNF4-209ENST00000507784 KDM5DQ9BY66 1539 aa25.59■■□□□ 1.69
RNF4-209ENST00000507784 DEPDC5O75140 1603 aa25.57■■□□□ 1.68
RNF4-209ENST00000507784 BCORL1Q5H9F3 1711 aa25.56■■□□□ 1.68
RNF4-209ENST00000507784 FAM135AQ9P2D6 1515 aa25.56■■□□□ 1.68
RNF4-209ENST00000507784 REREQ9P2R6 1566 aa25.56■■□□□ 1.68
RNF4-209ENST00000507784 IQGAP3Q86VI3 1631 aa25.55■■□□□ 1.68
RNF4-209ENST00000507784 PKD2Q13563 968 aa25.55■■□□□ 1.68
RNF4-209ENST00000507784 FOXD1Q16676 465 aa25.55■■□□□ 1.68
RNF4-209ENST00000507784 RNF17Q9BXT8 1623 aaKnown RBP25.54■■□□□ 1.68
RNF4-209ENST00000507784 ARID4BQ4LE39 1312 aaPredicted RBP25.53■■□□□ 1.68
RNF4-209ENST00000507784 CLSPNQ9HAW4 1339 aa25.53■■□□□ 1.68
RNF4-209ENST00000507784 MROH1Q8NDA8 1641 aa25.52■■□□□ 1.68
RNF4-209ENST00000507784 AGLP35573 1532 aa25.5■■□□□ 1.67
RNF4-209ENST00000507784 PRDM15P57071 1507 aaPredicted RBP25.5■■□□□ 1.67
RNF4-209ENST00000507784 MLECQ14165 292 aa25.5■■□□□ 1.67
RNF4-209ENST00000507784 SIGLEC1Q9BZZ2 1709 aa25.5■■□□□ 1.67
RNF4-209ENST00000507784 ZEB1P37275 1124 aaPredicted RBP25.49■■□□□ 1.67
RNF4-209ENST00000507784 CEP152O94986 1710 aa25.49■■□□□ 1.67
RNF4-209ENST00000507784 WASHC2CQ9Y4E1 1318 aa25.46■■□□□ 1.67
RNF4-209ENST00000507784 NEUROD1Q13562 356 aa25.46■■□□□ 1.67
RNF4-209ENST00000507784 SIN3AQ96ST3 1273 aa25.46■■□□□ 1.67
RNF4-209ENST00000507784 VWDEQ8N2E2 1590 aa25.46■■□□□ 1.67
RNF4-209ENST00000507784 TET3O43151 1660 aa25.44■■□□□ 1.66
RNF4-209ENST00000507784 E9PCH4 1651 aa25.39■■□□□ 1.66
RNF4-209ENST00000507784 ABCC3O15438 1527 aa25.38■■□□□ 1.65
RNF4-209ENST00000507784 LMTK2Q8IWU2 1503 aa25.38■■□□□ 1.65
RNF4-209ENST00000507784 ESF1Q9H501 851 aaKnown RBP25.38■■□□□ 1.65
RNF4-209ENST00000507784 ANKRD30BQ9BXX2 1392 aa25.38■■□□□ 1.65
RNF4-209ENST00000507784 ZC3H13Q5T200 1668 aaKnown RBP25.37■■□□□ 1.65
RNF4-209ENST00000507784 PPP6R1Q9UPN7 881 aa25.37■■□□□ 1.65
RNF4-209ENST00000507784 CAMSAP1Q5T5Y3 1602 aa25.35■■□□□ 1.65
RNF4-209ENST00000507784 CFAP65Q6ZU64 1925 aaKnown RBP25.34■■□□□ 1.65
RNF4-209ENST00000507784 CLTCQ00610 1675 aaKnown RBP25.34■■□□□ 1.65
RNF4-209ENST00000507784 EFCAB6Q5THR3 1501 aa25.33■■□□□ 1.65
RNF4-209ENST00000507784 SPHKAPQ2M3C7 1700 aa25.29■■□□□ 1.64
RNF4-209ENST00000507784 TONSLQ96HA7 1378 aa25.26■■□□□ 1.63
RNF4-209ENST00000507784 NPATQ14207 1427 aa25.26■■□□□ 1.63
RNF4-209ENST00000507784 PLA2R1Q13018 1463 aa25.25■■□□□ 1.63
RNF4-209ENST00000507784 RPRD2Q5VT52 1461 aaKnown RBP25.24■■□□□ 1.63
RNF4-209ENST00000507784 CCDC144AA2RUR9 1427 aa25.24■■□□□ 1.63
RNF4-209ENST00000507784 PTPRTO14522 1441 aa25.22■■□□□ 1.63
RNF4-209ENST00000507784 ARHGAP31Q2M1Z3 1444 aa25.22■■□□□ 1.63
RNF4-209ENST00000507784 FER1L4A9Z1Z3 1794 aa25.21■■□□□ 1.63
RNF4-209ENST00000507784 TRPM2O94759 1503 aa25.21■■□□□ 1.63
RNF4-209ENST00000507784 TIMELESSQ9UNS1 1208 aa25.2■■□□□ 1.62
RNF4-209ENST00000507784 CNTLNQ9NXG0 1405 aa25.2■■□□□ 1.62
RNF4-209ENST00000507784 ZMYM3Q14202 1370 aa25.18■■□□□ 1.62
RNF4-209ENST00000507784 PREX1Q8TCU6 1659 aa25.17■■□□□ 1.62
RNF4-209ENST00000507784 FBXO31Q5XUX0 539 aaPredicted RBP25.17■■□□□ 1.62
RNF4-209ENST00000507784 CLTCL1P53675 1640 aa25.16■■□□□ 1.62
RNF4-209ENST00000507784 PLPPR3Q6T4P5 718 aa25.16■■□□□ 1.62
RNF4-209ENST00000507784 MROH2AA6NES4 1674 aa25.15■■□□□ 1.62
RNF4-209ENST00000507784 NOS1P29475 1434 aa25.13■■□□□ 1.61
RNF4-209ENST00000507784 L3MBTL2Q969R5 705 aa25.13■■□□□ 1.61
RNF4-209ENST00000507784 UGGT1Q9NYU2 1555 aa25.13■■□□□ 1.61
RNF4-209ENST00000507784 KIF1BO60333 1816 aa25.12■■□□□ 1.61
RNF4-209ENST00000507784 CHGAP10645 457 aaKnown RBP25.12■■□□□ 1.61
RNF4-209ENST00000507784 RGL3Q3MIN7 710 aa25.12■■□□□ 1.61
RNF4-209ENST00000507784 MADDQ8WXG6 1647 aa25.12■■□□□ 1.61
RNF4-209ENST00000507784 RIMS1Q86UR5 1692 aaKnown RBP25.11■■□□□ 1.61
RNF4-209ENST00000507784 ERVK-7P63135 1459 aa25.11■■□□□ 1.61
RNF4-209ENST00000507784 SYNMO15061 1565 aa25.1■■□□□ 1.61
RNF4-209ENST00000507784 CEBPAP49715 358 aaPredicted RBP25.09■■□□□ 1.61
RNF4-209ENST00000507784 ADAMTSL3P82987 1691 aa25.09■■□□□ 1.61
RNF4-209ENST00000507784 C3P01024 1663 aa25.08■■□□□ 1.61
RNF4-209ENST00000507784 PPP1R15AO75807 674 aaPredicted RBP25.08■■□□□ 1.61
RNF4-209ENST00000507784 SPATA31D1Q6ZQQ2 1576 aa25.05■■□□□ 1.6
RNF4-209ENST00000507784 SLC52A1Q9NWF4 448 aa25.05■■□□□ 1.6
RNF4-209ENST00000507784 IDI1Q13907 227 aa25.04■■□□□ 1.6
RNF4-209ENST00000507784 KDM2AQ9Y2K7 1162 aa25.04■■□□□ 1.6
RNF4-209ENST00000507784 DCAF11Q8TEB1 546 aa25.03■■□□□ 1.6
RNF4-209ENST00000507784 PIK3C2BO00750 1634 aa25.03■■□□□ 1.6
RNF4-209ENST00000507784 ZNF326Q5BKZ1 582 aaKnown RBP25.02■■□□□ 1.6
RNF4-209ENST00000507784 TNRQ92752 1358 aa25.02■■□□□ 1.6
RNF4-209ENST00000507784 STAG3Q9UJ98 1225 aa25.01■■□□□ 1.59
RNF4-209ENST00000507784 SPATA31E1Q6ZUB1 1445 aa25.01■■□□□ 1.59
RNF4-209ENST00000507784 MYO5BQ9ULV0 1848 aa24.96■■□□□ 1.59
RNF4-209ENST00000507784 ADGRB3O60242 1522 aa24.95■■□□□ 1.58
RNF4-209ENST00000507784 NEURL4Q96JN8 1562 aa24.94■■□□□ 1.58
RNF4-209ENST00000507784 NBPF8Q3BBV2 869 aa24.92■■□□□ 1.58
RNF4-209ENST00000507784 TMEM131LA2VDJ0 1609 aa24.91■■□□□ 1.58
RNF4-209ENST00000507784 RPGRIP1LQ68CZ1 1315 aa24.88■■□□□ 1.57
RNF4-209ENST00000507784 PTPRMP28827 1452 aa24.88■■□□□ 1.57
RNF4-209ENST00000507784 IFT172Q9UG01 1749 aa24.87■■□□□ 1.57
RNF4-209ENST00000507784 PPLO60437 1756 aa24.86■■□□□ 1.57
RNF4-209ENST00000507784 NLRP1Q9C000 1473 aa24.86■■□□□ 1.57
RNF4-209ENST00000507784 STAC3Q96MF2 364 aa24.86■■□□□ 1.57
RNF4-209ENST00000507784 NUTM2DQ5VT03 806 aaPredicted RBP24.85■■□□□ 1.57
RNF4-209ENST00000507784 UHRF1BP1Q6BDS2 1440 aa24.85■■□□□ 1.57
RNF4-209ENST00000507784 A2ML1A8K2U0 1454 aa24.83■■□□□ 1.57
RNF4-209ENST00000507784 MYO3AQ8NEV4 1616 aa24.83■■□□□ 1.56
RNF4-209ENST00000507784 PRAG1Q86YV5 1406 aa24.82■■□□□ 1.56
RNF4-209ENST00000507784 UBR1Q8IWV7 1749 aa24.82■■□□□ 1.56
RNF4-209ENST00000507784 KDM4FA0A1W2PPD8 638 aa24.81■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms