RNA–Protein interactions for RNA: ENST00000506188.5

SNHG4-203, Transcript of small nucleolar RNA host gene 4, humanhuman

TSL 4

Gene SNHG4, Length 801 nt, Biotype processed transcript, Subcellular localisation Nucleoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG4-203ENST00000506188 MROH2AA6NES4 1674 aa21.5■■□□□ 1.03
SNHG4-203ENST00000506188 C3P01024 1663 aa21.5■■□□□ 1.03
SNHG4-203ENST00000506188 SETD1BQ9UPS6 1966 aaKnown RBP21.49■■□□□ 1.03
SNHG4-203ENST00000506188 PTPRKQ15262 1439 aa21.48■■□□□ 1.03
SNHG4-203ENST00000506188 DUOX2Q9NRD8 1548 aa21.48■■□□□ 1.03
SNHG4-203ENST00000506188 KDM5DQ9BY66 1539 aa21.47■■□□□ 1.03
SNHG4-203ENST00000506188 KANK1Q14678 1352 aa21.47■■□□□ 1.03
SNHG4-203ENST00000506188 CLTCQ00610 1675 aaKnown RBP21.46■■□□□ 1.03
SNHG4-203ENST00000506188 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.45■■□□□ 1.028e-8■■□□□ 13.5
SNHG4-203ENST00000506188 TNRQ92752 1358 aa21.44■■□□□ 1.02
SNHG4-203ENST00000506188 ERBINQ96RT1 1412 aa21.44■■□□□ 1.02
SNHG4-203ENST00000506188 FBXO31Q5XUX0 539 aaPredicted RBP21.43■■□□□ 1.02
SNHG4-203ENST00000506188 PKD2Q13563 968 aa21.42■■□□□ 1.02
SNHG4-203ENST00000506188 PPARGC1BQ86YN6 1023 aaKnown RBP21.42■■□□□ 1.02
SNHG4-203ENST00000506188 PZPP20742 1482 aa21.41■■□□□ 1.02
SNHG4-203ENST00000506188 ILDR1Q86SU0 546 aaPredicted RBP21.41■■□□□ 1.02
SNHG4-203ENST00000506188 DNMT1P26358 1616 aaKnown RBP21.4■■□□□ 1.02
SNHG4-203ENST00000506188 THEMISQ8N1K5 641 aaPredicted RBP21.4■■□□□ 1.02
SNHG4-203ENST00000506188 NCOA1Q15788 1441 aa21.39■■□□□ 1.02
SNHG4-203ENST00000506188 EIF2AK4Q9P2K8 1649 aaKnown RBP21.39■■□□□ 1.01
SNHG4-203ENST00000506188 FBXO41Q8TF61 875 aa21.37■■□□□ 1.01
SNHG4-203ENST00000506188 PTPRTO14522 1441 aa21.37■■□□□ 1.01
SNHG4-203ENST00000506188 A2ML1A8K2U0 1454 aa21.35■■□□□ 1.01
SNHG4-203ENST00000506188 ITGAEP38570 1179 aa21.35■■□□□ 1.01
SNHG4-203ENST00000506188 CERKQ8TCT0 537 aa21.34■■□□□ 1.01
SNHG4-203ENST00000506188 RNF17Q9BXT8 1623 aaKnown RBP21.33■■□□□ 1.01
SNHG4-203ENST00000506188 NCKAP5LQ9HCH0 1330 aa21.33■■□□□ 1.01
SNHG4-203ENST00000506188 ABCC3O15438 1527 aa21.33■■□□□ 1
SNHG4-203ENST00000506188 NLRP1Q9C000 1473 aa21.32■■□□□ 1
SNHG4-203ENST00000506188 ANKLE2Q86XL3 938 aa21.32■■□□□ 1
SNHG4-203ENST00000506188 CAMSAP1Q5T5Y3 1602 aa21.32■■□□□ 1
SNHG4-203ENST00000506188 ADGRL2O95490 1459 aa21.32■■□□□ 1
SNHG4-203ENST00000506188 PLA2R1Q13018 1463 aa21.32■■□□□ 1
SNHG4-203ENST00000506188 CEP170BQ9Y4F5 1589 aaPredicted RBP21.31■■□□□ 1
SNHG4-203ENST00000506188 CROCC2H7BZ55 1655 aa21.31■■□□□ 1
SNHG4-203ENST00000506188 ANKRD50Q9ULJ7 1429 aa21.31■■□□□ 1
SNHG4-203ENST00000506188 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.31■■□□□ 1
SNHG4-203ENST00000506188 ZC3H13Q5T200 1668 aaKnown RBP21.29■■□□□ 1
SNHG4-203ENST00000506188 STAG3Q9UJ98 1225 aa21.29■■□□□ 1
SNHG4-203ENST00000506188 MYO3AQ8NEV4 1616 aa21.29■■□□□ 1
SNHG4-203ENST00000506188 ROCK1Q13464 1354 aa21.28■■□□□ 1
SNHG4-203ENST00000506188 ARHGAP31Q2M1Z3 1444 aa21.28■■□□□ 1
SNHG4-203ENST00000506188 PRDM15P57071 1507 aaPredicted RBP21.25■□□□□ 0.99
SNHG4-203ENST00000506188 ERVK-7P63135 1459 aa21.24■□□□□ 0.99
SNHG4-203ENST00000506188 UGGT1Q9NYU2 1555 aa21.23■□□□□ 0.99
SNHG4-203ENST00000506188 ZNF142P52746 1687 aaPredicted RBP21.22■□□□□ 0.99
SNHG4-203ENST00000506188 STRCQ7RTU9 1775 aa21.22■□□□□ 0.99
SNHG4-203ENST00000506188 EID1Q9Y6B2 187 aa21.21■□□□□ 0.99
SNHG4-203ENST00000506188 MROH1Q8NDA8 1641 aa21.21■□□□□ 0.99
SNHG4-203ENST00000506188 SPATA31D1Q6ZQQ2 1576 aa21.2■□□□□ 0.98
SNHG4-203ENST00000506188 SLC52A1Q9NWF4 448 aa21.19■□□□□ 0.98
SNHG4-203ENST00000506188 LMTK2Q8IWU2 1503 aa21.18■□□□□ 0.98
SNHG4-203ENST00000506188 DEPDC5O75140 1603 aa21.15■□□□□ 0.98
SNHG4-203ENST00000506188 RRBP1Q9P2E9 1410 aaKnown RBP21.15■□□□□ 0.98
SNHG4-203ENST00000506188 TXNDC2Q86VQ3 553 aa21.15■□□□□ 0.98
SNHG4-203ENST00000506188 NUP155O75694 1391 aa21.14■□□□□ 0.98
SNHG4-203ENST00000506188 ZNF335Q9H4Z2 1342 aaPredicted RBP21.14■□□□□ 0.97
SNHG4-203ENST00000506188 HDGFP51858 240 aaKnown RBP21.14■□□□□ 0.97
SNHG4-203ENST00000506188 IDI1Q13907 227 aa21.13■□□□□ 0.97
SNHG4-203ENST00000506188 CEP152O94986 1710 aa21.12■□□□□ 0.97
SNHG4-203ENST00000506188 RPRD2Q5VT52 1461 aaKnown RBP21.12■□□□□ 0.97
SNHG4-203ENST00000506188 NPHP4O75161 1426 aaPredicted RBP21.12■□□□□ 0.97
SNHG4-203ENST00000506188 VWDEQ8N2E2 1590 aa21.1■□□□□ 0.97
SNHG4-203ENST00000506188 EFCAB6Q5THR3 1501 aa21.08■□□□□ 0.96
SNHG4-203ENST00000506188 BCANQ96GW7 911 aa21.07■□□□□ 0.96
SNHG4-203ENST00000506188 MED14O60244 1454 aa21.07■□□□□ 0.96
SNHG4-203ENST00000506188 IQSEC2Q5JU85 1478 aa21.07■□□□□ 0.96
SNHG4-203ENST00000506188 NOS1P29475 1434 aa21.06■□□□□ 0.96
SNHG4-203ENST00000506188 CHGAP10645 457 aaKnown RBP21.06■□□□□ 0.96
SNHG4-203ENST00000506188 TMEM2Q9UHN6 1383 aa21.06■□□□□ 0.96
SNHG4-203ENST00000506188 SCAF11Q99590 1463 aaKnown RBP21.05■□□□□ 0.96
SNHG4-203ENST00000506188 TRIM52Q96A61 297 aa21.04■□□□□ 0.96
SNHG4-203ENST00000506188 LTBP4Q8N2S1 1624 aa21.04■□□□□ 0.96
SNHG4-203ENST00000506188 UBAP1LF5GYI3 381 aa21.03■□□□□ 0.96
SNHG4-203ENST00000506188 PPP1R15AO75807 674 aaPredicted RBP21.03■□□□□ 0.96
SNHG4-203ENST00000506188 LTKP29376 864 aa21.03■□□□□ 0.96
SNHG4-203ENST00000506188 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.01■□□□□ 0.95
SNHG4-203ENST00000506188 UNC13BO14795 1591 aa21.01■□□□□ 0.95
SNHG4-203ENST00000506188 TET3O43151 1660 aa20.99■□□□□ 0.95
SNHG4-203ENST00000506188 SLIT1O75093 1534 aa20.99■□□□□ 0.95
SNHG4-203ENST00000506188 CPS1P31327 1500 aa20.99■□□□□ 0.95
SNHG4-203ENST00000506188 TOM1O60784 492 aa20.99■□□□□ 0.95
SNHG4-203ENST00000506188 ARHGAP23Q9P227 1491 aa20.99■□□□□ 0.95
SNHG4-203ENST00000506188 ACIN1Q9UKV3 1341 aaKnown RBP20.99■□□□□ 0.95
SNHG4-203ENST00000506188 NEURL4Q96JN8 1562 aa20.98■□□□□ 0.95
SNHG4-203ENST00000506188 POLR1AO95602 1720 aaPredicted RBP20.98■□□□□ 0.95
SNHG4-203ENST00000506188 NAIPQ13075 1403 aa20.97■□□□□ 0.95
SNHG4-203ENST00000506188 CFAP65Q6ZU64 1925 aaKnown RBP20.97■□□□□ 0.95
SNHG4-203ENST00000506188 UBR1Q8IWV7 1749 aa20.96■□□□□ 0.95
SNHG4-203ENST00000506188 HFM1A2PYH4 1435 aa20.95■□□□□ 0.95
SNHG4-203ENST00000506188 PIK3C2BO00750 1634 aa20.95■□□□□ 0.94
SNHG4-203ENST00000506188 SYNMO15061 1565 aa20.93■□□□□ 0.94
SNHG4-203ENST00000506188 IQGAP3Q86VI3 1631 aa20.93■□□□□ 0.94
SNHG4-203ENST00000506188 IQGAP1P46940 1657 aa20.93■□□□□ 0.94
SNHG4-203ENST00000506188 SLC4A1APQ9BWU0 796 aaKnown RBP20.93■□□□□ 0.94
SNHG4-203ENST00000506188 SCAF1Q9H7N4 1312 aaKnown RBP20.93■□□□□ 0.94
SNHG4-203ENST00000506188 ADGRB3O60242 1522 aa20.93■□□□□ 0.94
SNHG4-203ENST00000506188 SLC26A8Q96RN1 970 aa20.92■□□□□ 0.94
SNHG4-203ENST00000506188 KDM5AP29375 1690 aaKnown RBP20.92■□□□□ 0.94
SNHG4-203ENST00000506188 ZNF326Q5BKZ1 582 aaKnown RBP20.91■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms