RNA–Protein interactions for RNA: ENST00000505823.5

PRDM2-214, Transcript of PR/SET domain 2, humanhuman

TSL 1 (best) BASIC

Gene PRDM2, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM2-214ENST00000505823 FAM135AQ9P2D6 1515 aa18.44■□□□□ 0.54
PRDM2-214ENST00000505823 MAST1Q9Y2H9 1570 aa18.43■□□□□ 0.54
PRDM2-214ENST00000505823 PTPN23Q9H3S7 1636 aa18.43■□□□□ 0.54
PRDM2-214ENST00000505823 FAM50AQ14320 339 aaKnown RBP18.43■□□□□ 0.54
PRDM2-214ENST00000505823 C3P01024 1663 aa18.43■□□□□ 0.54
PRDM2-214ENST00000505823 ANKRD30AQ9BXX3 1397 aa18.41■□□□□ 0.54
PRDM2-214ENST00000505823 SHANK2Q9UPX8 1470 aa18.4■□□□□ 0.54
PRDM2-214ENST00000505823 CLTCQ00610 1675 aaKnown RBP18.39■□□□□ 0.53
PRDM2-214ENST00000505823 RRP7BPQ9NSQ0 103 aa18.39■□□□□ 0.53
PRDM2-214ENST00000505823 KIF15Q9NS87 1388 aa18.39■□□□□ 0.53
PRDM2-214ENST00000505823 DUOX2Q9NRD8 1548 aa18.39■□□□□ 0.53
PRDM2-214ENST00000505823 ABCC5O15440 1437 aa18.38■□□□□ 0.53
PRDM2-214ENST00000505823 DAPK1P53355 1430 aa18.38■□□□□ 0.53
PRDM2-214ENST00000505823 TCOF1Q13428 1488 aaKnown RBP18.38■□□□□ 0.53
PRDM2-214ENST00000505823 KDM5DQ9BY66 1539 aa18.37■□□□□ 0.53
PRDM2-214ENST00000505823 KANK1Q14678 1352 aa18.36■□□□□ 0.53
PRDM2-214ENST00000505823 PTPRKQ15262 1439 aa18.35■□□□□ 0.53
PRDM2-214ENST00000505823 CHIC2Q9UKJ5 165 aa18.35■□□□□ 0.53
PRDM2-214ENST00000505823 ERBINQ96RT1 1412 aa18.34■□□□□ 0.53
PRDM2-214ENST00000505823 DNMT1P26358 1616 aaKnown RBP18.34■□□□□ 0.53
PRDM2-214ENST00000505823 EIF2AK4Q9P2K8 1649 aaKnown RBP18.34■□□□□ 0.53
PRDM2-214ENST00000505823 CNKSR2Q8WXI2 1034 aa18.33■□□□□ 0.52
PRDM2-214ENST00000505823 PKD2Q13563 968 aa18.32■□□□□ 0.52
PRDM2-214ENST00000505823 PZPP20742 1482 aa18.32■□□□□ 0.52
PRDM2-214ENST00000505823 TNRQ92752 1358 aa18.31■□□□□ 0.52
PRDM2-214ENST00000505823 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.3■□□□□ 0.52
PRDM2-214ENST00000505823 THEMISQ8N1K5 641 aaPredicted RBP18.29■□□□□ 0.52
PRDM2-214ENST00000505823 CROCC2H7BZ55 1655 aa18.28■□□□□ 0.52
PRDM2-214ENST00000505823 RNF17Q9BXT8 1623 aaKnown RBP18.28■□□□□ 0.52
PRDM2-214ENST00000505823 PTPRTO14522 1441 aa18.28■□□□□ 0.52
PRDM2-214ENST00000505823 NCOA1Q15788 1441 aa18.27■□□□□ 0.52
PRDM2-214ENST00000505823 FBXO31Q5XUX0 539 aaPredicted RBP18.27■□□□□ 0.52
PRDM2-214ENST00000505823 ILDR1Q86SU0 546 aaPredicted RBP18.27■□□□□ 0.52
PRDM2-214ENST00000505823 FBXO41Q8TF61 875 aa18.27■□□□□ 0.52
PRDM2-214ENST00000505823 ZC3H13Q5T200 1668 aaKnown RBP18.27■□□□□ 0.52
PRDM2-214ENST00000505823 A2ML1A8K2U0 1454 aa18.26■□□□□ 0.51
PRDM2-214ENST00000505823 NLRP1Q9C000 1473 aa18.25■□□□□ 0.51
PRDM2-214ENST00000505823 CEP170BQ9Y4F5 1589 aaPredicted RBP18.25■□□□□ 0.51
PRDM2-214ENST00000505823 ABCC3O15438 1527 aa18.24■□□□□ 0.51
PRDM2-214ENST00000505823 CAMSAP1Q5T5Y3 1602 aa18.24■□□□□ 0.51
PRDM2-214ENST00000505823 MYO3AQ8NEV4 1616 aa18.24■□□□□ 0.51
PRDM2-214ENST00000505823 PLA2R1Q13018 1463 aa18.24■□□□□ 0.51
PRDM2-214ENST00000505823 ADGRL2O95490 1459 aa18.23■□□□□ 0.51
PRDM2-214ENST00000505823 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.23■□□□□ 0.51
PRDM2-214ENST00000505823 ANKLE2Q86XL3 938 aa18.23■□□□□ 0.51
PRDM2-214ENST00000505823 PPARGC1BQ86YN6 1023 aaKnown RBP18.23■□□□□ 0.51
PRDM2-214ENST00000505823 CERKQ8TCT0 537 aa18.23■□□□□ 0.51
PRDM2-214ENST00000505823 ANKRD50Q9ULJ7 1429 aa18.22■□□□□ 0.51
PRDM2-214ENST00000505823 ZNF142P52746 1687 aaPredicted RBP18.22■□□□□ 0.51
PRDM2-214ENST00000505823 NCKAP5LQ9HCH0 1330 aa18.21■□□□□ 0.51
PRDM2-214ENST00000505823 ITGAEP38570 1179 aa18.2■□□□□ 0.5
PRDM2-214ENST00000505823 STAG3Q9UJ98 1225 aa18.2■□□□□ 0.5
PRDM2-214ENST00000505823 ROCK1Q13464 1354 aa18.19■□□□□ 0.5
PRDM2-214ENST00000505823 ARHGAP31Q2M1Z3 1444 aa18.19■□□□□ 0.5
PRDM2-214ENST00000505823 STRCQ7RTU9 1775 aa18.19■□□□□ 0.5
PRDM2-214ENST00000505823 PRDM15P57071 1507 aaPredicted RBP18.18■□□□□ 0.5
PRDM2-214ENST00000505823 ERVK-7P63135 1459 aa18.16■□□□□ 0.5
PRDM2-214ENST00000505823 UGGT1Q9NYU2 1555 aa18.16■□□□□ 0.5
PRDM2-214ENST00000505823 SPATA31D1Q6ZQQ2 1576 aa18.14■□□□□ 0.49
PRDM2-214ENST00000505823 MROH1Q8NDA8 1641 aa18.14■□□□□ 0.49
PRDM2-214ENST00000505823 EID1Q9Y6B2 187 aa18.14■□□□□ 0.49
PRDM2-214ENST00000505823 DEPDC5O75140 1603 aa18.13■□□□□ 0.49
PRDM2-214ENST00000505823 NCBP3Q53F19 620 aaKnown RBP18.13■□□□□ 0.49
PRDM2-214ENST00000505823 CEP152O94986 1710 aa18.12■□□□□ 0.49
PRDM2-214ENST00000505823 SLC52A1Q9NWF4 448 aa18.12■□□□□ 0.49
PRDM2-214ENST00000505823 LMTK2Q8IWU2 1503 aa18.12■□□□□ 0.49
PRDM2-214ENST00000505823 HOXD11P31277 338 aaPredicted RBP18.09■□□□□ 0.49
PRDM2-214ENST00000505823 HDGFP51858 240 aaKnown RBP18.09■□□□□ 0.49
PRDM2-214ENST00000505823 RPRD2Q5VT52 1461 aaKnown RBP18.08■□□□□ 0.49
PRDM2-214ENST00000505823 CFAP65Q6ZU64 1925 aaKnown RBP18.08■□□□□ 0.48
PRDM2-214ENST00000505823 RRBP1Q9P2E9 1410 aaKnown RBP18.07■□□□□ 0.48
PRDM2-214ENST00000505823 VWDEQ8N2E2 1590 aa18.06■□□□□ 0.48
PRDM2-214ENST00000505823 TXNDC2Q86VQ3 553 aa18.06■□□□□ 0.48
PRDM2-214ENST00000505823 RNF216Q9NWF9 866 aaPredicted RBP18.06■□□□□ 0.48
PRDM2-214ENST00000505823 NUP155O75694 1391 aa18.05■□□□□ 0.48
PRDM2-214ENST00000505823 IQSEC2Q5JU85 1478 aa18.05■□□□□ 0.48
PRDM2-214ENST00000505823 NPHP4O75161 1426 aaPredicted RBP18.05■□□□□ 0.48
PRDM2-214ENST00000505823 ZNF335Q9H4Z2 1342 aaPredicted RBP18.04■□□□□ 0.48
PRDM2-214ENST00000505823 EFCAB6Q5THR3 1501 aa18.04■□□□□ 0.48
PRDM2-214ENST00000505823 IDI1Q13907 227 aa18.03■□□□□ 0.48
PRDM2-214ENST00000505823 POLR1AO95602 1720 aaPredicted RBP18.03■□□□□ 0.48
PRDM2-214ENST00000505823 MED14O60244 1454 aa18.02■□□□□ 0.48
PRDM2-214ENST00000505823 DCAF8L1A6NGE4 600 aa18.02■□□□□ 0.48
PRDM2-214ENST00000505823 TET3O43151 1660 aa18■□□□□ 0.47
PRDM2-214ENST00000505823 NOS1P29475 1434 aa18■□□□□ 0.47
PRDM2-214ENST00000505823 BCANQ96GW7 911 aa18■□□□□ 0.47
PRDM2-214ENST00000505823 SCAF11Q99590 1463 aaKnown RBP18■□□□□ 0.47
PRDM2-214ENST00000505823 ACIN1Q9UKV3 1341 aaKnown RBP17.99■□□□□ 0.47
PRDM2-214ENST00000505823 LTBP4Q8N2S1 1624 aa17.99■□□□□ 0.47
PRDM2-214ENST00000505823 TMEM2Q9UHN6 1383 aa17.99■□□□□ 0.47
PRDM2-214ENST00000505823 UNC13BO14795 1591 aa17.99■□□□□ 0.47
PRDM2-214ENST00000505823 UBR1Q8IWV7 1749 aa17.98■□□□□ 0.47
PRDM2-214ENST00000505823 CPS1P31327 1500 aa17.98■□□□□ 0.47
PRDM2-214ENST00000505823 PPP1R15AO75807 674 aaPredicted RBP17.97■□□□□ 0.47
PRDM2-214ENST00000505823 CHGAP10645 457 aaKnown RBP17.97■□□□□ 0.47
PRDM2-214ENST00000505823 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.97■□□□□ 0.47
PRDM2-214ENST00000505823 SLIT1O75093 1534 aa17.97■□□□□ 0.47
PRDM2-214ENST00000505823 KDM5AP29375 1690 aaKnown RBP17.96■□□□□ 0.47
PRDM2-214ENST00000505823 UBAP1LF5GYI3 381 aa17.96■□□□□ 0.47
PRDM2-214ENST00000505823 TOM1O60784 492 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms