RNA–Protein interactions for RNA: ENST00000504788.5

LMNB1-208, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 1,801 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-208ENST00000504788 SPAG9O60271 1321 aaKnown RBP7.6□□□□□ -1.19
LMNB1-208ENST00000504788 NAIPQ13075 1403 aa7.59□□□□□ -1.19
LMNB1-208ENST00000504788 A2MP01023 1474 aa7.59□□□□□ -1.19
LMNB1-208ENST00000504788 HFM1A2PYH4 1435 aa7.59□□□□□ -1.19
LMNB1-208ENST00000504788 DUOX2Q9NRD8 1548 aa7.59□□□□□ -1.19
LMNB1-208ENST00000504788 FAM50AQ14320 339 aaKnown RBP7.59□□□□□ -1.19
LMNB1-208ENST00000504788 VWDEQ8N2E2 1590 aa7.58□□□□□ -1.2
LMNB1-208ENST00000504788 ADAMTSL3P82987 1691 aa7.58□□□□□ -1.2
LMNB1-208ENST00000504788 DHX29Q7Z478 1369 aaKnown RBP7.58□□□□□ -1.2
LMNB1-208ENST00000504788 KIF15Q9NS87 1388 aa7.57□□□□□ -1.2
LMNB1-208ENST00000504788 UNC13BO14795 1591 aa7.57□□□□□ -1.2
LMNB1-208ENST00000504788 PRDM15P57071 1507 aaPredicted RBP7.57□□□□□ -1.2
LMNB1-208ENST00000504788 ERBINQ96RT1 1412 aa7.57□□□□□ -1.2
LMNB1-208ENST00000504788 ANKRD30AQ9BXX3 1397 aa7.56□□□□□ -1.2
LMNB1-208ENST00000504788 TSPY4P0CV99 314 aa7.56□□□□□ -1.2
LMNB1-208ENST00000504788 TSPY10P0CW01 314 aa7.56□□□□□ -1.2
LMNB1-208ENST00000504788 KDM5DQ9BY66 1539 aa7.55□□□□□ -1.2
LMNB1-208ENST00000504788 CHIC2Q9UKJ5 165 aa7.55□□□□□ -1.2
LMNB1-208ENST00000504788 ANKRD50Q9ULJ7 1429 aa7.55□□□□□ -1.2
LMNB1-208ENST00000504788 RRP7BPQ9NSQ0 103 aa7.54□□□□□ -1.2
LMNB1-208ENST00000504788 IQGAP3Q86VI3 1631 aa7.53□□□□□ -1.2
LMNB1-208ENST00000504788 MADDQ8WXG6 1647 aa7.53□□□□□ -1.2
LMNB1-208ENST00000504788 LMTK2Q8IWU2 1503 aa7.53□□□□□ -1.2
LMNB1-208ENST00000504788 FAM135AQ9P2D6 1515 aa7.53□□□□□ -1.2
LMNB1-208ENST00000504788 CEP152O94986 1710 aa7.53□□□□□ -1.2
LMNB1-208ENST00000504788 FER1L4A9Z1Z3 1794 aa7.53□□□□□ -1.2
LMNB1-208ENST00000504788 MROH2AA6NES4 1674 aa7.52□□□□□ -1.2
LMNB1-208ENST00000504788 ZC3H13Q5T200 1668 aaKnown RBP7.52□□□□□ -1.2
LMNB1-208ENST00000504788 ITGAEP38570 1179 aa7.52□□□□□ -1.2
LMNB1-208ENST00000504788 TRIM26Q12899 539 aaPredicted RBP7.52□□□□□ -1.2
LMNB1-208ENST00000504788 ABCC3O15438 1527 aa7.52□□□□□ -1.21
LMNB1-208ENST00000504788 CLTCQ00610 1675 aaKnown RBP7.51□□□□□ -1.21
LMNB1-208ENST00000504788 C3P01024 1663 aa7.51□□□□□ -1.21
LMNB1-208ENST00000504788 PZPP20742 1482 aa7.51□□□□□ -1.21
LMNB1-208ENST00000504788 CAMSAP1Q5T5Y3 1602 aa7.5□□□□□ -1.21
LMNB1-208ENST00000504788 KDM4FA0A1W2PPD8 638 aa7.5□□□□□ -1.21
LMNB1-208ENST00000504788 SETD5Q9C0A6 1442 aa7.5□□□□□ -1.21
LMNB1-208ENST00000504788 E9PCH4 1651 aa7.5□□□□□ -1.21
LMNB1-208ENST00000504788 TET3O43151 1660 aa7.5□□□□□ -1.21
LMNB1-208ENST00000504788 RAB3GAP2Q9H2M9 1393 aa7.5□□□□□ -1.21
LMNB1-208ENST00000504788 EFCAB6Q5THR3 1501 aa7.49□□□□□ -1.21
LMNB1-208ENST00000504788 RIMS1Q86UR5 1692 aaKnown RBP7.49□□□□□ -1.21
LMNB1-208ENST00000504788 KIF3BO15066 747 aa7.49□□□□□ -1.21
LMNB1-208ENST00000504788 HRCP23327 699 aa7.48□□□□□ -1.21
LMNB1-208ENST00000504788 ARHGAP31Q2M1Z3 1444 aa7.48□□□□□ -1.21
LMNB1-208ENST00000504788 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.48□□□□□ -1.215e-7■■■□□ 19
LMNB1-208ENST00000504788 NPATQ14207 1427 aa7.48□□□□□ -1.21
LMNB1-208ENST00000504788 PREX1Q8TCU6 1659 aa7.47□□□□□ -1.21
LMNB1-208ENST00000504788 SPATA31D1Q6ZQQ2 1576 aa7.47□□□□□ -1.21
LMNB1-208ENST00000504788 PTPRMP28827 1452 aa7.46□□□□□ -1.21
LMNB1-208ENST00000504788 SYNMO15061 1565 aa7.46□□□□□ -1.22
LMNB1-208ENST00000504788 PLA2R1Q13018 1463 aa7.46□□□□□ -1.22
LMNB1-208ENST00000504788 PIK3C2BO00750 1634 aa7.45□□□□□ -1.22
LMNB1-208ENST00000504788 GGT6Q6P531 493 aa7.45□□□□□ -1.22
LMNB1-208ENST00000504788 MYT1LQ9UL68 1186 aa7.45□□□□□ -1.22
LMNB1-208ENST00000504788 NOS1P29475 1434 aa7.45□□□□□ -1.22
LMNB1-208ENST00000504788 CNTLNQ9NXG0 1405 aa7.45□□□□□ -1.22
LMNB1-208ENST00000504788 CFAP65Q6ZU64 1925 aaKnown RBP7.45□□□□□ -1.22
LMNB1-208ENST00000504788 RPRD2Q5VT52 1461 aaKnown RBP7.45□□□□□ -1.22
LMNB1-208ENST00000504788 NUP155O75694 1391 aa7.44□□□□□ -1.22
LMNB1-208ENST00000504788 ZMYM3Q14202 1370 aa7.44□□□□□ -1.22
LMNB1-208ENST00000504788 SPHKAPQ2M3C7 1700 aa7.44□□□□□ -1.22
LMNB1-208ENST00000504788 PTPRTO14522 1441 aa7.44□□□□□ -1.22
LMNB1-208ENST00000504788 MLECQ14165 292 aa7.43□□□□□ -1.22
LMNB1-208ENST00000504788 PCGF6Q9BYE7 350 aa7.43□□□□□ -1.22
LMNB1-208ENST00000504788 SETD1BQ9UPS6 1966 aaKnown RBP7.43□□□□□ -1.22
LMNB1-208ENST00000504788 ARID4BQ4LE39 1312 aaPredicted RBP7.43□□□□□ -1.22
LMNB1-208ENST00000504788 ERVK-7P63135 1459 aa7.43□□□□□ -1.22
LMNB1-208ENST00000504788 ZNF142P52746 1687 aaPredicted RBP7.42□□□□□ -1.22
LMNB1-208ENST00000504788 DHX57Q6P158 1386 aaKnown RBP7.42□□□□□ -1.22
LMNB1-208ENST00000504788 MYO3AQ8NEV4 1616 aa7.42□□□□□ -1.22
LMNB1-208ENST00000504788 WASHC2CQ9Y4E1 1318 aa7.42□□□□□ -1.22
LMNB1-208ENST00000504788 UGGT1Q9NYU2 1555 aa7.41□□□□□ -1.22
LMNB1-208ENST00000504788 KDM5AP29375 1690 aaKnown RBP7.41□□□□□ -1.22
LMNB1-208ENST00000504788 CEBPAP49715 358 aaPredicted RBP7.41□□□□□ -1.22
LMNB1-208ENST00000504788 TRPM2O94759 1503 aa7.41□□□□□ -1.22
LMNB1-208ENST00000504788 CLTCL1P53675 1640 aa7.41□□□□□ -1.22
LMNB1-208ENST00000504788 FBXO31Q5XUX0 539 aaPredicted RBP7.41□□□□□ -1.22
LMNB1-208ENST00000504788 MPHOSPH9Q99550 1183 aa7.41□□□□□ -1.22
LMNB1-208ENST00000504788 MYO5BQ9ULV0 1848 aa7.4□□□□□ -1.22
LMNB1-208ENST00000504788 UBR1Q8IWV7 1749 aa7.4□□□□□ -1.22
LMNB1-208ENST00000504788 KANK1Q14678 1352 aa7.4□□□□□ -1.23
LMNB1-208ENST00000504788 TMEM131LA2VDJ0 1609 aa7.39□□□□□ -1.23
LMNB1-208ENST00000504788 ANKRD30BQ9BXX2 1392 aa7.39□□□□□ -1.23
LMNB1-208ENST00000504788 ACIN1Q9UKV3 1341 aaKnown RBP7.39□□□□□ -1.23
LMNB1-208ENST00000504788 NEURL4Q96JN8 1562 aa7.39□□□□□ -1.23
LMNB1-208ENST00000504788 LMTK3Q96Q04 1460 aa7.39□□□□□ -1.23
LMNB1-208ENST00000504788 CEP170BQ9Y4F5 1589 aaPredicted RBP7.38□□□□□ -1.23
LMNB1-208ENST00000504788 PKD2Q13563 968 aa7.38□□□□□ -1.23
LMNB1-208ENST00000504788 IFT172Q9UG01 1749 aa7.37□□□□□ -1.23
LMNB1-208ENST00000504788 ADGRB3O60242 1522 aa7.37□□□□□ -1.23
LMNB1-208ENST00000504788 SLC4A1APQ9BWU0 796 aaKnown RBP7.37□□□□□ -1.23
LMNB1-208ENST00000504788 SPATA31E1Q6ZUB1 1445 aa7.36□□□□□ -1.23
LMNB1-208ENST00000504788 NLRP1Q9C000 1473 aa7.36□□□□□ -1.23
LMNB1-208ENST00000504788 TRIM52Q96A61 297 aa7.36□□□□□ -1.23
LMNB1-208ENST00000504788 A2ML1A8K2U0 1454 aa7.36□□□□□ -1.23
LMNB1-208ENST00000504788 ARHGAP23Q9P227 1491 aa7.36□□□□□ -1.23
LMNB1-208ENST00000504788 KIF1BO60333 1816 aa7.36□□□□□ -1.23
LMNB1-208ENST00000504788 TNRQ92752 1358 aa7.35□□□□□ -1.23
LMNB1-208ENST00000504788 STRCQ7RTU9 1775 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms