RNA–Protein interactions for RNA: ENST00000504524.5

PLXND1-204, Transcript of plexin D1, humanhuman

TSL 1 (best)

Gene PLXND1, Length 1,701 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLXND1-204ENST00000504524 ABCA6Q8N139 1617 aa26.6■■□□□ 1.85
PLXND1-204ENST00000504524 FAM69CQ0P6D2 419 aa26.58■■□□□ 1.85
PLXND1-204ENST00000504524 PKD2Q13563 968 aa26.58■■□□□ 1.85
PLXND1-204ENST00000504524 MROH1Q8NDA8 1641 aa26.57■■□□□ 1.84
PLXND1-204ENST00000504524 BCORL1Q5H9F3 1711 aa26.55■■□□□ 1.84
PLXND1-204ENST00000504524 VWDEQ8N2E2 1590 aa26.54■■□□□ 1.84
PLXND1-204ENST00000504524 TEX14Q8IWB6 1497 aa26.54■■□□□ 1.84
PLXND1-204ENST00000504524 ZNF316A6NFI3 1004 aaPredicted RBP26.53■■□□□ 1.84
PLXND1-204ENST00000504524 PPP1R15AO75807 674 aaPredicted RBP26.53■■□□□ 1.84
PLXND1-204ENST00000504524 DHX29Q7Z478 1369 aaKnown RBP26.53■■□□□ 1.84
PLXND1-204ENST00000504524 PRDM15P57071 1507 aaPredicted RBP26.52■■□□□ 1.84
PLXND1-204ENST00000504524 RNF17Q9BXT8 1623 aaKnown RBP26.52■■□□□ 1.84
PLXND1-204ENST00000504524 DIP2CQ9Y2E4 1556 aa26.51■■□□□ 1.83
PLXND1-204ENST00000504524 ZMYM4Q5VZL5 1548 aa26.5■■□□□ 1.83
PLXND1-204ENST00000504524 A2MP01023 1474 aa26.5■■□□□ 1.83
PLXND1-204ENST00000504524 E9PCH4 1651 aa26.49■■□□□ 1.83
PLXND1-204ENST00000504524 TET3O43151 1660 aa26.49■■□□□ 1.83
PLXND1-204ENST00000504524 RAPGEF3O95398 923 aa26.45■■□□□ 1.83
PLXND1-204ENST00000504524 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.45■■□□□ 1.83
PLXND1-204ENST00000504524 MYT1LQ9UL68 1186 aa26.45■■□□□ 1.83
PLXND1-204ENST00000504524 CEP152O94986 1710 aa26.42■■□□□ 1.82
PLXND1-204ENST00000504524 PLA2R1Q13018 1463 aa26.42■■□□□ 1.82
PLXND1-204ENST00000504524 SPHKAPQ2M3C7 1700 aa26.4■■□□□ 1.82
PLXND1-204ENST00000504524 ATP10AO60312 1499 aa26.39■■□□□ 1.82
PLXND1-204ENST00000504524 L3MBTL2Q969R5 705 aa26.39■■□□□ 1.81
PLXND1-204ENST00000504524 KIF3BO15066 747 aa26.37■■□□□ 1.81
PLXND1-204ENST00000504524 YEATS2Q9ULM3 1422 aa26.37■■□□□ 1.81
PLXND1-204ENST00000504524 LMTK2Q8IWU2 1503 aa26.36■■□□□ 1.81
PLXND1-204ENST00000504524 KANK1Q14678 1352 aa26.34■■□□□ 1.81
PLXND1-204ENST00000504524 EFCAB6Q5THR3 1501 aa26.34■■□□□ 1.81
PLXND1-204ENST00000504524 TRPM2O94759 1503 aa26.32■■□□□ 1.8
PLXND1-204ENST00000504524 REREQ9P2R6 1566 aa26.3■■□□□ 1.8
PLXND1-204ENST00000504524 CCDC144AA2RUR9 1427 aa26.3■■□□□ 1.8
PLXND1-204ENST00000504524 COL17A1Q9UMD9 1497 aaPredicted RBP26.29■■□□□ 1.8
PLXND1-204ENST00000504524 PTPRTO14522 1441 aa26.27■■□□□ 1.8
PLXND1-204ENST00000504524 CLTCL1P53675 1640 aa26.27■■□□□ 1.8
PLXND1-204ENST00000504524 ZC3H13Q5T200 1668 aaKnown RBP26.26■■□□□ 1.79
PLXND1-204ENST00000504524 CAMSAP1Q5T5Y3 1602 aa26.25■■□□□ 1.79
PLXND1-204ENST00000504524 ABCC3O15438 1527 aa26.25■■□□□ 1.79
PLXND1-204ENST00000504524 DIEXFQ68CQ4 756 aaKnown RBP26.25■■□□□ 1.79
PLXND1-204ENST00000504524 ARHGEF40Q8TER5 1519 aa26.24■■□□□ 1.79
PLXND1-204ENST00000504524 SIGLEC1Q9BZZ2 1709 aa26.24■■□□□ 1.79
PLXND1-204ENST00000504524 NBPF8Q3BBV2 869 aa26.22■■□□□ 1.79
PLXND1-204ENST00000504524 UHRF1BP1Q6BDS2 1440 aa26.22■■□□□ 1.79
PLXND1-204ENST00000504524 AGLP35573 1532 aa26.19■■□□□ 1.78
PLXND1-204ENST00000504524 CFAP65Q6ZU64 1925 aaKnown RBP26.17■■□□□ 1.78
PLXND1-204ENST00000504524 SPATA31E1Q6ZUB1 1445 aa26.16■■□□□ 1.78
PLXND1-204ENST00000504524 KIF1BO60333 1816 aa26.15■■□□□ 1.78
PLXND1-204ENST00000504524 NEURL4Q96JN8 1562 aa26.15■■□□□ 1.78
PLXND1-204ENST00000504524 NPATQ14207 1427 aa26.14■■□□□ 1.77
PLXND1-204ENST00000504524 RALGAPBQ86X10 1494 aa26.13■■□□□ 1.77
PLXND1-204ENST00000504524 GGT6Q6P531 493 aa26.13■■□□□ 1.77
PLXND1-204ENST00000504524 TRPM1Q7Z4N2 1603 aa26.13■■□□□ 1.77
PLXND1-204ENST00000504524 UGGT1Q9NYU2 1555 aa26.12■■□□□ 1.77
PLXND1-204ENST00000504524 DNAJC5Q9H3Z4 198 aa26.11■■□□□ 1.77
PLXND1-204ENST00000504524 MROH2AA6NES4 1674 aa26.11■■□□□ 1.77
PLXND1-204ENST00000504524 IFT172Q9UG01 1749 aa26.08■■□□□ 1.77
PLXND1-204ENST00000504524 PRAG1Q86YV5 1406 aa26.07■■□□□ 1.76
PLXND1-204ENST00000504524 POLR1AO95602 1720 aaPredicted RBP26.06■■□□□ 1.76
PLXND1-204ENST00000504524 ARHGAP31Q2M1Z3 1444 aa26.06■■□□□ 1.76
PLXND1-204ENST00000504524 PIK3C2BO00750 1634 aa26.06■■□□□ 1.76
PLXND1-204ENST00000504524 DCAF11Q8TEB1 546 aa26.05■■□□□ 1.76
PLXND1-204ENST00000504524 HIRIP3Q9BW71 556 aaPredicted RBP26.05■■□□□ 1.76
PLXND1-204ENST00000504524 SYNMO15061 1565 aa26.05■■□□□ 1.76
PLXND1-204ENST00000504524 WASHC2CQ9Y4E1 1318 aa26.05■■□□□ 1.76
PLXND1-204ENST00000504524 PREX1Q8TCU6 1659 aa26.04■■□□□ 1.76
PLXND1-204ENST00000504524 MADDQ8WXG6 1647 aa26.04■■□□□ 1.76
PLXND1-204ENST00000504524 CNTLNQ9NXG0 1405 aa26.04■■□□□ 1.76
PLXND1-204ENST00000504524 NOS1P29475 1434 aa26.03■■□□□ 1.76
PLXND1-204ENST00000504524 CLTCQ00610 1675 aaKnown RBP26.03■■□□□ 1.76
PLXND1-204ENST00000504524 HSPA5P11021 654 aaKnown RBP26.02■■□□□ 1.76
PLXND1-204ENST00000504524 ADGRB3O60242 1522 aa26.02■■□□□ 1.76
PLXND1-204ENST00000504524 LAMC1P11047 1609 aa26.01■■□□□ 1.75
PLXND1-204ENST00000504524 RGL3Q3MIN7 710 aa26.01■■□□□ 1.75
PLXND1-204ENST00000504524 ZNF326Q5BKZ1 582 aaKnown RBP26■■□□□ 1.75
PLXND1-204ENST00000504524 KDM2AQ9Y2K7 1162 aa26■■□□□ 1.75
PLXND1-204ENST00000504524 EIF4G2P78344 907 aaKnown RBP eCLIP26■■□□□ 1.75
PLXND1-204ENST00000504524 PPLO60437 1756 aa25.96■■□□□ 1.75
PLXND1-204ENST00000504524 KIAA1210Q9ULL0 1709 aa25.93■■□□□ 1.74
PLXND1-204ENST00000504524 TRHP20396 242 aaPredicted RBP25.92■■□□□ 1.74
PLXND1-204ENST00000504524 USP47Q96K76 1375 aa25.92■■□□□ 1.74
PLXND1-204ENST00000504524 MYOM2P54296 1465 aa25.92■■□□□ 1.74
PLXND1-204ENST00000504524 MYO5BQ9ULV0 1848 aa25.91■■□□□ 1.74
PLXND1-204ENST00000504524 GPRASP1Q5JY77 1395 aa25.91■■□□□ 1.74
PLXND1-204ENST00000504524 PPP6R1Q9UPN7 881 aa25.91■■□□□ 1.74
PLXND1-204ENST00000504524 ERVK-7P63135 1459 aa25.88■■□□□ 1.73
PLXND1-204ENST00000504524 ROCK2O75116 1388 aaKnown RBP25.87■■□□□ 1.73
PLXND1-204ENST00000504524 MIER1Q8N108 512 aa25.86■■□□□ 1.73
PLXND1-204ENST00000504524 IQGAP1P46940 1657 aa25.86■■□□□ 1.73
PLXND1-204ENST00000504524 STAC3Q96MF2 364 aa25.85■■□□□ 1.73
PLXND1-204ENST00000504524 SPATA31D1Q6ZQQ2 1576 aa25.85■■□□□ 1.73
PLXND1-204ENST00000504524 NRXN1Q9ULB1 1477 aa25.84■■□□□ 1.73
PLXND1-204ENST00000504524 CARD11Q9BXL7 1154 aa25.84■■□□□ 1.73
PLXND1-204ENST00000504524 TMEM131LA2VDJ0 1609 aa25.84■■□□□ 1.73
PLXND1-204ENST00000504524 WASHC2AQ641Q2 1341 aa25.83■■□□□ 1.73
PLXND1-204ENST00000504524 DDX10Q13206 875 aaKnown RBP25.83■■□□□ 1.72
PLXND1-204ENST00000504524 NBPF1Q3BBV0 1214 aa25.8■■□□□ 1.72
PLXND1-204ENST00000504524 NEXMIFQ5QGS0 1516 aa25.8■■□□□ 1.72
PLXND1-204ENST00000504524 CCDC7Q96M83 1385 aa25.8■■□□□ 1.72
PLXND1-204ENST00000504524 C11orf95C9JLR9 678 aaPredicted RBP25.8■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms