RNA–Protein interactions for RNA: ENST00000504230.2

LINC00958-201, long intergenic non-protein coding RNA 958, humanhuman

TSL 2 BASIC

Gene LINC00958, Length 1,558 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00958-201ENST00000504230 SPAG9O60271 1321 aaKnown RBP16.49■□□□□ 0.23
LINC00958-201ENST00000504230 COL17A1Q9UMD9 1497 aaPredicted RBP16.49■□□□□ 0.23
LINC00958-201ENST00000504230 SHANK2Q9UPX8 1470 aa16.49■□□□□ 0.23
LINC00958-201ENST00000504230 MYT1LQ9UL68 1186 aa16.48■□□□□ 0.23
LINC00958-201ENST00000504230 RICTORQ6R327 1708 aa16.48■□□□□ 0.23
LINC00958-201ENST00000504230 C9orf84Q5VXU9 1444 aa16.47■□□□□ 0.23
LINC00958-201ENST00000504230 KDM5CP41229 1560 aa16.47■□□□□ 0.23
LINC00958-201ENST00000504230 FXR2P51116 673 aaKnown RBP eCLIP16.47■□□□□ 0.23
LINC00958-201ENST00000504230 CROCC2H7BZ55 1655 aa16.47■□□□□ 0.23
LINC00958-201ENST00000504230 CHIC2Q9UKJ5 165 aa16.46■□□□□ 0.23
LINC00958-201ENST00000504230 RTEL1-TNFRSF6BF6WH68 1400 aa16.46■□□□□ 0.22
LINC00958-201ENST00000504230 FRMPD1Q5SYB0 1578 aa16.46■□□□□ 0.22
LINC00958-201ENST00000504230 MAST1Q9Y2H9 1570 aa16.46■□□□□ 0.22
LINC00958-201ENST00000504230 SPDYE1Q8NFV5 336 aaPredicted RBP16.45■□□□□ 0.22
LINC00958-201ENST00000504230 MLH3Q9UHC1 1453 aa16.44■□□□□ 0.22
LINC00958-201ENST00000504230 PTPRKQ15262 1439 aa16.44■□□□□ 0.22
LINC00958-201ENST00000504230 MAGI2Q86UL8 1455 aa16.44■□□□□ 0.22
LINC00958-201ENST00000504230 ZMYM4Q5VZL5 1548 aa16.43■□□□□ 0.22
LINC00958-201ENST00000504230 ANKRD30AQ9BXX3 1397 aa16.43■□□□□ 0.22
LINC00958-201ENST00000504230 HECW2Q9P2P5 1572 aa16.43■□□□□ 0.22
LINC00958-201ENST00000504230 ATP7AQ04656 1500 aa16.43■□□□□ 0.22
LINC00958-201ENST00000504230 INO80Q9ULG1 1556 aaPredicted RBP16.42■□□□□ 0.22
LINC00958-201ENST00000504230 ZFYVE16Q7Z3T8 1539 aa16.42■□□□□ 0.22
LINC00958-201ENST00000504230 ROCK1Q13464 1354 aa16.42■□□□□ 0.22
LINC00958-201ENST00000504230 ADGRL2O95490 1459 aa16.41■□□□□ 0.22
LINC00958-201ENST00000504230 ADGBQ8N7X0 1667 aa16.4■□□□□ 0.22
LINC00958-201ENST00000504230 NCOA1Q15788 1441 aa16.39■□□□□ 0.21
LINC00958-201ENST00000504230 KIDINS220Q9ULH0 1771 aa16.39■□□□□ 0.21
LINC00958-201ENST00000504230 PLXNC1O60486 1568 aa16.38■□□□□ 0.21
LINC00958-201ENST00000504230 PCGF6Q9BYE7 350 aa16.38■□□□□ 0.21
LINC00958-201ENST00000504230 RRP7BPQ9NSQ0 103 aa16.38■□□□□ 0.21
LINC00958-201ENST00000504230 KIF15Q9NS87 1388 aa16.37■□□□□ 0.21
LINC00958-201ENST00000504230 CLEC11AQ9Y240 323 aa16.37■□□□□ 0.21
LINC00958-201ENST00000504230 YEATS2Q9ULM3 1422 aa16.35■□□□□ 0.21
LINC00958-201ENST00000504230 ARHGEF40Q8TER5 1519 aa16.35■□□□□ 0.21
LINC00958-201ENST00000504230 DIP2CQ9Y2E4 1556 aa16.34■□□□□ 0.21
LINC00958-201ENST00000504230 ABCA6Q8N139 1617 aa16.34■□□□□ 0.21
LINC00958-201ENST00000504230 HFM1A2PYH4 1435 aa16.34■□□□□ 0.21
LINC00958-201ENST00000504230 ATP10AO60312 1499 aa16.34■□□□□ 0.21
LINC00958-201ENST00000504230 DUOX2Q9NRD8 1548 aa16.34■□□□□ 0.21
LINC00958-201ENST00000504230 DHX29Q7Z478 1369 aaKnown RBP16.33■□□□□ 0.2
LINC00958-201ENST00000504230 A2MP01023 1474 aa16.33■□□□□ 0.2
LINC00958-201ENST00000504230 NAIPQ13075 1403 aa16.32■□□□□ 0.2
LINC00958-201ENST00000504230 ANKRD50Q9ULJ7 1429 aa16.31■□□□□ 0.2
LINC00958-201ENST00000504230 GCC2Q8IWJ2 1684 aa16.3■□□□□ 0.2
LINC00958-201ENST00000504230 SETD5Q9C0A6 1442 aa16.3■□□□□ 0.2
LINC00958-201ENST00000504230 ERBINQ96RT1 1412 aa16.3■□□□□ 0.2
LINC00958-201ENST00000504230 REREQ9P2R6 1566 aa16.29■□□□□ 0.2
LINC00958-201ENST00000504230 ACIN1Q9UKV3 1341 aaKnown RBP16.26■□□□□ 0.19
LINC00958-201ENST00000504230 EIF2AK4Q9P2K8 1649 aaKnown RBP16.25■□□□□ 0.19
LINC00958-201ENST00000504230 KIF3BO15066 747 aa16.25■□□□□ 0.19
LINC00958-201ENST00000504230 AGLP35573 1532 aa16.24■□□□□ 0.19
LINC00958-201ENST00000504230 HRCP23327 699 aa16.24■□□□□ 0.19
LINC00958-201ENST00000504230 RAB3GAP2Q9H2M9 1393 aa16.24■□□□□ 0.19
LINC00958-201ENST00000504230 ARID4BQ4LE39 1312 aaPredicted RBP16.23■□□□□ 0.19
LINC00958-201ENST00000504230 BCORL1Q5H9F3 1711 aa16.21■□□□□ 0.19
LINC00958-201ENST00000504230 PRKAR2AP13861 404 aaKnown RBP16.2■□□□□ 0.18
LINC00958-201ENST00000504230 GGT6Q6P531 493 aa16.2■□□□□ 0.18
LINC00958-201ENST00000504230 TRIM52Q96A61 297 aa16.19■□□□□ 0.18
LINC00958-201ENST00000504230 KANK1Q14678 1352 aa16.18■□□□□ 0.18
LINC00958-201ENST00000504230 SIGLEC1Q9BZZ2 1709 aa16.17■□□□□ 0.18
LINC00958-201ENST00000504230 RNF17Q9BXT8 1623 aaKnown RBP16.17■□□□□ 0.18
LINC00958-201ENST00000504230 MLECQ14165 292 aa16.17■□□□□ 0.18
LINC00958-201ENST00000504230 NUP155O75694 1391 aa16.16■□□□□ 0.18
LINC00958-201ENST00000504230 UNC13BO14795 1591 aa16.16■□□□□ 0.18
LINC00958-201ENST00000504230 DEPDC5O75140 1603 aa16.16■□□□□ 0.18
LINC00958-201ENST00000504230 HAX1O00165 279 aa16.16■□□□□ 0.18
LINC00958-201ENST00000504230 PRR29P0C7W0 189 aa16.15■□□□□ 0.18
LINC00958-201ENST00000504230 PRDM15P57071 1507 aaPredicted RBP16.15■□□□□ 0.18
LINC00958-201ENST00000504230 SP7Q8TDD2 431 aaPredicted RBP16.13■□□□□ 0.17
LINC00958-201ENST00000504230 ESF1Q9H501 851 aaKnown RBP16.13■□□□□ 0.17
LINC00958-201ENST00000504230 MROH1Q8NDA8 1641 aa16.13■□□□□ 0.17
LINC00958-201ENST00000504230 SPDYE4A6NLX3 237 aa16.13■□□□□ 0.17
LINC00958-201ENST00000504230 WASHC2CQ9Y4E1 1318 aa16.12■□□□□ 0.17
LINC00958-201ENST00000504230 KDM5DQ9BY66 1539 aa16.12■□□□□ 0.17
LINC00958-201ENST00000504230 FAM135AQ9P2D6 1515 aa16.12■□□□□ 0.17
LINC00958-201ENST00000504230 IQGAP3Q86VI3 1631 aa16.1■□□□□ 0.17
LINC00958-201ENST00000504230 VWDEQ8N2E2 1590 aa16.1■□□□□ 0.17
LINC00958-201ENST00000504230 ZC3H13Q5T200 1668 aaKnown RBP16.08■□□□□ 0.17
LINC00958-201ENST00000504230 LMTK2Q8IWU2 1503 aa16.08■□□□□ 0.16
LINC00958-201ENST00000504230 MPHOSPH9Q99550 1183 aa16.08■□□□□ 0.16
LINC00958-201ENST00000504230 ABCC3O15438 1527 aa16.07■□□□□ 0.16
LINC00958-201ENST00000504230 PZPP20742 1482 aa16.07■□□□□ 0.16
LINC00958-201ENST00000504230 CNTLNQ9NXG0 1405 aa16.07■□□□□ 0.16
LINC00958-201ENST00000504230 CEP152O94986 1710 aa16.05■□□□□ 0.16
LINC00958-201ENST00000504230 TET3O43151 1660 aa16.05■□□□□ 0.16
LINC00958-201ENST00000504230 CLTCQ00610 1675 aaKnown RBP16.04■□□□□ 0.16
LINC00958-201ENST00000504230 FER1L4A9Z1Z3 1794 aa16.04■□□□□ 0.16
LINC00958-201ENST00000504230 PKD2Q13563 968 aa16.04■□□□□ 0.16
LINC00958-201ENST00000504230 CHADLQ6NUI6 762 aa16.03■□□□□ 0.16
LINC00958-201ENST00000504230 ADAMTSL3P82987 1691 aa16.03■□□□□ 0.16
LINC00958-201ENST00000504230 EFCAB6Q5THR3 1501 aa16.03■□□□□ 0.16
LINC00958-201ENST00000504230 DHX57Q6P158 1386 aaKnown RBP16.03■□□□□ 0.16
LINC00958-201ENST00000504230 CAMSAP1Q5T5Y3 1602 aa16.03■□□□□ 0.16
LINC00958-201ENST00000504230 ARHGAP31Q2M1Z3 1444 aa16.01■□□□□ 0.15
LINC00958-201ENST00000504230 MADDQ8WXG6 1647 aa16.01■□□□□ 0.15
LINC00958-201ENST00000504230 ZMYM3Q14202 1370 aa16.01■□□□□ 0.15
LINC00958-201ENST00000504230 MROH2AA6NES4 1674 aa16■□□□□ 0.15
LINC00958-201ENST00000504230 RPRD2Q5VT52 1461 aaKnown RBP16■□□□□ 0.15
LINC00958-201ENST00000504230 NPATQ14207 1427 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms