RNA–Protein interactions for RNA: ENST00000503388.1

NDFIP1-202, Transcript of Nedd4 family interacting protein 1, humanhuman

TSL 2

Gene NDFIP1, Length 4,164 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDFIP1-202ENST00000503388 VPS8Q8N3P4 1428 aa6.51□□□□□ -1.37
NDFIP1-202ENST00000503388 MLH3Q9UHC1 1453 aa6.51□□□□□ -1.37
NDFIP1-202ENST00000503388 CLTCQ00610 1675 aaKnown RBP6.51□□□□□ -1.37
NDFIP1-202ENST00000503388 EIF5BO60841 1220 aaKnown RBP6.5□□□□□ -1.37
NDFIP1-202ENST00000503388 PLEKHH2Q8IVE3 1493 aa6.49□□□□□ -1.37
NDFIP1-202ENST00000503388 TRPM1Q7Z4N2 1603 aa6.49□□□□□ -1.37
NDFIP1-202ENST00000503388 EHBP1L1Q8N3D4 1523 aa6.49□□□□□ -1.37
NDFIP1-202ENST00000503388 RTL5Q5HYW3 569 aaPredicted RBP6.49□□□□□ -1.37
NDFIP1-202ENST00000503388 CHD2O14647 1828 aaKnown RBP6.48□□□□□ -1.37
NDFIP1-202ENST00000503388 PPARGC1BQ86YN6 1023 aaKnown RBP6.48□□□□□ -1.37
NDFIP1-202ENST00000503388 FMN1Q68DA7 1419 aa6.48□□□□□ -1.37
NDFIP1-202ENST00000503388 PPLO60437 1756 aa6.48□□□□□ -1.37
NDFIP1-202ENST00000503388 NEFMP07197 916 aa6.47□□□□□ -1.37
NDFIP1-202ENST00000503388 MED14O60244 1454 aa6.47□□□□□ -1.37
NDFIP1-202ENST00000503388 ADGRB2O60241 1585 aa6.47□□□□□ -1.37
NDFIP1-202ENST00000503388 LAMB1P07942 1786 aa6.47□□□□□ -1.37
NDFIP1-202ENST00000503388 AKNAQ7Z591 1439 aa6.47□□□□□ -1.37
NDFIP1-202ENST00000503388 NHSL1Q5SYE7 1610 aa6.46□□□□□ -1.37
NDFIP1-202ENST00000503388 PLCH1Q4KWH8 1693 aa6.46□□□□□ -1.37
NDFIP1-202ENST00000503388 PEAK1Q9H792 1746 aa6.46□□□□□ -1.37
NDFIP1-202ENST00000503388 TSPY4P0CV99 314 aa6.46□□□□□ -1.37
NDFIP1-202ENST00000503388 TSPY10P0CW01 314 aa6.46□□□□□ -1.37
NDFIP1-202ENST00000503388 CAMTA1Q9Y6Y1 1673 aa6.46□□□□□ -1.38
NDFIP1-202ENST00000503388 CDCA8Q53HL2 280 aa6.46□□□□□ -1.38
NDFIP1-202ENST00000503388 SHPRHQ149N8 1683 aa6.46□□□□□ -1.38
NDFIP1-202ENST00000503388 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP6.46□□□□□ -1.38
NDFIP1-202ENST00000503388 TEX14Q8IWB6 1497 aa6.45□□□□□ -1.38
NDFIP1-202ENST00000503388 LTBP4Q8N2S1 1624 aa6.45□□□□□ -1.38
NDFIP1-202ENST00000503388 CDC42BPGQ6DT37 1551 aa6.45□□□□□ -1.38
NDFIP1-202ENST00000503388 ZNF831Q5JPB2 1677 aa6.45□□□□□ -1.38
NDFIP1-202ENST00000503388 FOXD1Q16676 465 aa6.44□□□□□ -1.38
NDFIP1-202ENST00000503388 ERICH6BQ5W0A0 696 aa6.44□□□□□ -1.38
NDFIP1-202ENST00000503388 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.44□□□□□ -1.38
NDFIP1-202ENST00000503388 SLIT1O75093 1534 aa6.44□□□□□ -1.38
NDFIP1-202ENST00000503388 ARID4BQ4LE39 1312 aaPredicted RBP6.44□□□□□ -1.38
NDFIP1-202ENST00000503388 CARMIL1Q5VZK9 1371 aa6.44□□□□□ -1.38
NDFIP1-202ENST00000503388 CCNB3Q8WWL7 1395 aa6.43□□□□□ -1.38
NDFIP1-202ENST00000503388 ATP10AO60312 1499 aa6.43□□□□□ -1.38
NDFIP1-202ENST00000503388 NPM1P06748 294 aaKnown RBP eCLIP6.43□□□□□ -1.38
NDFIP1-202ENST00000503388 RTEL1-TNFRSF6BF6WH68 1400 aa6.42□□□□□ -1.38
NDFIP1-202ENST00000503388 PLA2R1Q13018 1463 aa6.42□□□□□ -1.38
NDFIP1-202ENST00000503388 ZBTB47Q9UFB7 747 aaPredicted RBP6.42□□□□□ -1.38
NDFIP1-202ENST00000503388 KIAA1107Q9UPP5 1409 aa6.42□□□□□ -1.38
NDFIP1-202ENST00000503388 NEUROD1Q13562 356 aa6.42□□□□□ -1.38
NDFIP1-202ENST00000503388 MST1RQ04912 1400 aa6.42□□□□□ -1.38
NDFIP1-202ENST00000503388 CARMIL2Q6F5E8 1435 aa6.41□□□□□ -1.38
NDFIP1-202ENST00000503388 EIF4G2P78344 907 aaKnown RBP eCLIP6.41□□□□□ -1.38
NDFIP1-202ENST00000503388 RSPH4AQ5TD94 716 aa6.41□□□□□ -1.38
NDFIP1-202ENST00000503388 CASKIN1Q8WXD9 1431 aa6.4□□□□□ -1.38
NDFIP1-202ENST00000503388 ARHGAP35Q9NRY4 1499 aa6.4□□□□□ -1.38
NDFIP1-202ENST00000503388 PLEKHD1A6NEE1 506 aa6.4□□□□□ -1.38
NDFIP1-202ENST00000503388 GTF3C3Q9Y5Q9 886 aa6.4□□□□□ -1.39
NDFIP1-202ENST00000503388 NALCNQ8IZF0 1738 aa6.39□□□□□ -1.39
NDFIP1-202ENST00000503388 ANP32AP39687 249 aaKnown RBP6.39□□□□□ -1.39
NDFIP1-202ENST00000503388 CCER2I3L3R5 266 aa6.39□□□□□ -1.39
NDFIP1-202ENST00000503388 ALS2Q96Q42 1657 aa6.39□□□□□ -1.39
NDFIP1-202ENST00000503388 POLR3GLQ9BT43 218 aa6.39□□□□□ -1.39
NDFIP1-202ENST00000503388 GPATCH8Q9UKJ3 1502 aaKnown RBP6.39□□□□□ -1.39
NDFIP1-202ENST00000503388 ARHGAP23Q9P227 1491 aa6.38□□□□□ -1.39
NDFIP1-202ENST00000503388 CHMP7Q8WUX9 453 aaPredicted RBP6.38□□□□□ -1.39
NDFIP1-202ENST00000503388 SETBP1Q9Y6X0 1596 aa6.38□□□□□ -1.39
NDFIP1-202ENST00000503388 SETD5Q9C0A6 1442 aa6.38□□□□□ -1.39
NDFIP1-202ENST00000503388 NPATQ14207 1427 aa6.37□□□□□ -1.39
NDFIP1-202ENST00000503388 ANP32EQ9BTT0 268 aa6.37□□□□□ -1.39
NDFIP1-202ENST00000503388 NRKQ7Z2Y5 1582 aa6.37□□□□□ -1.39
NDFIP1-202ENST00000503388 ARHGAP31Q2M1Z3 1444 aa6.37□□□□□ -1.39
NDFIP1-202ENST00000503388 UACAQ9BZF9 1416 aa6.37□□□□□ -1.39
NDFIP1-202ENST00000503388 E9PCH4 1651 aa6.36□□□□□ -1.39
NDFIP1-202ENST00000503388 PTPRGP23470 1445 aa6.36□□□□□ -1.39
NDFIP1-202ENST00000503388 CHMP4BQ9H444 224 aaKnown RBP6.36□□□□□ -1.39
NDFIP1-202ENST00000503388 MSH5O43196 834 aa6.36□□□□□ -1.39
NDFIP1-202ENST00000503388 ATP10BO94823 1461 aa6.36□□□□□ -1.39
NDFIP1-202ENST00000503388 MBD5Q9P267 1494 aa6.36□□□□□ -1.39
NDFIP1-202ENST00000503388 STAC3Q96MF2 364 aa6.36□□□□□ -1.39
NDFIP1-202ENST00000503388 NRXN1Q9ULB1 1477 aa6.35□□□□□ -1.39
NDFIP1-202ENST00000503388 UPF2Q9HAU5 1272 aaKnown RBP6.35□□□□□ -1.39
NDFIP1-202ENST00000503388 FBLN2P98095 1184 aa6.34□□□□□ -1.39
NDFIP1-202ENST00000503388 ROCK2O75116 1388 aaKnown RBP6.34□□□□□ -1.39
NDFIP1-202ENST00000503388 ABCC6O95255 1503 aa6.34□□□□□ -1.39
NDFIP1-202ENST00000503388 TRPM3Q9HCF6 1732 aaPredicted RBP6.34□□□□□ -1.4
NDFIP1-202ENST00000503388 POGZQ7Z3K3 1410 aa6.33□□□□□ -1.4
NDFIP1-202ENST00000503388 CFAP44Q96MT7 982 aa6.33□□□□□ -1.4
NDFIP1-202ENST00000503388 MYO5BQ9ULV0 1848 aa6.33□□□□□ -1.4
NDFIP1-202ENST00000503388 MED1Q15648 1581 aaPredicted RBP6.33□□□□□ -1.4
NDFIP1-202ENST00000503388 MS4A1P11836 297 aa6.33□□□□□ -1.4
NDFIP1-202ENST00000503388 KIF1AQ12756 1690 aa6.33□□□□□ -1.4
NDFIP1-202ENST00000503388 KANK1Q14678 1352 aa6.32□□□□□ -1.4
NDFIP1-202ENST00000503388 P3H3Q8IVL6 736 aa6.32□□□□□ -1.4
NDFIP1-202ENST00000503388 TMC1Q8TDI8 760 aa6.32□□□□□ -1.4
NDFIP1-202ENST00000503388 DDRGK1Q96HY6 314 aa6.32□□□□□ -1.4
NDFIP1-202ENST00000503388 PNNQ9H307 717 aaKnown RBP6.32□□□□□ -1.4
NDFIP1-202ENST00000503388 ESF1Q9H501 851 aaKnown RBP6.32□□□□□ -1.4
NDFIP1-202ENST00000503388 NRAPQ86VF7 1730 aa6.32□□□□□ -1.4
NDFIP1-202ENST00000503388 CFDP1Q9UEE9 299 aaPredicted RBP6.32□□□□□ -1.4
NDFIP1-202ENST00000503388 CANXP27824 592 aaKnown RBP6.31□□□□□ -1.4
NDFIP1-202ENST00000503388 SLC4A1APQ9BWU0 796 aaKnown RBP6.31□□□□□ -1.4
NDFIP1-202ENST00000503388 CDK13Q14004 1512 aaKnown RBP6.31□□□□□ -1.4
NDFIP1-202ENST00000503388 LMO7Q8WWI1 1683 aa6.31□□□□□ -1.4
NDFIP1-202ENST00000503388 CD109Q6YHK3 1445 aa6.31□□□□□ -1.4
NDFIP1-202ENST00000503388 HAP1P54257 671 aaPredicted RBP6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms