RNA–Protein interactions for RNA: ENST00000499038.2

UBE2B-202, Transcript of ubiquitin conjugating enzyme E2 B, humanhuman

TSL 3

Gene UBE2B, Length 682 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2B-202ENST00000499038 SLC4A5Q9BY07 1137 aa11.53□□□□□ -0.56
UBE2B-202ENST00000499038 ARIH1Q9Y4X5 557 aaPredicted RBP11.53□□□□□ -0.56
UBE2B-202ENST00000499038 PPP1R3GB7ZBB8 358 aa11.52□□□□□ -0.57
UBE2B-202ENST00000499038 NBR1Q14596 966 aa11.52□□□□□ -0.57
UBE2B-202ENST00000499038 RBM33Q96EV2 1170 aaKnown RBP11.52□□□□□ -0.57
UBE2B-202ENST00000499038 ZBED2Q9BTP6 218 aa11.51□□□□□ -0.57
UBE2B-202ENST00000499038 GRXCR2A6NFK2 248 aa11.48□□□□□ -0.57
UBE2B-202ENST00000499038 MAP3K7O43318 606 aa11.48□□□□□ -0.57
UBE2B-202ENST00000499038 C6orf132Q5T0Z8 1188 aa11.48□□□□□ -0.57
UBE2B-202ENST00000499038 COL9A1P20849 921 aa11.47□□□□□ -0.57
UBE2B-202ENST00000499038 NBPF3Q9H094 633 aa11.46□□□□□ -0.57
UBE2B-202ENST00000499038 EN1Q05925 392 aaPredicted RBP11.45□□□□□ -0.58
UBE2B-202ENST00000499038 KCTD12Q96CX2 325 aaKnown RBP11.45□□□□□ -0.58
UBE2B-202ENST00000499038 HAP1P54257 671 aaPredicted RBP11.44□□□□□ -0.58
UBE2B-202ENST00000499038 PROX2Q3B8N5 592 aa11.44□□□□□ -0.58
UBE2B-202ENST00000499038 MRPL50Q8N5N7 158 aaKnown RBP11.44□□□□□ -0.58
UBE2B-202ENST00000499038 KCNV2Q8TDN2 545 aa11.44□□□□□ -0.58
UBE2B-202ENST00000499038 ARHGEF1Q92888 912 aaKnown RBP11.44□□□□□ -0.58
UBE2B-202ENST00000499038 GOLGA8CPA6NN73 597 aa11.43□□□□□ -0.58
UBE2B-202ENST00000499038 BHMG1C9JSJ3 638 aaPredicted RBP11.42□□□□□ -0.58
UBE2B-202ENST00000499038 P3H3Q8IVL6 736 aa11.42□□□□□ -0.58
UBE2B-202ENST00000499038 HCSTQ9UBK5 93 aa11.42□□□□□ -0.58
UBE2B-202ENST00000499038 TSR1Q2NL82 804 aaKnown RBP11.41□□□□□ -0.58
UBE2B-202ENST00000499038 RABGEF1Q9UJ41 708 aa11.41□□□□□ -0.58
UBE2B-202ENST00000499038 KIAA1468Q9P260 1216 aa11.37□□□□□ -0.59
UBE2B-202ENST00000499038 TRIM6-TRIM34B2RNG4 842 aa11.36□□□□□ -0.59
UBE2B-202ENST00000499038 ONECUT3O60422 494 aaPredicted RBP11.36□□□□□ -0.59
UBE2B-202ENST00000499038 OSBPP22059 807 aa11.36□□□□□ -0.59
UBE2B-202ENST00000499038 WNT2BQ93097 391 aa11.36□□□□□ -0.59
UBE2B-202ENST00000499038 PRIM1P49642 420 aaKnown RBP11.35□□□□□ -0.59
UBE2B-202ENST00000499038 PTPN5P54829 565 aa11.33□□□□□ -0.6
UBE2B-202ENST00000499038 CERKQ8TCT0 537 aa11.33□□□□□ -0.6
UBE2B-202ENST00000499038 THSD4Q6ZMP0 1018 aa11.32□□□□□ -0.6
UBE2B-202ENST00000499038 LAPTM4BQ86VI4 370 aa11.32□□□□□ -0.6
UBE2B-202ENST00000499038 PACS2Q86VP3 889 aa11.32□□□□□ -0.6
UBE2B-202ENST00000499038 ANKK1Q8NFD2 765 aa11.32□□□□□ -0.6
UBE2B-202ENST00000499038 MLLT3P42568 568 aaPredicted RBP11.31□□□□□ -0.6
UBE2B-202ENST00000499038 SEPT9Q9UHD8 586 aaPredicted RBP11.31□□□□□ -0.6
UBE2B-202ENST00000499038 CDHR5Q9HBB8 845 aa11.3□□□□□ -0.6
UBE2B-202ENST00000499038 PRSS12P56730 875 aa11.29□□□□□ -0.6
UBE2B-202ENST00000499038 CDCA7LQ96GN5 454 aa11.29□□□□□ -0.6
UBE2B-202ENST00000499038 TSKSQ9UJT2 592 aa11.29□□□□□ -0.6
UBE2B-202ENST00000499038 FAM98CQ17RN3 349 aaKnown RBP11.27□□□□□ -0.61
UBE2B-202ENST00000499038 ZFRQ96KR1 1074 aaKnown RBP11.27□□□□□ -0.61
UBE2B-202ENST00000499038 NBPF26B4DH59 902 aa11.24□□□□□ -0.61
UBE2B-202ENST00000499038 SEMA3EO15041 775 aa11.24□□□□□ -0.61
UBE2B-202ENST00000499038 PLA2G2EQ9NZK7 142 aa11.24□□□□□ -0.61
UBE2B-202ENST00000499038 BCAMP50895 628 aa11.23□□□□□ -0.61
UBE2B-202ENST00000499038 SOWAHBA6NEL2 793 aa11.22□□□□□ -0.61
UBE2B-202ENST00000499038 RBM27Q9P2N5 1060 aaKnown RBP11.22□□□□□ -0.61
UBE2B-202ENST00000499038 SMAPO00193 183 aa11.21□□□□□ -0.61
UBE2B-202ENST00000499038 LRCH3Q96II8 777 aa11.21□□□□□ -0.61
UBE2B-202ENST00000499038 FAM198AQ9UFP1 575 aa11.21□□□□□ -0.61
UBE2B-202ENST00000499038 PNMA3Q9UL41 463 aa11.21□□□□□ -0.61
UBE2B-202ENST00000499038 TATDN2Q93075 761 aa11.2□□□□□ -0.62
UBE2B-202ENST00000499038 KDM2AQ9Y2K7 1162 aa11.2□□□□□ -0.62
UBE2B-202ENST00000499038 NUTM2FA1L443 756 aa11.19□□□□□ -0.62
UBE2B-202ENST00000499038 PADI6Q6TGC4 694 aa11.19□□□□□ -0.62
UBE2B-202ENST00000499038 NPDC1Q9NQX5 325 aaPredicted RBP11.19□□□□□ -0.62
UBE2B-202ENST00000499038 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.19□□□□□ -0.62
UBE2B-202ENST00000499038 VSIG10Q8N0Z9 540 aa11.18□□□□□ -0.62
UBE2B-202ENST00000499038 SMYD5Q6GMV2 418 aa11.17□□□□□ -0.62
UBE2B-202ENST00000499038 NUDT18Q6ZVK8 323 aa11.17□□□□□ -0.62
UBE2B-202ENST00000499038 PTGDRQ13258 359 aa11.15□□□□□ -0.62
UBE2B-202ENST00000499038 HPS5Q9UPZ3 1129 aa11.15□□□□□ -0.62
UBE2B-202ENST00000499038 TESPA1A2RU30 521 aaPredicted RBP11.14□□□□□ -0.63
UBE2B-202ENST00000499038 C3orf80F5H4A9 247 aa11.14□□□□□ -0.63
UBE2B-202ENST00000499038 HDGFP51858 240 aaKnown RBP11.13□□□□□ -0.63
UBE2B-202ENST00000499038 NYAP1Q6ZVC0 841 aa11.13□□□□□ -0.63
UBE2B-202ENST00000499038 SAMD7Q7Z3H4 446 aa11.13□□□□□ -0.63
UBE2B-202ENST00000499038 TTC13Q8NBP0 860 aa11.13□□□□□ -0.63
UBE2B-202ENST00000499038 WBP1LQ9NX94 342 aa11.13□□□□□ -0.63
UBE2B-202ENST00000499038 TSR3Q9UJK0 312 aaKnown RBP11.13□□□□□ -0.63
UBE2B-202ENST00000499038 RNF40O75150 1001 aa11.11□□□□□ -0.63
UBE2B-202ENST00000499038 FCHSD2O94868 740 aa11.11□□□□□ -0.63
UBE2B-202ENST00000499038 PPP4CP60510 307 aa11.09□□□□□ -0.63
UBE2B-202ENST00000499038 RBM26Q5T8P6 1007 aaKnown RBP11.08□□□□□ -0.64
UBE2B-202ENST00000499038 SLC4A3P48751 1232 aa11.05□□□□□ -0.64
UBE2B-202ENST00000499038 RBM46Q8TBY0 533 aaKnown RBP11.05□□□□□ -0.64
UBE2B-202ENST00000499038 EYA1Q99502 592 aa11.04□□□□□ -0.64
UBE2B-202ENST00000499038 SWT1Q5T5J6 900 aaKnown RBP11.03□□□□□ -0.64
UBE2B-202ENST00000499038 TULP1O00294 542 aaPredicted RBP11.02□□□□□ -0.65
UBE2B-202ENST00000499038 HIC1Q14526 733 aa11.02□□□□□ -0.65
UBE2B-202ENST00000499038 IFFO2Q5TF58 517 aa11.02□□□□□ -0.65
UBE2B-202ENST00000499038 SLF2Q8IX21 1173 aa11.02□□□□□ -0.65
UBE2B-202ENST00000499038 NECTIN2Q92692 538 aa11.02□□□□□ -0.65
UBE2B-202ENST00000499038 ADGRG1Q9Y653 693 aa11.02□□□□□ -0.65
UBE2B-202ENST00000499038 ITGBL1O95965 494 aaPredicted RBP11.01□□□□□ -0.65
UBE2B-202ENST00000499038 DNAJB2P25686 324 aa11□□□□□ -0.65
UBE2B-202ENST00000499038 FAM161AQ3B820 660 aa11□□□□□ -0.65
UBE2B-202ENST00000499038 KCNC4Q03721 635 aa10.99□□□□□ -0.65
UBE2B-202ENST00000499038 GPIHBP1Q8IV16 184 aa10.99□□□□□ -0.65
UBE2B-202ENST00000499038 GNPATO15228 680 aa10.97□□□□□ -0.65
UBE2B-202ENST00000499038 A0A0G2JS52 829 aa10.96□□□□□ -0.65
UBE2B-202ENST00000499038 RCCD1A6NED2 376 aa10.96□□□□□ -0.65
UBE2B-202ENST00000499038 OATP04181 439 aa10.95□□□□□ -0.66
UBE2B-202ENST00000499038 GPR37O15354 613 aa10.94□□□□□ -0.66
UBE2B-202ENST00000499038 APLP1P51693 650 aa10.94□□□□□ -0.66
UBE2B-202ENST00000499038 TMEM134Q9H6X4 195 aa10.94□□□□□ -0.66
UBE2B-202ENST00000499038 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms