RNA–Protein interactions for RNA: ENST00000498731.5

SOX2-OT-218, SOX2 overlapping transcript, humanhuman

TSL 1 (best) BASIC

Gene SOX2-OT, Length 3,576 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-218ENST00000498731 NFKBIBQ15653 356 aa7.73□□□□□ -1.17
SOX2-OT-218ENST00000498731 PRDM4Q9UKN5 801 aa7.73□□□□□ -1.17
SOX2-OT-218ENST00000498731 HSP90AA2PQ14568 343 aaPredicted RBP7.72□□□□□ -1.17
SOX2-OT-218ENST00000498731 CCDC9Q9Y3X0 531 aaKnown RBP7.72□□□□□ -1.17
SOX2-OT-218ENST00000498731 PLB1Q6P1J6 1458 aa7.72□□□□□ -1.17
SOX2-OT-218ENST00000498731 KIAA0586Q9BVV6 1533 aa7.72□□□□□ -1.17
SOX2-OT-218ENST00000498731 HNRNPMP52272 730 aaKnown RBP eCLIP7.72□□□□□ -1.17
SOX2-OT-218ENST00000498731 FAM43AQ8N2R8 423 aa7.72□□□□□ -1.17
SOX2-OT-218ENST00000498731 AKNAQ7Z591 1439 aa7.72□□□□□ -1.17
SOX2-OT-218ENST00000498731 ANP32CO43423 234 aa7.71□□□□□ -1.17
SOX2-OT-218ENST00000498731 TSPY4P0CV99 314 aa7.71□□□□□ -1.17
SOX2-OT-218ENST00000498731 TSPY10P0CW01 314 aa7.71□□□□□ -1.17
SOX2-OT-218ENST00000498731 NUP160Q12769 1436 aa7.71□□□□□ -1.17
SOX2-OT-218ENST00000498731 GLIPR1L2Q4G1C9 344 aa7.71□□□□□ -1.18
SOX2-OT-218ENST00000498731 CCER2I3L3R5 266 aa7.7□□□□□ -1.18
SOX2-OT-218ENST00000498731 MYOM3Q5VTT5 1437 aa7.7□□□□□ -1.18
SOX2-OT-218ENST00000498731 EPRSP07814 1512 aaKnown RBP7.7□□□□□ -1.18
SOX2-OT-218ENST00000498731 FRAT2O75474 233 aaPredicted RBP7.7□□□□□ -1.18
SOX2-OT-218ENST00000498731 HSP90B1P14625 803 aaKnown RBP7.7□□□□□ -1.18
SOX2-OT-218ENST00000498731 NAP1L5Q96NT1 182 aaPredicted RBP7.69□□□□□ -1.18
SOX2-OT-218ENST00000498731 ZNF692Q9BU19 519 aaPredicted RBP7.69□□□□□ -1.18
SOX2-OT-218ENST00000498731 FOXD4L5Q5VV16 416 aaPredicted RBP7.69□□□□□ -1.18
SOX2-OT-218ENST00000498731 TMED8Q6PL24 325 aaPredicted RBP7.69□□□□□ -1.18
SOX2-OT-218ENST00000498731 FOXD4L4Q8WXT5 416 aaPredicted RBP7.69□□□□□ -1.18
SOX2-OT-218ENST00000498731 CLASP1Q7Z460 1538 aa7.68□□□□□ -1.18
SOX2-OT-218ENST00000498731 CCDC18Q5T9S5 1454 aa7.68□□□□□ -1.18
SOX2-OT-218ENST00000498731 PTPRKQ15262 1439 aa7.67□□□□□ -1.18
SOX2-OT-218ENST00000498731 MAPKBP1O60336 1514 aa7.67□□□□□ -1.18
SOX2-OT-218ENST00000498731 MPHOSPH9Q99550 1183 aa7.67□□□□□ -1.18
SOX2-OT-218ENST00000498731 FAM9BQ8IZU0 186 aa7.67□□□□□ -1.18
SOX2-OT-218ENST00000498731 MLECQ14165 292 aa7.66□□□□□ -1.18
SOX2-OT-218ENST00000498731 CHMP4BQ9H444 224 aaKnown RBP7.66□□□□□ -1.18
SOX2-OT-218ENST00000498731 USP35Q9P2H5 1018 aa7.66□□□□□ -1.18
SOX2-OT-218ENST00000498731 POGKQ9P215 609 aa7.66□□□□□ -1.18
SOX2-OT-218ENST00000498731 MAP3K1Q13233 1512 aa7.65□□□□□ -1.18
SOX2-OT-218ENST00000498731 DISP1Q96F81 1524 aa7.65□□□□□ -1.18
SOX2-OT-218ENST00000498731 DMRT2Q9Y5R5 561 aa7.65□□□□□ -1.18
SOX2-OT-218ENST00000498731 PUS7Q96PZ0 661 aaKnown RBP7.65□□□□□ -1.19
SOX2-OT-218ENST00000498731 MAGI3Q5TCQ9 1506 aa7.65□□□□□ -1.19
SOX2-OT-218ENST00000498731 HECW1Q76N89 1606 aa7.64□□□□□ -1.19
SOX2-OT-218ENST00000498731 RGL3Q3MIN7 710 aa7.64□□□□□ -1.19
SOX2-OT-218ENST00000498731 MTMR7Q9Y216 660 aa7.64□□□□□ -1.19
SOX2-OT-218ENST00000498731 PDE4AP27815 886 aa7.64□□□□□ -1.19
SOX2-OT-218ENST00000498731 SAMD9Q5K651 1589 aa7.64□□□□□ -1.19
SOX2-OT-218ENST00000498731 EHBP1L1Q8N3D4 1523 aa7.64□□□□□ -1.19
SOX2-OT-218ENST00000498731 ZFP91Q96JP5 570 aaPredicted RBP7.64□□□□□ -1.19
SOX2-OT-218ENST00000498731 TSPOAP1O95153 1857 aa7.63□□□□□ -1.19
SOX2-OT-218ENST00000498731 NUP153P49790 1475 aaKnown RBP7.63□□□□□ -1.19
SOX2-OT-218ENST00000498731 RAPGEF3O95398 923 aa7.63□□□□□ -1.19
SOX2-OT-218ENST00000498731 SUPT6HQ7KZ85 1726 aaKnown RBP7.63□□□□□ -1.19
SOX2-OT-218ENST00000498731 RRP9O43818 475 aaKnown RBP7.63□□□□□ -1.19
SOX2-OT-218ENST00000498731 HSP90AA1P07900 732 aaKnown RBP7.63□□□□□ -1.19
SOX2-OT-218ENST00000498731 PANK2Q9BZ23 570 aa7.63□□□□□ -1.19
SOX2-OT-218ENST00000498731 UACAQ9BZF9 1416 aa7.63□□□□□ -1.19
SOX2-OT-218ENST00000498731 CFAP43Q8NDM7 1665 aa7.62□□□□□ -1.19
SOX2-OT-218ENST00000498731 UGGT2Q9NYU1 1516 aa7.62□□□□□ -1.19
SOX2-OT-218ENST00000498731 KIAA0556O60303 1618 aa7.62□□□□□ -1.19
SOX2-OT-218ENST00000498731 GTF2E1P29083 439 aaPredicted RBP7.62□□□□□ -1.19
SOX2-OT-218ENST00000498731 IFNLR1Q8IU57 520 aaPredicted RBP7.62□□□□□ -1.19
SOX2-OT-218ENST00000498731 NAIPQ13075 1403 aa7.62□□□□□ -1.19
SOX2-OT-218ENST00000498731 ASXL2Q76L83 1435 aa7.62□□□□□ -1.19
SOX2-OT-218ENST00000498731 L3MBTL2Q969R5 705 aa7.61□□□□□ -1.19
SOX2-OT-218ENST00000498731 TROQ12816 1431 aaPredicted RBP7.61□□□□□ -1.19
SOX2-OT-218ENST00000498731 RGS22Q8NE09 1264 aa7.61□□□□□ -1.19
SOX2-OT-218ENST00000498731 ZHX1Q9UKY1 873 aaPredicted RBP7.61□□□□□ -1.19
SOX2-OT-218ENST00000498731 PTPN23Q9H3S7 1636 aa7.61□□□□□ -1.19
SOX2-OT-218ENST00000498731 MAPK8IP2Q13387 824 aaPredicted RBP7.6□□□□□ -1.19
SOX2-OT-218ENST00000498731 ERBB4Q15303 1308 aa7.6□□□□□ -1.19
SOX2-OT-218ENST00000498731 PPM1GO15355 546 aaPredicted RBP7.6□□□□□ -1.19
SOX2-OT-218ENST00000498731 BBXQ8WY36 941 aaPredicted RBP7.6□□□□□ -1.19
SOX2-OT-218ENST00000498731 BACH2Q9BYV9 841 aa7.6□□□□□ -1.19
SOX2-OT-218ENST00000498731 NUP155O75694 1391 aa7.6□□□□□ -1.19
SOX2-OT-218ENST00000498731 RAPGEF6Q8TEU7 1601 aa7.59□□□□□ -1.19
SOX2-OT-218ENST00000498731 HFM1A2PYH4 1435 aa7.59□□□□□ -1.19
SOX2-OT-218ENST00000498731 ATP10BO94823 1461 aa7.59□□□□□ -1.19
SOX2-OT-218ENST00000498731 PRDM10Q9NQV6 1147 aa7.59□□□□□ -1.2
SOX2-OT-218ENST00000498731 RAD21O60216 631 aa7.58□□□□□ -1.2
SOX2-OT-218ENST00000498731 ANKRD30AQ9BXX3 1397 aa7.58□□□□□ -1.2
SOX2-OT-218ENST00000498731 NAP1L2Q9ULW6 460 aaPredicted RBP7.58□□□□□ -1.2
SOX2-OT-218ENST00000498731 ABCC5O15440 1437 aa7.58□□□□□ -1.2
SOX2-OT-218ENST00000498731 DAPK1P53355 1430 aa7.58□□□□□ -1.2
SOX2-OT-218ENST00000498731 CHGAP10645 457 aaKnown RBP7.58□□□□□ -1.2
SOX2-OT-218ENST00000498731 RBM25P49756 843 aaKnown RBP7.58□□□□□ -1.2
SOX2-OT-218ENST00000498731 KCTD17Q8N5Z5 321 aa7.58□□□□□ -1.2
SOX2-OT-218ENST00000498731 EFCAB2Q5VUJ9 269 aa7.57□□□□□ -1.2
SOX2-OT-218ENST00000498731 PLCD3Q8N3E9 789 aa7.57□□□□□ -1.2
SOX2-OT-218ENST00000498731 AFAP1Q8N556 730 aa7.57□□□□□ -1.2
SOX2-OT-218ENST00000498731 EXOC6Q8TAG9 804 aa7.57□□□□□ -1.2
SOX2-OT-218ENST00000498731 PNNQ9H307 717 aaKnown RBP7.57□□□□□ -1.2
SOX2-OT-218ENST00000498731 CWC22Q9HCG8 908 aaKnown RBP7.57□□□□□ -1.2
SOX2-OT-218ENST00000498731 VGLL3A8MV65 326 aa7.57□□□□□ -1.2
SOX2-OT-218ENST00000498731 HSPA5P11021 654 aaKnown RBP7.57□□□□□ -1.2
SOX2-OT-218ENST00000498731 EIF4G2P78344 907 aaKnown RBP eCLIP7.57□□□□□ -1.2
SOX2-OT-218ENST00000498731 LRRIQ1Q96JM4 1722 aa7.57□□□□□ -1.2
SOX2-OT-218ENST00000498731 ZBTB7CA1YPR0 619 aa7.56□□□□□ -1.2
SOX2-OT-218ENST00000498731 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.56□□□□□ -1.2
SOX2-OT-218ENST00000498731 MIA2Q96PC5 1412 aa7.56□□□□□ -1.2
SOX2-OT-218ENST00000498731 STAC3Q96MF2 364 aa7.56□□□□□ -1.2
SOX2-OT-218ENST00000498731 CD109Q6YHK3 1445 aa7.55□□□□□ -1.2
SOX2-OT-218ENST00000498731 ZNF592Q92610 1267 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms