RNA–Protein interactions for RNA: ENST00000498236.1

CDC42-205, Transcript of cell division cycle 42, humanhuman

TSL 5

Gene CDC42, Length 816 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-205ENST00000498236 PLB1Q6P1J6 1458 aa11.64□□□□□ -0.55
CDC42-205ENST00000498236 STK25O00506 426 aa11.64□□□□□ -0.55
CDC42-205ENST00000498236 POTEFA5A3E0 1075 aa11.63□□□□□ -0.55
CDC42-205ENST00000498236 TTLL13PA6NNM8 815 aa11.63□□□□□ -0.55
CDC42-205ENST00000498236 ARHGEF11O15085 1522 aa11.63□□□□□ -0.55
CDC42-205ENST00000498236 CDK13Q14004 1512 aaKnown RBP11.62□□□□□ -0.55
CDC42-205ENST00000498236 MAGI3Q5TCQ9 1506 aa11.62□□□□□ -0.55
CDC42-205ENST00000498236 PHLDB1Q86UU1 1377 aa11.62□□□□□ -0.55
CDC42-205ENST00000498236 CCNB3Q8WWL7 1395 aa11.62□□□□□ -0.55
CDC42-205ENST00000498236 CDK11AQ9UQ88 783 aaPredicted RBP11.61□□□□□ -0.55
CDC42-205ENST00000498236 PCDHB13Q9Y5F0 798 aa11.61□□□□□ -0.55
CDC42-205ENST00000498236 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.61□□□□□ -0.558e-13■■□□□ 13.2
CDC42-205ENST00000498236 ERCC6L2Q5T890 1561 aa11.61□□□□□ -0.55
CDC42-205ENST00000498236 SUPT6HQ7KZ85 1726 aaKnown RBP11.6□□□□□ -0.55
CDC42-205ENST00000498236 NCOA2Q15596 1464 aa11.6□□□□□ -0.55
CDC42-205ENST00000498236 TSHZ2Q9NRE2 1034 aa11.6□□□□□ -0.55
CDC42-205ENST00000498236 KDM2AQ9Y2K7 1162 aa11.6□□□□□ -0.55
CDC42-205ENST00000498236 UACAQ9BZF9 1416 aa11.6□□□□□ -0.55
CDC42-205ENST00000498236 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.59□□□□□ -0.55
CDC42-205ENST00000498236 IER5LQ5T953 404 aa11.59□□□□□ -0.55
CDC42-205ENST00000498236 ZFP91Q96JP5 570 aaPredicted RBP11.59□□□□□ -0.55
CDC42-205ENST00000498236 UHRF1BP1LA0JNW5 1464 aa11.58□□□□□ -0.56
CDC42-205ENST00000498236 NKX1-1Q15270 411 aaPredicted RBP11.58□□□□□ -0.56
CDC42-205ENST00000498236 ATP10BO94823 1461 aa11.57□□□□□ -0.56
CDC42-205ENST00000498236 ABCC2Q92887 1545 aa11.57□□□□□ -0.56
CDC42-205ENST00000498236 COLQQ9Y215 455 aaPredicted RBP11.57□□□□□ -0.56
CDC42-205ENST00000498236 STK24Q9Y6E0 443 aa11.57□□□□□ -0.56
CDC42-205ENST00000498236 TROQ12816 1431 aaPredicted RBP11.57□□□□□ -0.56
CDC42-205ENST00000498236 MYOM3Q5VTT5 1437 aa11.57□□□□□ -0.56
CDC42-205ENST00000498236 FGD6Q6ZV73 1430 aa11.56□□□□□ -0.56
CDC42-205ENST00000498236 ZNF467Q7Z7K2 595 aaPredicted RBP11.56□□□□□ -0.56
CDC42-205ENST00000498236 BCL11BQ9C0K0 894 aaPredicted RBP11.56□□□□□ -0.56
CDC42-205ENST00000498236 TRIM35Q9UPQ4 493 aa11.56□□□□□ -0.56
CDC42-205ENST00000498236 ADCY10Q96PN6 1610 aa11.55□□□□□ -0.56
CDC42-205ENST00000498236 MIA2Q96PC5 1412 aa11.53□□□□□ -0.56
CDC42-205ENST00000498236 LCE2DQ5TA82 110 aaPredicted RBP11.53□□□□□ -0.56
CDC42-205ENST00000498236 BCANQ96GW7 911 aa11.53□□□□□ -0.56
CDC42-205ENST00000498236 TCOF1Q13428 1488 aaKnown RBP11.52□□□□□ -0.56
CDC42-205ENST00000498236 GTPBP6O43824 516 aaPredicted RBP11.52□□□□□ -0.57
CDC42-205ENST00000498236 KDM5BQ9UGL1 1544 aa11.51□□□□□ -0.57
CDC42-205ENST00000498236 PLEKHD1A6NEE1 506 aa11.51□□□□□ -0.57
CDC42-205ENST00000498236 IFNL1Q8IU54 200 aa11.51□□□□□ -0.57
CDC42-205ENST00000498236 ARID3CA6NKF2 412 aa11.5□□□□□ -0.57
CDC42-205ENST00000498236 HRCP23327 699 aa11.5□□□□□ -0.57
CDC42-205ENST00000498236 PDAP1Q13442 181 aaKnown RBP11.49□□□□□ -0.57
CDC42-205ENST00000498236 RYDENQ9NUL5 291 aaKnown RBP11.49□□□□□ -0.57
CDC42-205ENST00000498236 TMEM106CQ9BVX2 250 aa11.48□□□□□ -0.57
CDC42-205ENST00000498236 ABCC10Q5T3U5 1492 aa11.48□□□□□ -0.57
CDC42-205ENST00000498236 KIF14Q15058 1648 aa11.48□□□□□ -0.57
CDC42-205ENST00000498236 PTPN23Q9H3S7 1636 aa11.48□□□□□ -0.57
CDC42-205ENST00000498236 PCDHB8Q9UN66 801 aa11.47□□□□□ -0.57
CDC42-205ENST00000498236 GPATCH8Q9UKJ3 1502 aaKnown RBP11.46□□□□□ -0.57
CDC42-205ENST00000498236 FAM50AQ14320 339 aaKnown RBP11.46□□□□□ -0.57
CDC42-205ENST00000498236 ITSN2Q9NZM3 1697 aa11.46□□□□□ -0.58
CDC42-205ENST00000498236 ZCCHC11Q5TAX3 1644 aaKnown RBP11.46□□□□□ -0.58
CDC42-205ENST00000498236 PLCG2P16885 1265 aa11.44□□□□□ -0.58
CDC42-205ENST00000498236 ZEB1P37275 1124 aaPredicted RBP11.44□□□□□ -0.58
CDC42-205ENST00000498236 PSEN1P49768 467 aa11.42□□□□□ -0.58
CDC42-205ENST00000498236 SLAIN1Q8ND83 568 aa11.42□□□□□ -0.58
CDC42-205ENST00000498236 AKNAQ7Z591 1439 aa11.41□□□□□ -0.58
CDC42-205ENST00000498236 SETD5Q9C0A6 1442 aa11.41□□□□□ -0.58
CDC42-205ENST00000498236 CDC42BPAQ5VT25 1732 aa11.4□□□□□ -0.58
CDC42-205ENST00000498236 CFDP1Q9UEE9 299 aaPredicted RBP11.4□□□□□ -0.58
CDC42-205ENST00000498236 HFM1A2PYH4 1435 aa11.4□□□□□ -0.58
CDC42-205ENST00000498236 PTPRKQ15262 1439 aa11.4□□□□□ -0.58
CDC42-205ENST00000498236 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.39□□□□□ -0.592e-6■□□□□ 10.8
CDC42-205ENST00000498236 DNMT1P26358 1616 aaKnown RBP11.38□□□□□ -0.59
CDC42-205ENST00000498236 PREX2Q70Z35 1606 aa11.38□□□□□ -0.59
CDC42-205ENST00000498236 CAMSAP2Q08AD1 1489 aa11.38□□□□□ -0.59
CDC42-205ENST00000498236 WDR7Q9Y4E6 1490 aa11.38□□□□□ -0.59
CDC42-205ENST00000498236 ITGAEP38570 1179 aa11.38□□□□□ -0.59
CDC42-205ENST00000498236 CCER1Q8TC90 406 aaPredicted RBP11.38□□□□□ -0.59
CDC42-205ENST00000498236 IRX5P78411 483 aaPredicted RBP11.37□□□□□ -0.59
CDC42-205ENST00000498236 ROCK1Q13464 1354 aa11.37□□□□□ -0.59
CDC42-205ENST00000498236 RAB3GAP2Q9H2M9 1393 aa11.37□□□□□ -0.59
CDC42-205ENST00000498236 TTC37Q6PGP7 1564 aa11.37□□□□□ -0.59
CDC42-205ENST00000498236 CLSPNQ9HAW4 1339 aa11.36□□□□□ -0.59
CDC42-205ENST00000498236 ABCC5O15440 1437 aa11.36□□□□□ -0.59
CDC42-205ENST00000498236 DAPK1P53355 1430 aa11.36□□□□□ -0.59
CDC42-205ENST00000498236 ARAP3Q8WWN8 1544 aa11.36□□□□□ -0.59
CDC42-205ENST00000498236 CDAN1Q8IWY9 1227 aa11.36□□□□□ -0.59
CDC42-205ENST00000498236 OCEL1Q9H607 264 aa11.36□□□□□ -0.59
CDC42-205ENST00000498236 ZNF644Q9H582 1327 aaPredicted RBP11.35□□□□□ -0.59
CDC42-205ENST00000498236 CDC42BPBQ9Y5S2 1711 aa11.35□□□□□ -0.59
CDC42-205ENST00000498236 RIMBP3CA6NJZ7 1639 aa11.35□□□□□ -0.59
CDC42-205ENST00000498236 RIMBP3BA6NNM3 1639 aa11.35□□□□□ -0.59
CDC42-205ENST00000498236 RIMBP3Q9UFD9 1639 aa11.35□□□□□ -0.59
CDC42-205ENST00000498236 PLCH2O75038 1416 aa11.35□□□□□ -0.59
CDC42-205ENST00000498236 NAIPQ13075 1403 aa11.35□□□□□ -0.59
CDC42-205ENST00000498236 ASXL2Q76L83 1435 aa11.35□□□□□ -0.59
CDC42-205ENST00000498236 ACIN1Q9UKV3 1341 aaKnown RBP11.35□□□□□ -0.59
CDC42-205ENST00000498236 ARHGEF5Q12774 1597 aa11.34□□□□□ -0.59
CDC42-205ENST00000498236 SHANK2Q9UPX8 1470 aa11.34□□□□□ -0.59
CDC42-205ENST00000498236 MYO5CQ9NQX4 1742 aa11.34□□□□□ -0.59
CDC42-205ENST00000498236 PLEKHH2Q8IVE3 1493 aa11.33□□□□□ -0.6
CDC42-205ENST00000498236 DHX57Q6P158 1386 aaKnown RBP11.33□□□□□ -0.6
CDC42-205ENST00000498236 RSPH4AQ5TD94 716 aa11.33□□□□□ -0.6
CDC42-205ENST00000498236 KIAA1107Q9UPP5 1409 aa11.33□□□□□ -0.6
CDC42-205ENST00000498236 ADGRL2O95490 1459 aa11.32□□□□□ -0.6
CDC42-205ENST00000498236 MBD5Q9P267 1494 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms