RNA–Protein interactions for RNA: ENST00000498187.6

NKX2-1-202, Transcript of NK2 homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NKX2-1, Length 2,338 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-202ENST00000498187 SMG6Q86US8 1419 aaKnown RBP26.71■■□□□ 1.87
NKX2-1-202ENST00000498187 FAM135AQ9P2D6 1515 aa26.71■■□□□ 1.87
NKX2-1-202ENST00000498187 ST20-MTHFSA0A0A6YYL1 179 aa26.69■■□□□ 1.86
NKX2-1-202ENST00000498187 MYT1LQ9UL68 1186 aa26.67■■□□□ 1.86
NKX2-1-202ENST00000498187 ABCC2Q92887 1545 aa26.65■■□□□ 1.86
NKX2-1-202ENST00000498187 RSPH4AQ5TD94 716 aa26.65■■□□□ 1.86
NKX2-1-202ENST00000498187 PNISRQ8TF01 805 aaKnown RBP26.64■■□□□ 1.86
NKX2-1-202ENST00000498187 NUDCQ9Y266 331 aa26.64■■□□□ 1.86
NKX2-1-202ENST00000498187 SYCP2Q9BX26 1530 aa26.63■■□□□ 1.85
NKX2-1-202ENST00000498187 TMC1Q8TDI8 760 aa26.63■■□□□ 1.85
NKX2-1-202ENST00000498187 E9PCH4 1651 aa26.62■■□□□ 1.85
NKX2-1-202ENST00000498187 CLASP1Q7Z460 1538 aa26.61■■□□□ 1.85
NKX2-1-202ENST00000498187 TTC37Q6PGP7 1564 aa26.61■■□□□ 1.85
NKX2-1-202ENST00000498187 TRPM1Q7Z4N2 1603 aa26.6■■□□□ 1.85
NKX2-1-202ENST00000498187 CCDC144AA2RUR9 1427 aa26.6■■□□□ 1.85
NKX2-1-202ENST00000498187 ARHGAP5Q13017 1502 aa26.6■■□□□ 1.85
NKX2-1-202ENST00000498187 MAST1Q9Y2H9 1570 aa26.59■■□□□ 1.85
NKX2-1-202ENST00000498187 UNC13BO14795 1591 aa26.59■■□□□ 1.85
NKX2-1-202ENST00000498187 PRAG1Q86YV5 1406 aa26.58■■□□□ 1.85
NKX2-1-202ENST00000498187 ERCC6L2Q5T890 1561 aa26.56■■□□□ 1.84
NKX2-1-202ENST00000498187 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.56■■□□□ 1.84
NKX2-1-202ENST00000498187 KTN1Q86UP2 1357 aaKnown RBP26.56■■□□□ 1.84
NKX2-1-202ENST00000498187 SENP3-EIF4A1A0A087X0R7 540 aa26.56■■□□□ 1.84
NKX2-1-202ENST00000498187 RNF123Q5XPI4 1314 aa26.55■■□□□ 1.84
NKX2-1-202ENST00000498187 MYBBP1AQ9BQG0 1328 aaKnown RBP26.55■■□□□ 1.84
NKX2-1-202ENST00000498187 UHRF1BP1LA0JNW5 1464 aa26.55■■□□□ 1.84
NKX2-1-202ENST00000498187 BRD4O60885 1362 aaPredicted RBP26.54■■□□□ 1.84
NKX2-1-202ENST00000498187 RALBP1Q15311 655 aa26.54■■□□□ 1.84
NKX2-1-202ENST00000498187 OSCARQ8IYS5 282 aa26.54■■□□□ 1.84
NKX2-1-202ENST00000498187 LRPPRCP42704 1394 aaKnown RBP26.53■■□□□ 1.84
NKX2-1-202ENST00000498187 PLA2R1Q13018 1463 aa26.53■■□□□ 1.84
NKX2-1-202ENST00000498187 MYO5CQ9NQX4 1742 aa26.52■■□□□ 1.84
NKX2-1-202ENST00000498187 RGL3Q3MIN7 710 aa26.51■■□□□ 1.84
NKX2-1-202ENST00000498187 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.51■■□□□ 1.84
NKX2-1-202ENST00000498187 PLEKHH2Q8IVE3 1493 aa26.51■■□□□ 1.83
NKX2-1-202ENST00000498187 PLXNC1O60486 1568 aa26.51■■□□□ 1.83
NKX2-1-202ENST00000498187 IQGAP3Q86VI3 1631 aa26.5■■□□□ 1.83
NKX2-1-202ENST00000498187 A2MP01023 1474 aa26.49■■□□□ 1.83
NKX2-1-202ENST00000498187 NBPF1Q3BBV0 1214 aa26.48■■□□□ 1.83
NKX2-1-202ENST00000498187 CCDC136Q96JN2 1154 aa26.48■■□□□ 1.83
NKX2-1-202ENST00000498187 NOP58Q9Y2X3 529 aaKnown RBP26.47■■□□□ 1.83
NKX2-1-202ENST00000498187 GPRASP1Q5JY77 1395 aa26.46■■□□□ 1.83
NKX2-1-202ENST00000498187 LAMC1P11047 1609 aa26.44■■□□□ 1.82
NKX2-1-202ENST00000498187 PARD3Q8TEW0 1356 aa26.43■■□□□ 1.82
NKX2-1-202ENST00000498187 ZCCHC11Q5TAX3 1644 aaKnown RBP26.42■■□□□ 1.82
NKX2-1-202ENST00000498187 PRDM15P57071 1507 aaPredicted RBP26.42■■□□□ 1.82
NKX2-1-202ENST00000498187 DUOX2Q9NRD8 1548 aa26.42■■□□□ 1.82
NKX2-1-202ENST00000498187 COL17A1Q9UMD9 1497 aaPredicted RBP26.41■■□□□ 1.82
NKX2-1-202ENST00000498187 NLRP13Q86W25 1043 aa26.4■■□□□ 1.82
NKX2-1-202ENST00000498187 EIF2AK4Q9P2K8 1649 aaKnown RBP26.4■■□□□ 1.82
NKX2-1-202ENST00000498187 MAGI2Q86UL8 1455 aa26.39■■□□□ 1.82
NKX2-1-202ENST00000498187 PER1O15534 1290 aaPredicted RBP26.38■■□□□ 1.81
NKX2-1-202ENST00000498187 ERBINQ96RT1 1412 aa26.37■■□□□ 1.81
NKX2-1-202ENST00000498187 PLCH2O75038 1416 aa26.37■■□□□ 1.81
NKX2-1-202ENST00000498187 DISP3Q9P2K9 1392 aa26.37■■□□□ 1.81
NKX2-1-202ENST00000498187 ATP10AO60312 1499 aa26.37■■□□□ 1.81
NKX2-1-202ENST00000498187 ANP32AP39687 249 aaKnown RBP26.36■■□□□ 1.81
NKX2-1-202ENST00000498187 TESK2Q96S53 571 aa26.36■■□□□ 1.81
NKX2-1-202ENST00000498187 DEKP35659 375 aaKnown RBP26.32■■□□□ 1.8
NKX2-1-202ENST00000498187 ARAP3Q8WWN8 1544 aa26.32■■□□□ 1.8
NKX2-1-202ENST00000498187 IPO9Q96P70 1041 aaKnown RBP26.31■■□□□ 1.8
NKX2-1-202ENST00000498187 PAK3O75914 559 aaPredicted RBP26.29■■□□□ 1.8
NKX2-1-202ENST00000498187 ABCC1P33527 1531 aa26.29■■□□□ 1.8
NKX2-1-202ENST00000498187 SALL2Q9Y467 1007 aaPredicted RBP26.29■■□□□ 1.8
NKX2-1-202ENST00000498187 WASHC2CQ9Y4E1 1318 aa26.29■■□□□ 1.8
NKX2-1-202ENST00000498187 RNF17Q9BXT8 1623 aaKnown RBP26.29■■□□□ 1.8
NKX2-1-202ENST00000498187 EFCAB2Q5VUJ9 269 aa26.28■■□□□ 1.8
NKX2-1-202ENST00000498187 CC2D1BQ5T0F9 858 aaKnown RBP26.28■■□□□ 1.8
NKX2-1-202ENST00000498187 RRP1P56182 461 aaKnown RBP26.27■■□□□ 1.8
NKX2-1-202ENST00000498187 TMF1P82094 1093 aa26.27■■□□□ 1.8
NKX2-1-202ENST00000498187 PANK3Q9H999 370 aa26.27■■□□□ 1.8
NKX2-1-202ENST00000498187 TRAPPC8Q9Y2L5 1435 aa26.26■■□□□ 1.79
NKX2-1-202ENST00000498187 RCAN3Q9UKA8 241 aa26.25■■□□□ 1.79
NKX2-1-202ENST00000498187 PDE3BQ13370 1112 aa26.24■■□□□ 1.79
NKX2-1-202ENST00000498187 ZBTB47Q9UFB7 747 aaPredicted RBP26.23■■□□□ 1.79
NKX2-1-202ENST00000498187 NBR1Q14596 966 aa26.22■■□□□ 1.79
NKX2-1-202ENST00000498187 MADDQ8WXG6 1647 aa26.2■■□□□ 1.78
NKX2-1-202ENST00000498187 BLMP54132 1417 aaPredicted RBP26.19■■□□□ 1.78
NKX2-1-202ENST00000498187 EXOC6Q8TAG9 804 aa26.17■■□□□ 1.78
NKX2-1-202ENST00000498187 INSRP06213 1382 aa26.17■■□□□ 1.78
NKX2-1-202ENST00000498187 RTEL1-TNFRSF6BF6WH68 1400 aa26.17■■□□□ 1.78
NKX2-1-202ENST00000498187 ZMYM4Q5VZL5 1548 aa26.17■■□□□ 1.78
NKX2-1-202ENST00000498187 CDCA7LQ96GN5 454 aa26.16■■□□□ 1.78
NKX2-1-202ENST00000498187 WDR7Q9Y4E6 1490 aa26.16■■□□□ 1.78
NKX2-1-202ENST00000498187 IQGAP1P46940 1657 aa26.16■■□□□ 1.78
NKX2-1-202ENST00000498187 SPAG9O60271 1321 aaKnown RBP26.16■■□□□ 1.78
NKX2-1-202ENST00000498187 PRKCSHP14314 528 aaPredicted RBP26.15■■□□□ 1.78
NKX2-1-202ENST00000498187 TRPM2O94759 1503 aa26.15■■□□□ 1.78
NKX2-1-202ENST00000498187 TCERG1O14776 1098 aaKnown RBP26.15■■□□□ 1.78
NKX2-1-202ENST00000498187 CEP152O94986 1710 aa26.14■■□□□ 1.78
NKX2-1-202ENST00000498187 SPHKAPQ2M3C7 1700 aa26.14■■□□□ 1.78
NKX2-1-202ENST00000498187 ZFYVE16Q7Z3T8 1539 aa26.14■■□□□ 1.77
NKX2-1-202ENST00000498187 RTL5Q5HYW3 569 aaPredicted RBP26.12■■□□□ 1.77
NKX2-1-202ENST00000498187 AFAP1Q8N556 730 aa26.12■■□□□ 1.77
NKX2-1-202ENST00000498187 ABCA9Q8IUA7 1624 aa26.1■■□□□ 1.77
NKX2-1-202ENST00000498187 CLTCL1P53675 1640 aa26.1■■□□□ 1.77
NKX2-1-202ENST00000498187 DEPDC5O75140 1603 aa26.09■■□□□ 1.77
NKX2-1-202ENST00000498187 PTPRTO14522 1441 aa26.08■■□□□ 1.77
NKX2-1-202ENST00000498187 TET3O43151 1660 aa26.06■■□□□ 1.76
NKX2-1-202ENST00000498187 SCAF11Q99590 1463 aaKnown RBP26.06■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms