RNA–Protein interactions for RNA: ENST00000497638.2

VPS45-210, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 1,135 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-210ENST00000497638 GTPBP6O43824 516 aaPredicted RBP14.28□□□□□ -0.12
VPS45-210ENST00000497638 MAGI1Q96QZ7 1491 aaPredicted RBP14.27□□□□□ -0.12
VPS45-210ENST00000497638 RAD54L2Q9Y4B4 1467 aa14.26□□□□□ -0.13
VPS45-210ENST00000497638 TDRD9Q8NDG6 1382 aaKnown RBP14.26□□□□□ -0.13
VPS45-210ENST00000497638 SOGA1O94964 1423 aa14.24□□□□□ -0.13
VPS45-210ENST00000497638 PDE4AP27815 886 aa14.24□□□□□ -0.13
VPS45-210ENST00000497638 CHMP7Q8WUX9 453 aaPredicted RBP14.24□□□□□ -0.13
VPS45-210ENST00000497638 PSDA5PKW4 1024 aaPredicted RBP14.23□□□□□ -0.13
VPS45-210ENST00000497638 PBX2P40425 430 aa14.23□□□□□ -0.13
VPS45-210ENST00000497638 RNF166Q96A37 237 aaPredicted RBP14.23□□□□□ -0.13
VPS45-210ENST00000497638 CRISPLD2Q9H0B8 497 aa14.23□□□□□ -0.13
VPS45-210ENST00000497638 MYT1LQ9UL68 1186 aa14.23□□□□□ -0.13
VPS45-210ENST00000497638 LSM11P83369 360 aaKnown RBP eCLIP14.22□□□□□ -0.13
VPS45-210ENST00000497638 SYNJ2O15056 1496 aa14.21□□□□□ -0.13
VPS45-210ENST00000497638 GRIN2BQ13224 1484 aa14.21□□□□□ -0.13
VPS45-210ENST00000497638 GAPVD1Q14C86 1478 aa14.21□□□□□ -0.13
VPS45-210ENST00000497638 PPP1R15BQ5SWA1 713 aa14.21□□□□□ -0.13
VPS45-210ENST00000497638 AXIN2Q9Y2T1 843 aa14.21□□□□□ -0.13
VPS45-210ENST00000497638 UPF1Q92900 1129 aaKnown RBP eCLIP14.2□□□□□ -0.14
VPS45-210ENST00000497638 PTGER2P43116 358 aa14.19□□□□□ -0.14
VPS45-210ENST00000497638 FGD5Q6ZNL6 1462 aa14.18□□□□□ -0.14
VPS45-210ENST00000497638 KDM4FA0A1W2PPD8 638 aa14.18□□□□□ -0.14
VPS45-210ENST00000497638 NCKAP5LQ9HCH0 1330 aa14.17□□□□□ -0.14
VPS45-210ENST00000497638 POTEEQ6S8J3 1075 aa14.16□□□□□ -0.14
VPS45-210ENST00000497638 LARP6Q9BRS8 491 aaKnown RBP14.15□□□□□ -0.14
VPS45-210ENST00000497638 ARHGAP33O14559 1287 aa14.14□□□□□ -0.15
VPS45-210ENST00000497638 PPP4R3BQ5MIZ7 849 aa14.14□□□□□ -0.15
VPS45-210ENST00000497638 OXER1Q8TDS5 423 aa14.14□□□□□ -0.15
VPS45-210ENST00000497638 DDX27Q96GQ7 796 aaKnown RBP14.12□□□□□ -0.15
VPS45-210ENST00000497638 PBRM1Q86U86 1689 aa14.1□□□□□ -0.15
VPS45-210ENST00000497638 CUX1P39880 1505 aa14.1□□□□□ -0.15
VPS45-210ENST00000497638 PSEN2P49810 448 aa14.06□□□□□ -0.16
VPS45-210ENST00000497638 KCNH8Q96L42 1107 aa14.05□□□□□ -0.16
VPS45-210ENST00000497638 AMER1Q5JTC6 1135 aaPredicted RBP14.04□□□□□ -0.16
VPS45-210ENST00000497638 ADGRD1Q6QNK2 874 aa14.04□□□□□ -0.16
VPS45-210ENST00000497638 ZNF454Q8N9F8 522 aa14.04□□□□□ -0.16
VPS45-210ENST00000497638 ERCC6L2Q5T890 1561 aa14.04□□□□□ -0.16
VPS45-210ENST00000497638 ABCA5Q8WWZ7 1642 aa14.04□□□□□ -0.16
VPS45-210ENST00000497638 BBXQ8WY36 941 aaPredicted RBP14.03□□□□□ -0.16
VPS45-210ENST00000497638 ABCA10Q8WWZ4 1543 aa14.02□□□□□ -0.16
VPS45-210ENST00000497638 GRIN2AQ12879 1464 aa14.02□□□□□ -0.16
VPS45-210ENST00000497638 MAP3K9P80192 1104 aa14.02□□□□□ -0.17
VPS45-210ENST00000497638 MFSD10Q14728 455 aa14.02□□□□□ -0.17
VPS45-210ENST00000497638 DMRTA1Q5VZB9 504 aa14.02□□□□□ -0.17
VPS45-210ENST00000497638 CEP170Q5SW79 1584 aa14.01□□□□□ -0.17
VPS45-210ENST00000497638 CADPS2Q86UW7 1296 aa14.01□□□□□ -0.17
VPS45-210ENST00000497638 KCNK17Q96T54 332 aa14.01□□□□□ -0.17
VPS45-210ENST00000497638 KIF13AQ9H1H9 1805 aa14.01□□□□□ -0.17
VPS45-210ENST00000497638 EVI5O60447 810 aa14□□□□□ -0.17
VPS45-210ENST00000497638 NUP160Q12769 1436 aa13.99□□□□□ -0.17
VPS45-210ENST00000497638 SHROOM2Q13796 1616 aa13.98□□□□□ -0.17
VPS45-210ENST00000497638 TK2O00142 265 aa13.98□□□□□ -0.17
VPS45-210ENST00000497638 ADAMTS12P58397 1594 aa13.96□□□□□ -0.17
VPS45-210ENST00000497638 STAC3Q96MF2 364 aa13.96□□□□□ -0.17
VPS45-210ENST00000497638 ANO8Q9HCE9 1232 aaPredicted RBP13.95□□□□□ -0.18
VPS45-210ENST00000497638 FOSBP53539 338 aa13.94□□□□□ -0.18
VPS45-210ENST00000497638 RTN4Q9NQC3 1192 aaKnown RBP13.94□□□□□ -0.18
VPS45-210ENST00000497638 EMILIN3Q9NT22 766 aa13.93□□□□□ -0.18
VPS45-210ENST00000497638 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.93□□□□□ -0.18
VPS45-210ENST00000497638 BCL2L12Q9HB09 334 aa13.92□□□□□ -0.18
VPS45-210ENST00000497638 SPRYD3Q8NCJ5 442 aa13.91□□□□□ -0.18
VPS45-210ENST00000497638 JPH4Q96JJ6 628 aa13.91□□□□□ -0.18
VPS45-210ENST00000497638 FHAD1B1AJZ9 1412 aa13.9□□□□□ -0.18
VPS45-210ENST00000497638 HRO43593 1189 aa13.9□□□□□ -0.18
VPS45-210ENST00000497638 PTPREP23469 700 aa13.9□□□□□ -0.18
VPS45-210ENST00000497638 ABCC10Q5T3U5 1492 aa13.9□□□□□ -0.18
VPS45-210ENST00000497638 ZDHHC16Q969W1 377 aa13.89□□□□□ -0.19
VPS45-210ENST00000497638 WRNQ14191 1432 aaPredicted RBP eCLIP13.88□□□□□ -0.19
VPS45-210ENST00000497638 MAPKBP1O60336 1514 aa13.87□□□□□ -0.19
VPS45-210ENST00000497638 PRG4Q92954 1404 aaPredicted RBP13.87□□□□□ -0.19
VPS45-210ENST00000497638 FAM69CQ0P6D2 419 aa13.86□□□□□ -0.19
VPS45-210ENST00000497638 HCSTQ9UBK5 93 aa13.86□□□□□ -0.19
VPS45-210ENST00000497638 VPS9D1Q9Y2B5 631 aa13.86□□□□□ -0.19
VPS45-210ENST00000497638 DIP2BQ9P265 1576 aa13.85□□□□□ -0.19
VPS45-210ENST00000497638 ERICH3Q5RHP9 1530 aa13.85□□□□□ -0.19
VPS45-210ENST00000497638 KDM6BO15054 1643 aa13.84□□□□□ -0.19
VPS45-210ENST00000497638 ADAM33Q9BZ11 813 aa13.84□□□□□ -0.19
VPS45-210ENST00000497638 KCTD12Q96CX2 325 aaKnown RBP13.83□□□□□ -0.2
VPS45-210ENST00000497638 CFAP44Q96MT7 982 aa13.83□□□□□ -0.2
VPS45-210ENST00000497638 CAMK2BQ13554 666 aa13.81□□□□□ -0.2
VPS45-210ENST00000497638 PAXIP1Q6ZW49 1069 aaPredicted RBP13.81□□□□□ -0.2
VPS45-210ENST00000497638 DPYSL4O14531 572 aa13.8□□□□□ -0.2
VPS45-210ENST00000497638 SLC4A5Q9BY07 1137 aa13.8□□□□□ -0.2
VPS45-210ENST00000497638 PCDHGA10Q9Y5H3 936 aa13.8□□□□□ -0.2
VPS45-210ENST00000497638 ZBED2Q9BTP6 218 aa13.78□□□□□ -0.2
VPS45-210ENST00000497638 RUSC2Q8N2Y8 1516 aa13.78□□□□□ -0.2
VPS45-210ENST00000497638 TOP2BQ02880 1626 aa13.78□□□□□ -0.2
VPS45-210ENST00000497638 ADCY10Q96PN6 1610 aa13.78□□□□□ -0.2
VPS45-210ENST00000497638 BIVM-ERCC5R4GMW8 1640 aa13.78□□□□□ -0.2
VPS45-210ENST00000497638 PHF14O94880 888 aa13.76□□□□□ -0.21
VPS45-210ENST00000497638 TYW1BQ6NUM6 668 aa13.76□□□□□ -0.21
VPS45-210ENST00000497638 FBXW7Q969H0 707 aa13.75□□□□□ -0.21
VPS45-210ENST00000497638 GOLGA8CPA6NN73 597 aa13.74□□□□□ -0.21
VPS45-210ENST00000497638 TSPOAP1O95153 1857 aa13.74□□□□□ -0.21
VPS45-210ENST00000497638 BHMG1C9JSJ3 638 aaPredicted RBP13.72□□□□□ -0.21
VPS45-210ENST00000497638 MRPL50Q8N5N7 158 aaKnown RBP13.72□□□□□ -0.21
VPS45-210ENST00000497638 PLA2G2EQ9NZK7 142 aa13.72□□□□□ -0.21
VPS45-210ENST00000497638 PPP1R3GB7ZBB8 358 aa13.71□□□□□ -0.21
VPS45-210ENST00000497638 WDR70Q9NW82 654 aa13.71□□□□□ -0.21
VPS45-210ENST00000497638 PTPN5P54829 565 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms