RNA–Protein interactions for RNA: ENST00000497107.1

ITGA6-211, Transcript of integrin subunit alpha 6, humanhuman

TSL 2

Gene ITGA6, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6-211ENST00000497107 ARIH1Q9Y4X5 557 aaPredicted RBP10.61□□□□□ -0.71
ITGA6-211ENST00000497107 PTPN5P54829 565 aa10.6□□□□□ -0.71
ITGA6-211ENST00000497107 STAC3Q96MF2 364 aa10.6□□□□□ -0.71
ITGA6-211ENST00000497107 KCNK17Q96T54 332 aa10.6□□□□□ -0.71
ITGA6-211ENST00000497107 IRX2Q9BZI1 471 aaPredicted RBP10.6□□□□□ -0.71
ITGA6-211ENST00000497107 A0A0G2JS52 829 aa10.57□□□□□ -0.72
ITGA6-211ENST00000497107 ARHGEF1Q92888 912 aaKnown RBP10.57□□□□□ -0.72
ITGA6-211ENST00000497107 DPYSL4O14531 572 aa10.56□□□□□ -0.72
ITGA6-211ENST00000497107 KCNV2Q8TDN2 545 aa10.56□□□□□ -0.72
ITGA6-211ENST00000497107 SPDYE16A6NNV3 312 aaPredicted RBP10.55□□□□□ -0.72
ITGA6-211ENST00000497107 BHMG1C9JSJ3 638 aaPredicted RBP10.55□□□□□ -0.72
ITGA6-211ENST00000497107 EVI5O60447 810 aa10.55□□□□□ -0.72
ITGA6-211ENST00000497107 THSD4Q6ZMP0 1018 aa10.55□□□□□ -0.72
ITGA6-211ENST00000497107 SLC4A5Q9BY07 1137 aa10.55□□□□□ -0.72
ITGA6-211ENST00000497107 PDIA6Q15084 440 aa10.53□□□□□ -0.72
ITGA6-211ENST00000497107 KCNH8Q96L42 1107 aa10.53□□□□□ -0.72
ITGA6-211ENST00000497107 ANO8Q9HCE9 1232 aaPredicted RBP10.52□□□□□ -0.73
ITGA6-211ENST00000497107 BCL2L12Q9HB09 334 aa10.5□□□□□ -0.73
ITGA6-211ENST00000497107 ZNF454Q8N9F8 522 aa10.47□□□□□ -0.73
ITGA6-211ENST00000497107 JPH4Q96JJ6 628 aa10.46□□□□□ -0.73
ITGA6-211ENST00000497107 ZBED2Q9BTP6 218 aa10.46□□□□□ -0.73
ITGA6-211ENST00000497107 WNT2BQ93097 391 aa10.45□□□□□ -0.74
ITGA6-211ENST00000497107 RSF1Q96T23 1441 aaPredicted RBP10.44□□□□□ -0.74
ITGA6-211ENST00000497107 FOSBP53539 338 aa10.43□□□□□ -0.74
ITGA6-211ENST00000497107 PHF14O94880 888 aa10.42□□□□□ -0.74
ITGA6-211ENST00000497107 MRPL50Q8N5N7 158 aaKnown RBP10.42□□□□□ -0.74
ITGA6-211ENST00000497107 PTPREP23469 700 aa10.41□□□□□ -0.74
ITGA6-211ENST00000497107 EPAS1Q99814 870 aa10.41□□□□□ -0.74
ITGA6-211ENST00000497107 GOLGA8CPA6NN73 597 aa10.4□□□□□ -0.74
ITGA6-211ENST00000497107 FBXW7Q969H0 707 aa10.4□□□□□ -0.74
ITGA6-211ENST00000497107 TYW1BQ6NUM6 668 aa10.39□□□□□ -0.75
ITGA6-211ENST00000497107 ZDHHC16Q969W1 377 aa10.39□□□□□ -0.75
ITGA6-211ENST00000497107 ITGBL1O95965 494 aaPredicted RBP10.38□□□□□ -0.75
ITGA6-211ENST00000497107 DDX12PQ92771 950 aa10.38□□□□□ -0.75
ITGA6-211ENST00000497107 PCDHGA10Q9Y5H3 936 aa10.38□□□□□ -0.75
ITGA6-211ENST00000497107 CECR2Q9BXF3 1484 aa10.36□□□□□ -0.75
ITGA6-211ENST00000497107 GRXCR2A6NFK2 248 aa10.36□□□□□ -0.75
ITGA6-211ENST00000497107 SEMA3EO15041 775 aa10.35□□□□□ -0.75
ITGA6-211ENST00000497107 NBR1Q14596 966 aa10.35□□□□□ -0.75
ITGA6-211ENST00000497107 NBPF3Q9H094 633 aa10.35□□□□□ -0.75
ITGA6-211ENST00000497107 UNC13AQ9UPW8 1703 aa10.34□□□□□ -0.75
ITGA6-211ENST00000497107 SMYD5Q6GMV2 418 aa10.34□□□□□ -0.75
ITGA6-211ENST00000497107 Q6ZNB5 142 aa10.34□□□□□ -0.75
ITGA6-211ENST00000497107 ADAM33Q9BZ11 813 aa10.34□□□□□ -0.75
ITGA6-211ENST00000497107 TESPA1A2RU30 521 aaPredicted RBP10.33□□□□□ -0.76
ITGA6-211ENST00000497107 MROH2BQ7Z745 1585 aa10.32□□□□□ -0.76
ITGA6-211ENST00000497107 MLLT3P42568 568 aaPredicted RBP10.32□□□□□ -0.76
ITGA6-211ENST00000497107 BAZ1AQ9NRL2 1556 aaPredicted RBP10.31□□□□□ -0.76
ITGA6-211ENST00000497107 EN1Q05925 392 aaPredicted RBP10.31□□□□□ -0.76
ITGA6-211ENST00000497107 TULP1O00294 542 aaPredicted RBP10.3□□□□□ -0.76
ITGA6-211ENST00000497107 OSBPP22059 807 aa10.3□□□□□ -0.76
ITGA6-211ENST00000497107 LCE2BO14633 110 aa10.28□□□□□ -0.76
ITGA6-211ENST00000497107 MAP3K7O43318 606 aa10.28□□□□□ -0.76
ITGA6-211ENST00000497107 RBM33Q96EV2 1170 aaKnown RBP10.28□□□□□ -0.76
ITGA6-211ENST00000497107 C6orf132Q5T0Z8 1188 aa10.27□□□□□ -0.77
ITGA6-211ENST00000497107 RABGEF1Q9UJ41 708 aa10.27□□□□□ -0.77
ITGA6-211ENST00000497107 ANKK1Q8NFD2 765 aa10.26□□□□□ -0.77
ITGA6-211ENST00000497107 PPP1R3GB7ZBB8 358 aa10.25□□□□□ -0.77
ITGA6-211ENST00000497107 BCAMP50895 628 aa10.25□□□□□ -0.77
ITGA6-211ENST00000497107 PROX2Q3B8N5 592 aa10.25□□□□□ -0.77
ITGA6-211ENST00000497107 BICRAQ9NZM4 1560 aa10.25□□□□□ -0.77
ITGA6-211ENST00000497107 SOWAHBA6NEL2 793 aa10.24□□□□□ -0.77
ITGA6-211ENST00000497107 BCANQ96GW7 911 aa10.24□□□□□ -0.77
ITGA6-211ENST00000497107 WIZO95785 1651 aa10.24□□□□□ -0.77
ITGA6-211ENST00000497107 CERKQ8TCT0 537 aa10.23□□□□□ -0.77
ITGA6-211ENST00000497107 SMARCA4P51532 1647 aa10.22□□□□□ -0.77
ITGA6-211ENST00000497107 COL9A1P20849 921 aa10.22□□□□□ -0.77
ITGA6-211ENST00000497107 PRIM1P49642 420 aaKnown RBP10.22□□□□□ -0.77
ITGA6-211ENST00000497107 TSR1Q2NL82 804 aaKnown RBP10.21□□□□□ -0.77
ITGA6-211ENST00000497107 NYAP1Q6ZVC0 841 aa10.21□□□□□ -0.77
ITGA6-211ENST00000497107 LAPTM4BQ86VI4 370 aa10.2□□□□□ -0.78
ITGA6-211ENST00000497107 KCNC4Q03721 635 aa10.19□□□□□ -0.78
ITGA6-211ENST00000497107 WBP1LQ9NX94 342 aa10.19□□□□□ -0.78
ITGA6-211ENST00000497107 LAPTM4AQ15012 233 aa10.18□□□□□ -0.78
ITGA6-211ENST00000497107 ZFRQ96KR1 1074 aaKnown RBP10.17□□□□□ -0.78
ITGA6-211ENST00000497107 CDHR5Q9HBB8 845 aa10.17□□□□□ -0.78
ITGA6-211ENST00000497107 NUTM2FA1L443 756 aa10.16□□□□□ -0.78
ITGA6-211ENST00000497107 ONECUT3O60422 494 aaPredicted RBP10.16□□□□□ -0.78
ITGA6-211ENST00000497107 RBM26Q5T8P6 1007 aaKnown RBP10.16□□□□□ -0.78
ITGA6-211ENST00000497107 TOP2AP11388 1531 aaKnown RBP10.16□□□□□ -0.78
ITGA6-211ENST00000497107 TRAF7Q6Q0C0 670 aa10.15□□□□□ -0.78
ITGA6-211ENST00000497107 RBM27Q9P2N5 1060 aaKnown RBP10.15□□□□□ -0.78
ITGA6-211ENST00000497107 FCHSD2O94868 740 aa10.14□□□□□ -0.79
ITGA6-211ENST00000497107 PTGDRQ13258 359 aa10.14□□□□□ -0.79
ITGA6-211ENST00000497107 KIAA1468Q9P260 1216 aa10.14□□□□□ -0.79
ITGA6-211ENST00000497107 PRSS12P56730 875 aa10.13□□□□□ -0.79
ITGA6-211ENST00000497107 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.13□□□□□ -0.79
ITGA6-211ENST00000497107 GPIHBP1Q8IV16 184 aa10.13□□□□□ -0.79
ITGA6-211ENST00000497107 NPDC1Q9NQX5 325 aaPredicted RBP10.13□□□□□ -0.79
ITGA6-211ENST00000497107 TRIM6-TRIM34B2RNG4 842 aa10.12□□□□□ -0.79
ITGA6-211ENST00000497107 GFRA3O60609 400 aa10.12□□□□□ -0.79
ITGA6-211ENST00000497107 CDCA7LQ96GN5 454 aa10.12□□□□□ -0.79
ITGA6-211ENST00000497107 LMOD2Q6P5Q4 547 aa10.11□□□□□ -0.79
ITGA6-211ENST00000497107 HIC1Q14526 733 aa10.1□□□□□ -0.79
ITGA6-211ENST00000497107 PACS2Q86VP3 889 aa10.1□□□□□ -0.79
ITGA6-211ENST00000497107 SEPT9Q9UHD8 586 aaPredicted RBP10.09□□□□□ -0.79
ITGA6-211ENST00000497107 TSR3Q9UJK0 312 aaKnown RBP10.08□□□□□ -0.8
ITGA6-211ENST00000497107 PEG3Q9GZU2 1588 aa10.08□□□□□ -0.8
ITGA6-211ENST00000497107 CCDC88BA6NC98 1476 aa10.07□□□□□ -0.8
ITGA6-211ENST00000497107 PRKCSHP14314 528 aaPredicted RBP10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms