RNA–Protein interactions for RNA: ENST00000496202.5

PRPF3-207, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 1 (best)

Gene PRPF3, Length 1,082 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-207ENST00000496202 ESF1Q9H501 851 aaKnown RBP14.59□□□□□ -0.07
PRPF3-207ENST00000496202 GGT6Q6P531 493 aa14.58□□□□□ -0.08
PRPF3-207ENST00000496202 RIMS1Q86UR5 1692 aaKnown RBP14.58□□□□□ -0.08
PRPF3-207ENST00000496202 RNF17Q9BXT8 1623 aaKnown RBP14.57□□□□□ -0.08
PRPF3-207ENST00000496202 ANKRD50Q9ULJ7 1429 aa14.57□□□□□ -0.08
PRPF3-207ENST00000496202 GCC2Q8IWJ2 1684 aa14.56□□□□□ -0.08
PRPF3-207ENST00000496202 KDM4FA0A1W2PPD8 638 aa14.56□□□□□ -0.08
PRPF3-207ENST00000496202 CNTLNQ9NXG0 1405 aa14.54□□□□□ -0.08
PRPF3-207ENST00000496202 FAM135AQ9P2D6 1515 aa14.53□□□□□ -0.08
PRPF3-207ENST00000496202 CLTCQ00610 1675 aaKnown RBP14.52□□□□□ -0.08
PRPF3-207ENST00000496202 KDM5DQ9BY66 1539 aa14.52□□□□□ -0.08
PRPF3-207ENST00000496202 HFM1A2PYH4 1435 aa14.52□□□□□ -0.08
PRPF3-207ENST00000496202 KANK1Q14678 1352 aa14.52□□□□□ -0.08
PRPF3-207ENST00000496202 PPP6R1Q9UPN7 881 aa14.52□□□□□ -0.09
PRPF3-207ENST00000496202 DEPDC5O75140 1603 aa14.52□□□□□ -0.09
PRPF3-207ENST00000496202 NAIPQ13075 1403 aa14.51□□□□□ -0.09
PRPF3-207ENST00000496202 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.51□□□□□ -0.092e-9■■■□□ 15.5
PRPF3-207ENST00000496202 MROH2AA6NES4 1674 aa14.51□□□□□ -0.09
PRPF3-207ENST00000496202 ZC3H13Q5T200 1668 aaKnown RBP14.51□□□□□ -0.09
PRPF3-207ENST00000496202 PRDM15P57071 1507 aaPredicted RBP14.51□□□□□ -0.09
PRPF3-207ENST00000496202 PTPRMP28827 1452 aa14.5□□□□□ -0.09
PRPF3-207ENST00000496202 WASHC2CQ9Y4E1 1318 aa14.5□□□□□ -0.09
PRPF3-207ENST00000496202 MROH1Q8NDA8 1641 aa14.5□□□□□ -0.09
PRPF3-207ENST00000496202 UNC13BO14795 1591 aa14.49□□□□□ -0.09
PRPF3-207ENST00000496202 CEP152O94986 1710 aa14.49□□□□□ -0.09
PRPF3-207ENST00000496202 ABCC3O15438 1527 aa14.48□□□□□ -0.09
PRPF3-207ENST00000496202 C3P01024 1663 aa14.46□□□□□ -0.09
PRPF3-207ENST00000496202 CAMSAP1Q5T5Y3 1602 aa14.45□□□□□ -0.1
PRPF3-207ENST00000496202 TRIM26Q12899 539 aaPredicted RBP14.45□□□□□ -0.1
PRPF3-207ENST00000496202 SETD5Q9C0A6 1442 aa14.44□□□□□ -0.1
PRPF3-207ENST00000496202 ZMYM3Q14202 1370 aa14.44□□□□□ -0.1
PRPF3-207ENST00000496202 VWDEQ8N2E2 1590 aa14.43□□□□□ -0.1
PRPF3-207ENST00000496202 NUP155O75694 1391 aa14.43□□□□□ -0.1
PRPF3-207ENST00000496202 IQGAP3Q86VI3 1631 aa14.42□□□□□ -0.1
PRPF3-207ENST00000496202 CEBPAP49715 358 aaPredicted RBP14.42□□□□□ -0.1
PRPF3-207ENST00000496202 TRIM52Q96A61 297 aa14.42□□□□□ -0.1
PRPF3-207ENST00000496202 CFAP65Q6ZU64 1925 aaKnown RBP14.42□□□□□ -0.1
PRPF3-207ENST00000496202 PZPP20742 1482 aa14.42□□□□□ -0.1
PRPF3-207ENST00000496202 TET3O43151 1660 aa14.42□□□□□ -0.1
PRPF3-207ENST00000496202 SETD1BQ9UPS6 1966 aaKnown RBP14.42□□□□□ -0.1
PRPF3-207ENST00000496202 LMTK2Q8IWU2 1503 aa14.41□□□□□ -0.1
PRPF3-207ENST00000496202 EFCAB6Q5THR3 1501 aa14.4□□□□□ -0.1
PRPF3-207ENST00000496202 ACIN1Q9UKV3 1341 aaKnown RBP14.4□□□□□ -0.1
PRPF3-207ENST00000496202 RAB3GAP2Q9H2M9 1393 aa14.39□□□□□ -0.11
PRPF3-207ENST00000496202 NPATQ14207 1427 aa14.39□□□□□ -0.11
PRPF3-207ENST00000496202 ARHGAP31Q2M1Z3 1444 aa14.37□□□□□ -0.11
PRPF3-207ENST00000496202 PREX1Q8TCU6 1659 aa14.36□□□□□ -0.11
PRPF3-207ENST00000496202 ERVK-7P63135 1459 aa14.36□□□□□ -0.11
PRPF3-207ENST00000496202 TNRQ92752 1358 aa14.35□□□□□ -0.11
PRPF3-207ENST00000496202 RPRD2Q5VT52 1461 aaKnown RBP14.35□□□□□ -0.11
PRPF3-207ENST00000496202 UHRF1BP1Q6BDS2 1440 aa14.34□□□□□ -0.11
PRPF3-207ENST00000496202 E9PCH4 1651 aa14.34□□□□□ -0.11
PRPF3-207ENST00000496202 FBXO31Q5XUX0 539 aaPredicted RBP14.34□□□□□ -0.11
PRPF3-207ENST00000496202 SLC4A1APQ9BWU0 796 aaKnown RBP14.34□□□□□ -0.11
PRPF3-207ENST00000496202 SPATA31D1Q6ZQQ2 1576 aa14.34□□□□□ -0.11
PRPF3-207ENST00000496202 MYO3AQ8NEV4 1616 aa14.33□□□□□ -0.11
PRPF3-207ENST00000496202 HRCP23327 699 aa14.3□□□□□ -0.12
PRPF3-207ENST00000496202 PKD2Q13563 968 aa14.3□□□□□ -0.12
PRPF3-207ENST00000496202 NLRP1Q9C000 1473 aa14.3□□□□□ -0.12
PRPF3-207ENST00000496202 ZNF142P52746 1687 aaPredicted RBP14.3□□□□□ -0.12
PRPF3-207ENST00000496202 SPHKAPQ2M3C7 1700 aa14.29□□□□□ -0.12
PRPF3-207ENST00000496202 CEP170BQ9Y4F5 1589 aaPredicted RBP14.29□□□□□ -0.12
PRPF3-207ENST00000496202 A2ML1A8K2U0 1454 aa14.28□□□□□ -0.12
PRPF3-207ENST00000496202 SYNMO15061 1565 aa14.28□□□□□ -0.12
PRPF3-207ENST00000496202 NOS1P29475 1434 aa14.28□□□□□ -0.12
PRPF3-207ENST00000496202 LMTK3Q96Q04 1460 aa14.28□□□□□ -0.12
PRPF3-207ENST00000496202 MPHOSPH9Q99550 1183 aa14.28□□□□□ -0.12
PRPF3-207ENST00000496202 PCGF6Q9BYE7 350 aa14.27□□□□□ -0.13
PRPF3-207ENST00000496202 STAG3Q9UJ98 1225 aa14.25□□□□□ -0.13
PRPF3-207ENST00000496202 PIK3C2BO00750 1634 aa14.24□□□□□ -0.13
PRPF3-207ENST00000496202 UGGT1Q9NYU2 1555 aa14.24□□□□□ -0.13
PRPF3-207ENST00000496202 SLC52A1Q9NWF4 448 aa14.23□□□□□ -0.13
PRPF3-207ENST00000496202 TRPM2O94759 1503 aa14.23□□□□□ -0.13
PRPF3-207ENST00000496202 PTPRTO14522 1441 aa14.23□□□□□ -0.13
PRPF3-207ENST00000496202 HSPA2P54652 639 aa14.22□□□□□ -0.13
PRPF3-207ENST00000496202 FOXD1Q16676 465 aa14.22□□□□□ -0.13
PRPF3-207ENST00000496202 UBR1Q8IWV7 1749 aa14.21□□□□□ -0.13
PRPF3-207ENST00000496202 ADGRB3O60242 1522 aa14.21□□□□□ -0.13
PRPF3-207ENST00000496202 CHGAP10645 457 aaKnown RBP14.21□□□□□ -0.13
PRPF3-207ENST00000496202 IDI1Q13907 227 aa14.21□□□□□ -0.13
PRPF3-207ENST00000496202 KDM5AP29375 1690 aaKnown RBP14.2□□□□□ -0.14
PRPF3-207ENST00000496202 CLTCL1P53675 1640 aa14.2□□□□□ -0.14
PRPF3-207ENST00000496202 THEMISQ8N1K5 641 aaPredicted RBP14.2□□□□□ -0.14
PRPF3-207ENST00000496202 KIF1BO60333 1816 aa14.2□□□□□ -0.14
PRPF3-207ENST00000496202 CCDC144AA2RUR9 1427 aa14.19□□□□□ -0.14
PRPF3-207ENST00000496202 MYO5BQ9ULV0 1848 aa14.19□□□□□ -0.14
PRPF3-207ENST00000496202 PLA2R1Q13018 1463 aa14.18□□□□□ -0.14
PRPF3-207ENST00000496202 TMEM131LA2VDJ0 1609 aa14.16□□□□□ -0.14
PRPF3-207ENST00000496202 POLR1AO95602 1720 aaPredicted RBP14.16□□□□□ -0.14
PRPF3-207ENST00000496202 ANKLE2Q86XL3 938 aa14.14□□□□□ -0.15
PRPF3-207ENST00000496202 EID1Q9Y6B2 187 aa14.14□□□□□ -0.15
PRPF3-207ENST00000496202 ANKRD30BQ9BXX2 1392 aa14.13□□□□□ -0.15
PRPF3-207ENST00000496202 ZNF326Q5BKZ1 582 aaKnown RBP14.13□□□□□ -0.15
PRPF3-207ENST00000496202 SLIT1O75093 1534 aa14.13□□□□□ -0.15
PRPF3-207ENST00000496202 DHX57Q6P158 1386 aaKnown RBP14.12□□□□□ -0.15
PRPF3-207ENST00000496202 TMEM2Q9UHN6 1383 aa14.12□□□□□ -0.15
PRPF3-207ENST00000496202 STRCQ7RTU9 1775 aa14.12□□□□□ -0.15
PRPF3-207ENST00000496202 SCAF11Q99590 1463 aaKnown RBP14.12□□□□□ -0.15
PRPF3-207ENST00000496202 ARHGAP23Q9P227 1491 aa14.12□□□□□ -0.15
PRPF3-207ENST00000496202 PPP1R15AO75807 674 aaPredicted RBP14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms