RNA–Protein interactions for RNA: ENST00000495910.6

NF1-216, Transcript of neurofibromin 1, humanhuman

TSL 2

Gene NF1, Length 8,223 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-216ENST00000495910 CFAP57Q96MR6 1250 aa6.34□□□□□ -1.39
NF1-216ENST00000495910 DDX49Q9Y6V7 483 aaKnown RBP6.34□□□□□ -1.4
NF1-216ENST00000495910 PPP1R15AO75807 674 aaPredicted RBP6.33□□□□□ -1.4
NF1-216ENST00000495910 HOOK1Q9UJC3 728 aaKnown RBP6.33□□□□□ -1.4
NF1-216ENST00000495910 CT47B1P0C2W7 299 aaPredicted RBP6.33□□□□□ -1.4
NF1-216ENST00000495910 ANKRD62A6NC57 917 aa6.33□□□□□ -1.4
NF1-216ENST00000495910 IPO8O15397 1037 aaKnown RBP6.33□□□□□ -1.4
NF1-216ENST00000495910 MFAP1P55081 439 aaKnown RBP6.33□□□□□ -1.4
NF1-216ENST00000495910 ERLIN2O94905 339 aa6.33□□□□□ -1.4
NF1-216ENST00000495910 SEPT7Q16181 437 aaKnown RBP6.33□□□□□ -1.4
NF1-216ENST00000495910 GOLGA6L10A6NI86 522 aa6.32□□□□□ -1.4
NF1-216ENST00000495910 CLGNO14967 610 aa6.32□□□□□ -1.4
NF1-216ENST00000495910 TCEAL9Q9UHQ7 104 aa6.32□□□□□ -1.4
NF1-216ENST00000495910 IFT57Q9NWB7 429 aa6.32□□□□□ -1.4
NF1-216ENST00000495910 ENOX2Q16206 610 aaKnown RBP6.32□□□□□ -1.4
NF1-216ENST00000495910 U2SURPO15042 1029 aaKnown RBP6.32□□□□□ -1.4
NF1-216ENST00000495910 RABEP1Q15276 862 aa6.32□□□□□ -1.4
NF1-216ENST00000495910 SKIDA1Q1XH10 827 aa6.32□□□□□ -1.4
NF1-216ENST00000495910 GORABQ5T7V8 394 aa6.32□□□□□ -1.4
NF1-216ENST00000495910 CEP63Q96MT8 703 aa6.32□□□□□ -1.4
NF1-216ENST00000495910 PMFBP1Q8TBY8 1022 aa6.32□□□□□ -1.4
NF1-216ENST00000495910 PPM1EQ8WY54 764 aa6.32□□□□□ -1.4
NF1-216ENST00000495910 FOXD4L1Q9NU39 408 aa6.32□□□□□ -1.4
NF1-216ENST00000495910 APBB1O00213 710 aa6.31□□□□□ -1.4
NF1-216ENST00000495910 HMGN5P82970 282 aaKnown RBP6.31□□□□□ -1.4
NF1-216ENST00000495910 FAM184AQ8NB25 1140 aa6.31□□□□□ -1.4
NF1-216ENST00000495910 NACADO15069 1562 aa6.31□□□□□ -1.4
NF1-216ENST00000495910 AKAP17AQ02040 695 aaKnown RBP6.31□□□□□ -1.4
NF1-216ENST00000495910 R3HCC1Q9Y3T6 440 aaKnown RBP6.31□□□□□ -1.4
NF1-216ENST00000495910 ZFYVE27Q5T4F4 411 aa6.3□□□□□ -1.4
NF1-216ENST00000495910 TICAM2Q86XR7 235 aa6.3□□□□□ -1.4
NF1-216ENST00000495910 P3H3Q8IVL6 736 aa6.3□□□□□ -1.4
NF1-216ENST00000495910 CENPHQ9H3R5 247 aa6.3□□□□□ -1.4
NF1-216ENST00000495910 CCDC39Q9UFE4 941 aa6.3□□□□□ -1.4
NF1-216ENST00000495910 SENP3-EIF4A1A0A087X0R7 540 aa6.3□□□□□ -1.4
NF1-216ENST00000495910 CCP110O43303 1012 aa6.3□□□□□ -1.4
NF1-216ENST00000495910 NOL8Q76FK4 1167 aaKnown RBP6.3□□□□□ -1.4
NF1-216ENST00000495910 AEBP1Q8IUX7 1158 aa6.3□□□□□ -1.4
NF1-216ENST00000495910 TRIM6-TRIM34B2RNG4 842 aa6.3□□□□□ -1.4
NF1-216ENST00000495910 EIF3JO75822 258 aaKnown RBP6.3□□□□□ -1.4
NF1-216ENST00000495910 RB1CC1Q8TDY2 1594 aa6.3□□□□□ -1.4
NF1-216ENST00000495910 FOXD4L5Q5VV16 416 aaPredicted RBP6.3□□□□□ -1.4
NF1-216ENST00000495910 FOXD4L4Q8WXT5 416 aaPredicted RBP6.3□□□□□ -1.4
NF1-216ENST00000495910 ZNF526Q8TF50 670 aaPredicted RBP6.29□□□□□ -1.4
NF1-216ENST00000495910 TOMM22Q9NS69 142 aa6.29□□□□□ -1.4
NF1-216ENST00000495910 HDAC5Q9UQL6 1122 aa6.29□□□□□ -1.4
NF1-216ENST00000495910 DHX37Q8IY37 1157 aaKnown RBP6.29□□□□□ -1.4
NF1-216ENST00000495910 GOLGA6L10A0A0M3HER8 536 aa6.29□□□□□ -1.4
NF1-216ENST00000495910 STAMBPO95630 424 aa6.29□□□□□ -1.4
NF1-216ENST00000495910 SLC26A8Q96RN1 970 aa6.29□□□□□ -1.4
NF1-216ENST00000495910 HIRIP3Q9BW71 556 aaPredicted RBP6.29□□□□□ -1.4
NF1-216ENST00000495910 OFD1O75665 1012 aa6.28□□□□□ -1.4
NF1-216ENST00000495910 GPATCH11Q8N954 259 aa6.28□□□□□ -1.4
NF1-216ENST00000495910 DDX23Q9BUQ8 820 aaKnown RBP6.28□□□□□ -1.4
NF1-216ENST00000495910 SEPT6Q14141 434 aa6.28□□□□□ -1.4
NF1-216ENST00000495910 PAF1Q8N7H5 531 aa6.28□□□□□ -1.4
NF1-216ENST00000495910 SETSIPP0DME0 302 aa6.28□□□□□ -1.4
NF1-216ENST00000495910 TRIM29Q14134 588 aa6.28□□□□□ -1.4
NF1-216ENST00000495910 SASS6Q6UVJ0 657 aa6.28□□□□□ -1.4
NF1-216ENST00000495910 SYNE3Q6ZMZ3 975 aa6.27□□□□□ -1.41
NF1-216ENST00000495910 CHMP4AQ9BY43 222 aa6.27□□□□□ -1.41
NF1-216ENST00000495910 MYO15BQ96JP2 1530 aa6.27□□□□□ -1.41
NF1-216ENST00000495910 PRKCSHP14314 528 aaPredicted RBP6.27□□□□□ -1.41
NF1-216ENST00000495910 CCDC146Q8IYE0 955 aa6.27□□□□□ -1.41
NF1-216ENST00000495910 RTF1Q92541 710 aaKnown RBP6.27□□□□□ -1.41
NF1-216ENST00000495910 RBM33Q96EV2 1170 aaKnown RBP6.27□□□□□ -1.41
NF1-216ENST00000495910 G3V3G9 751 aa6.27□□□□□ -1.41
NF1-216ENST00000495910 ERLIN1O75477 346 aa6.27□□□□□ -1.41
NF1-216ENST00000495910 NPM1P06748 294 aaKnown RBP eCLIP6.27□□□□□ -1.41
NF1-216ENST00000495910 GBP2P32456 591 aaPredicted RBP6.27□□□□□ -1.41
NF1-216ENST00000495910 MAPK8IP2Q13387 824 aaPredicted RBP6.27□□□□□ -1.41
NF1-216ENST00000495910 DCAF8Q5TAQ9 597 aa6.27□□□□□ -1.41
NF1-216ENST00000495910 CCDC91Q7Z6B0 441 aa6.27□□□□□ -1.41
NF1-216ENST00000495910 DDX11Q96FC9 970 aa6.27□□□□□ -1.41
NF1-216ENST00000495910 TSPY4P0CV99 314 aa6.27□□□□□ -1.41
NF1-216ENST00000495910 TSPY10P0CW01 314 aa6.27□□□□□ -1.41
NF1-216ENST00000495910 EPS15P42566 896 aa6.27□□□□□ -1.41
NF1-216ENST00000495910 RNF20Q5VTR2 975 aa6.27□□□□□ -1.41
NF1-216ENST00000495910 ITPRIPQ8IWB1 547 aa6.27□□□□□ -1.41
NF1-216ENST00000495910 DAAM2Q86T65 1068 aa6.26□□□□□ -1.41
NF1-216ENST00000495910 TAX1BP1Q86VP1 789 aa6.26□□□□□ -1.41
NF1-216ENST00000495910 FYB1O15117 783 aa6.26□□□□□ -1.41
NF1-216ENST00000495910 CPLX2Q6PUV4 134 aaKnown RBP6.26□□□□□ -1.41
NF1-216ENST00000495910 SHTN1A0MZ66 631 aa6.26□□□□□ -1.41
NF1-216ENST00000495910 MCTP1Q6DN14 999 aa6.26□□□□□ -1.41
NF1-216ENST00000495910 CCDC112Q8NEF3 446 aa6.26□□□□□ -1.41
NF1-216ENST00000495910 CCDC43Q96MW1 224 aaKnown RBP6.26□□□□□ -1.41
NF1-216ENST00000495910 CHIC2Q9UKJ5 165 aa6.26□□□□□ -1.41
NF1-216ENST00000495910 CHMP3Q9Y3E7 222 aa6.26□□□□□ -1.41
NF1-216ENST00000495910 HMGB1P09429 215 aaKnown RBP6.26□□□□□ -1.41
NF1-216ENST00000495910 CC2D1BQ5T0F9 858 aaKnown RBP6.26□□□□□ -1.41
NF1-216ENST00000495910 LMOD2Q6P5Q4 547 aa6.26□□□□□ -1.41
NF1-216ENST00000495910 FEZ1Q99689 392 aa6.26□□□□□ -1.41
NF1-216ENST00000495910 CTDP1Q9Y5B0 961 aaPredicted RBP6.26□□□□□ -1.41
NF1-216ENST00000495910 NAT10Q9H0A0 1025 aaKnown RBP6.25□□□□□ -1.41
NF1-216ENST00000495910 RBM25P49756 843 aaKnown RBP6.25□□□□□ -1.41
NF1-216ENST00000495910 BICD2Q8TD16 824 aa6.25□□□□□ -1.41
NF1-216ENST00000495910 SMARCE1Q969G3 411 aa6.25□□□□□ -1.41
NF1-216ENST00000495910 CCDC97Q96F63 343 aaPredicted RBP6.25□□□□□ -1.41
NF1-216ENST00000495910 LMOD3Q0VAK6 560 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms