RNA–Protein interactions for RNA: ENST00000495756.5

ATG3-208, Transcript of autophagy related 3, humanhuman

TSL 1 (best)

Gene ATG3, Length 1,455 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-208ENST00000495756 DEPDC5O75140 1603 aa29.01■■■□□ 2.24
ATG3-208ENST00000495756 UNC13BO14795 1591 aa29.01■■■□□ 2.23
ATG3-208ENST00000495756 MROH1Q8NDA8 1641 aa28.98■■■□□ 2.23
ATG3-208ENST00000495756 GGT6Q6P531 493 aa28.97■■■□□ 2.23
ATG3-208ENST00000495756 ACIN1Q9UKV3 1341 aaKnown RBP28.97■■■□□ 2.23
ATG3-208ENST00000495756 PRDM15P57071 1507 aaPredicted RBP28.97■■■□□ 2.23
ATG3-208ENST00000495756 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.96■■■□□ 2.23
ATG3-208ENST00000495756 TRIM52Q96A61 297 aa28.94■■■□□ 2.22
ATG3-208ENST00000495756 NUP155O75694 1391 aa28.94■■■□□ 2.22
ATG3-208ENST00000495756 MLECQ14165 292 aa28.93■■■□□ 2.22
ATG3-208ENST00000495756 KDM5DQ9BY66 1539 aa28.91■■■□□ 2.22
ATG3-208ENST00000495756 KANK1Q14678 1352 aa28.9■■■□□ 2.22
ATG3-208ENST00000495756 VWDEQ8N2E2 1590 aa28.9■■■□□ 2.22
ATG3-208ENST00000495756 PPP6R1Q9UPN7 881 aa28.88■■■□□ 2.21
ATG3-208ENST00000495756 IQGAP3Q86VI3 1631 aa28.88■■■□□ 2.21
ATG3-208ENST00000495756 FAM135AQ9P2D6 1515 aa28.86■■■□□ 2.21
ATG3-208ENST00000495756 PZPP20742 1482 aa28.85■■■□□ 2.21
ATG3-208ENST00000495756 WASHC2CQ9Y4E1 1318 aa28.85■■■□□ 2.21
ATG3-208ENST00000495756 ABCC3O15438 1527 aa28.84■■■□□ 2.21
ATG3-208ENST00000495756 ZC3H13Q5T200 1668 aaKnown RBP28.83■■■□□ 2.21
ATG3-208ENST00000495756 CEP152O94986 1710 aa28.82■■■□□ 2.2
ATG3-208ENST00000495756 LMTK2Q8IWU2 1503 aa28.81■■■□□ 2.2
ATG3-208ENST00000495756 MPHOSPH9Q99550 1183 aa28.79■■■□□ 2.2
ATG3-208ENST00000495756 SLC4A1APQ9BWU0 796 aaKnown RBP28.79■■■□□ 2.2
ATG3-208ENST00000495756 TET3O43151 1660 aa28.78■■■□□ 2.2
ATG3-208ENST00000495756 CLTCQ00610 1675 aaKnown RBP28.78■■■□□ 2.2
ATG3-208ENST00000495756 ESF1Q9H501 851 aaKnown RBP28.78■■■□□ 2.2
ATG3-208ENST00000495756 ADAMTSL3P82987 1691 aa28.77■■■□□ 2.2
ATG3-208ENST00000495756 FER1L4A9Z1Z3 1794 aa28.77■■■□□ 2.2
ATG3-208ENST00000495756 CNTLNQ9NXG0 1405 aa28.76■■■□□ 2.19
ATG3-208ENST00000495756 CAMSAP1Q5T5Y3 1602 aa28.74■■■□□ 2.19
ATG3-208ENST00000495756 EFCAB6Q5THR3 1501 aa28.74■■■□□ 2.19
ATG3-208ENST00000495756 MADDQ8WXG6 1647 aa28.74■■■□□ 2.19
ATG3-208ENST00000495756 DHX57Q6P158 1386 aaKnown RBP28.73■■■□□ 2.19
ATG3-208ENST00000495756 PKD2Q13563 968 aa28.72■■■□□ 2.19
ATG3-208ENST00000495756 MROH2AA6NES4 1674 aa28.69■■■□□ 2.18
ATG3-208ENST00000495756 E9PCH4 1651 aa28.69■■■□□ 2.18
ATG3-208ENST00000495756 ARHGAP31Q2M1Z3 1444 aa28.69■■■□□ 2.18
ATG3-208ENST00000495756 ZMYM3Q14202 1370 aa28.67■■■□□ 2.18
ATG3-208ENST00000495756 NPATQ14207 1427 aa28.67■■■□□ 2.18
ATG3-208ENST00000495756 RIMS1Q86UR5 1692 aaKnown RBP28.67■■■□□ 2.18
ATG3-208ENST00000495756 RPRD2Q5VT52 1461 aaKnown RBP28.66■■■□□ 2.18
ATG3-208ENST00000495756 FOXD1Q16676 465 aa28.65■■■□□ 2.18
ATG3-208ENST00000495756 AEBP2Q6ZN18 517 aaPredicted RBP28.62■■■□□ 2.17
ATG3-208ENST00000495756 C3P01024 1663 aa28.6■■■□□ 2.17
ATG3-208ENST00000495756 KDM4FA0A1W2PPD8 638 aa28.59■■■□□ 2.17
ATG3-208ENST00000495756 CFAP65Q6ZU64 1925 aaKnown RBP28.58■■■□□ 2.17
ATG3-208ENST00000495756 PREX1Q8TCU6 1659 aa28.56■■■□□ 2.16
ATG3-208ENST00000495756 CEBPAP49715 358 aaPredicted RBP28.56■■■□□ 2.16
ATG3-208ENST00000495756 FBXO31Q5XUX0 539 aaPredicted RBP28.56■■■□□ 2.16
ATG3-208ENST00000495756 CCER1Q8TC90 406 aaPredicted RBP28.56■■■□□ 2.16
ATG3-208ENST00000495756 PTPRTO14522 1441 aa28.55■■■□□ 2.16
ATG3-208ENST00000495756 SPHKAPQ2M3C7 1700 aa28.55■■■□□ 2.16
ATG3-208ENST00000495756 PTPRMP28827 1452 aa28.54■■■□□ 2.16
ATG3-208ENST00000495756 ERVK-7P63135 1459 aa28.54■■■□□ 2.16
ATG3-208ENST00000495756 PLA2R1Q13018 1463 aa28.54■■■□□ 2.16
ATG3-208ENST00000495756 ANKRD30BQ9BXX2 1392 aa28.54■■■□□ 2.16
ATG3-208ENST00000495756 NOS1P29475 1434 aa28.54■■■□□ 2.16
ATG3-208ENST00000495756 SPATA31D1Q6ZQQ2 1576 aa28.52■■■□□ 2.16
ATG3-208ENST00000495756 TRPM2O94759 1503 aa28.5■■■□□ 2.15
ATG3-208ENST00000495756 PLPPR3Q6T4P5 718 aa28.5■■■□□ 2.15
ATG3-208ENST00000495756 SYNMO15061 1565 aa28.49■■■□□ 2.15
ATG3-208ENST00000495756 CLSPNQ9HAW4 1339 aa28.46■■■□□ 2.15
ATG3-208ENST00000495756 TNRQ92752 1358 aa28.45■■■□□ 2.14
ATG3-208ENST00000495756 CCDC144AA2RUR9 1427 aa28.43■■■□□ 2.14
ATG3-208ENST00000495756 UGGT1Q9NYU2 1555 aa28.42■■■□□ 2.14
ATG3-208ENST00000495756 PIK3C2BO00750 1634 aa28.41■■■□□ 2.14
ATG3-208ENST00000495756 CLTCL1P53675 1640 aa28.41■■■□□ 2.14
ATG3-208ENST00000495756 SLC52A1Q9NWF4 448 aa28.4■■■□□ 2.14
ATG3-208ENST00000495756 SIN3AQ96ST3 1273 aa28.38■■■□□ 2.13
ATG3-208ENST00000495756 IDI1Q13907 227 aa28.37■■■□□ 2.13
ATG3-208ENST00000495756 SETD1BQ9UPS6 1966 aaKnown RBP28.35■■■□□ 2.13
ATG3-208ENST00000495756 NLRP1Q9C000 1473 aa28.34■■■□□ 2.13
ATG3-208ENST00000495756 MYO3AQ8NEV4 1616 aa28.33■■■□□ 2.13
ATG3-208ENST00000495756 NEUROD1Q13562 356 aa28.33■■■□□ 2.13
ATG3-208ENST00000495756 KIF1BO60333 1816 aa28.3■■■□□ 2.12
ATG3-208ENST00000495756 SPATA31E1Q6ZUB1 1445 aa28.27■■■□□ 2.12
ATG3-208ENST00000495756 TMEM131LA2VDJ0 1609 aa28.26■■■□□ 2.11
ATG3-208ENST00000495756 ADGRB3O60242 1522 aa28.26■■■□□ 2.11
ATG3-208ENST00000495756 CHGAP10645 457 aaKnown RBP28.26■■■□□ 2.11
ATG3-208ENST00000495756 A2ML1A8K2U0 1454 aa28.25■■■□□ 2.11
ATG3-208ENST00000495756 CEP170BQ9Y4F5 1589 aaPredicted RBP28.25■■■□□ 2.11
ATG3-208ENST00000495756 NEURL4Q96JN8 1562 aa28.24■■■□□ 2.11
ATG3-208ENST00000495756 KDM5AP29375 1690 aaKnown RBP28.24■■■□□ 2.11
ATG3-208ENST00000495756 UHRF1BP1Q6BDS2 1440 aa28.24■■■□□ 2.11
ATG3-208ENST00000495756 ZNF142P52746 1687 aaPredicted RBP28.23■■■□□ 2.11
ATG3-208ENST00000495756 STAG3Q9UJ98 1225 aa28.23■■■□□ 2.11
ATG3-208ENST00000495756 UBR1Q8IWV7 1749 aa28.23■■■□□ 2.11
ATG3-208ENST00000495756 MYO5BQ9ULV0 1848 aa28.21■■■□□ 2.11
ATG3-208ENST00000495756 RGL3Q3MIN7 710 aa28.2■■■□□ 2.1
ATG3-208ENST00000495756 TONSLQ96HA7 1378 aa28.17■■■□□ 2.1
ATG3-208ENST00000495756 ZNF326Q5BKZ1 582 aaKnown RBP28.16■■■□□ 2.1
ATG3-208ENST00000495756 THEMISQ8N1K5 641 aaPredicted RBP28.15■■■□□ 2.1
ATG3-208ENST00000495756 L3MBTL2Q969R5 705 aa28.14■■■□□ 2.09
ATG3-208ENST00000495756 TIMELESSQ9UNS1 1208 aa28.14■■■□□ 2.09
ATG3-208ENST00000495756 RPGRIP1LQ68CZ1 1315 aa28.11■■■□□ 2.09
ATG3-208ENST00000495756 TMEM2Q9UHN6 1383 aa28.1■■■□□ 2.09
ATG3-208ENST00000495756 LMTK3Q96Q04 1460 aa28.09■■■□□ 2.09
ATG3-208ENST00000495756 NEXMIFQ5QGS0 1516 aa28.09■■■□□ 2.09
ATG3-208ENST00000495756 IFT172Q9UG01 1749 aa28.09■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms