RNA–Protein interactions for RNA: ENST00000495688.5

PTPN7-217, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 2,689 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-217ENST00000495688 NBPF1Q3BBV0 1214 aa17.57■□□□□ 0.4
PTPN7-217ENST00000495688 CCDC136Q96JN2 1154 aa17.57■□□□□ 0.4
PTPN7-217ENST00000495688 SALL2Q9Y467 1007 aaPredicted RBP17.57■□□□□ 0.4
PTPN7-217ENST00000495688 SAMD9LQ8IVG5 1584 aa17.56■□□□□ 0.4
PTPN7-217ENST00000495688 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.56■□□□□ 0.4
PTPN7-217ENST00000495688 FAM135AQ9P2D6 1515 aa17.56■□□□□ 0.4
PTPN7-217ENST00000495688 MYBBP1AQ9BQG0 1328 aaKnown RBP17.55■□□□□ 0.4
PTPN7-217ENST00000495688 LRPPRCP42704 1394 aaKnown RBP17.55■□□□□ 0.4
PTPN7-217ENST00000495688 ARHGEF5Q12774 1597 aa17.54■□□□□ 0.4
PTPN7-217ENST00000495688 CDC42BPBQ9Y5S2 1711 aa17.54■□□□□ 0.4
PTPN7-217ENST00000495688 CCDC141Q6ZP82 1450 aa17.54■□□□□ 0.4
PTPN7-217ENST00000495688 BRD4O60885 1362 aaPredicted RBP17.52■□□□□ 0.4
PTPN7-217ENST00000495688 CCDC144AA2RUR9 1427 aa17.52■□□□□ 0.4
PTPN7-217ENST00000495688 RALBP1Q15311 655 aa17.52■□□□□ 0.39
PTPN7-217ENST00000495688 PRAG1Q86YV5 1406 aa17.51■□□□□ 0.39
PTPN7-217ENST00000495688 E9PCH4 1651 aa17.51■□□□□ 0.39
PTPN7-217ENST00000495688 SYCP2Q9BX26 1530 aa17.5■□□□□ 0.39
PTPN7-217ENST00000495688 PLA2R1Q13018 1463 aa17.5■□□□□ 0.39
PTPN7-217ENST00000495688 PREX2Q70Z35 1606 aa17.49■□□□□ 0.39
PTPN7-217ENST00000495688 TRPM1Q7Z4N2 1603 aa17.48■□□□□ 0.39
PTPN7-217ENST00000495688 PER1O15534 1290 aaPredicted RBP17.47■□□□□ 0.39
PTPN7-217ENST00000495688 BCL11AQ9H165 835 aa17.47■□□□□ 0.39
PTPN7-217ENST00000495688 CC2D1BQ5T0F9 858 aaKnown RBP17.46■□□□□ 0.39
PTPN7-217ENST00000495688 A2MP01023 1474 aa17.46■□□□□ 0.39
PTPN7-217ENST00000495688 TTC37Q6PGP7 1564 aa17.46■□□□□ 0.39
PTPN7-217ENST00000495688 NLRP13Q86W25 1043 aa17.46■□□□□ 0.39
PTPN7-217ENST00000495688 ARHGAP5Q13017 1502 aa17.45■□□□□ 0.38
PTPN7-217ENST00000495688 KTN1Q86UP2 1357 aaKnown RBP17.45■□□□□ 0.38
PTPN7-217ENST00000495688 PARD3Q8TEW0 1356 aa17.45■□□□□ 0.38
PTPN7-217ENST00000495688 DISP3Q9P2K9 1392 aa17.45■□□□□ 0.38
PTPN7-217ENST00000495688 PAK3O75914 559 aaPredicted RBP17.45■□□□□ 0.38
PTPN7-217ENST00000495688 RSPH4AQ5TD94 716 aa17.44■□□□□ 0.38
PTPN7-217ENST00000495688 PLEKHH2Q8IVE3 1493 aa17.44■□□□□ 0.38
PTPN7-217ENST00000495688 RRP1P56182 461 aaKnown RBP17.44■□□□□ 0.38
PTPN7-217ENST00000495688 EXOC6Q8TAG9 804 aa17.44■□□□□ 0.38
PTPN7-217ENST00000495688 CDCA7LQ96GN5 454 aa17.44■□□□□ 0.38
PTPN7-217ENST00000495688 TESK2Q96S53 571 aa17.44■□□□□ 0.38
PTPN7-217ENST00000495688 RCAN3Q9UKA8 241 aa17.42■□□□□ 0.38
PTPN7-217ENST00000495688 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.42■□□□□ 0.38
PTPN7-217ENST00000495688 PANK3Q9H999 370 aa17.41■□□□□ 0.38
PTPN7-217ENST00000495688 NOP58Q9Y2X3 529 aaKnown RBP17.41■□□□□ 0.38
PTPN7-217ENST00000495688 GPRASP1Q5JY77 1395 aa17.4■□□□□ 0.38
PTPN7-217ENST00000495688 UNC13BO14795 1591 aa17.4■□□□□ 0.38
PTPN7-217ENST00000495688 COL17A1Q9UMD9 1497 aaPredicted RBP17.39■□□□□ 0.38
PTPN7-217ENST00000495688 MYO5CQ9NQX4 1742 aa17.38■□□□□ 0.37
PTPN7-217ENST00000495688 ERCC6L2Q5T890 1561 aa17.37■□□□□ 0.37
PTPN7-217ENST00000495688 PRDM15P57071 1507 aaPredicted RBP17.37■□□□□ 0.37
PTPN7-217ENST00000495688 ERBINQ96RT1 1412 aa17.36■□□□□ 0.37
PTPN7-217ENST00000495688 MAST1Q9Y2H9 1570 aa17.36■□□□□ 0.37
PTPN7-217ENST00000495688 NBR1Q14596 966 aa17.36■□□□□ 0.37
PTPN7-217ENST00000495688 PLIN1O60240 522 aa17.35■□□□□ 0.37
PTPN7-217ENST00000495688 CHD1O14646 1710 aa17.35■□□□□ 0.37
PTPN7-217ENST00000495688 IQGAP3Q86VI3 1631 aa17.35■□□□□ 0.37
PTPN7-217ENST00000495688 ANP32AP39687 249 aaKnown RBP17.33■□□□□ 0.36
PTPN7-217ENST00000495688 TMF1P82094 1093 aa17.33■□□□□ 0.36
PTPN7-217ENST00000495688 PDE3BQ13370 1112 aa17.32■□□□□ 0.36
PTPN7-217ENST00000495688 PLXNC1O60486 1568 aa17.32■□□□□ 0.36
PTPN7-217ENST00000495688 IPO9Q96P70 1041 aaKnown RBP17.32■□□□□ 0.36
PTPN7-217ENST00000495688 WASHC2CQ9Y4E1 1318 aa17.3■□□□□ 0.36
PTPN7-217ENST00000495688 LAMC1P11047 1609 aa17.3■□□□□ 0.36
PTPN7-217ENST00000495688 DUOX2Q9NRD8 1548 aa17.3■□□□□ 0.36
PTPN7-217ENST00000495688 SKAP1Q86WV1 359 aa17.3■□□□□ 0.36
PTPN7-217ENST00000495688 NPM2Q86SE8 214 aaKnown RBP17.29■□□□□ 0.36
PTPN7-217ENST00000495688 ABCC2Q92887 1545 aa17.29■□□□□ 0.36
PTPN7-217ENST00000495688 ADAMTS8Q9UP79 889 aa17.28■□□□□ 0.36
PTPN7-217ENST00000495688 BLMP54132 1417 aaPredicted RBP17.28■□□□□ 0.36
PTPN7-217ENST00000495688 ATP10AO60312 1499 aa17.28■□□□□ 0.36
PTPN7-217ENST00000495688 EIF2AK4Q9P2K8 1649 aaKnown RBP17.28■□□□□ 0.36
PTPN7-217ENST00000495688 TRAPPC8Q9Y2L5 1435 aa17.28■□□□□ 0.36
PTPN7-217ENST00000495688 MAGI2Q86UL8 1455 aa17.28■□□□□ 0.36
PTPN7-217ENST00000495688 SHROOM2Q13796 1616 aa17.27■□□□□ 0.35
PTPN7-217ENST00000495688 DEKP35659 375 aaKnown RBP17.26■□□□□ 0.35
PTPN7-217ENST00000495688 EFCAB2Q5VUJ9 269 aa17.25■□□□□ 0.35
PTPN7-217ENST00000495688 AFAP1Q8N556 730 aa17.25■□□□□ 0.35
PTPN7-217ENST00000495688 ZBTB47Q9UFB7 747 aaPredicted RBP17.25■□□□□ 0.35
PTPN7-217ENST00000495688 PLCH2O75038 1416 aa17.25■□□□□ 0.35
PTPN7-217ENST00000495688 CRBNQ96SW2 442 aa17.25■□□□□ 0.35
PTPN7-217ENST00000495688 WDR7Q9Y4E6 1490 aa17.25■□□□□ 0.35
PTPN7-217ENST00000495688 C20orf194Q5TEA3 1177 aa17.24■□□□□ 0.35
PTPN7-217ENST00000495688 RNF17Q9BXT8 1623 aaKnown RBP17.24■□□□□ 0.35
PTPN7-217ENST00000495688 PDE4AP27815 886 aa17.24■□□□□ 0.35
PTPN7-217ENST00000495688 TCERG1O14776 1098 aaKnown RBP17.23■□□□□ 0.35
PTPN7-217ENST00000495688 KNSTRNQ9Y448 316 aa17.23■□□□□ 0.35
PTPN7-217ENST00000495688 PPP2R1AP30153 589 aa17.22■□□□□ 0.35
PTPN7-217ENST00000495688 AMER1Q5JTC6 1135 aaPredicted RBP17.21■□□□□ 0.35
PTPN7-217ENST00000495688 PLEKHH1Q9ULM0 1364 aa17.21■□□□□ 0.34
PTPN7-217ENST00000495688 ABCC1P33527 1531 aa17.2■□□□□ 0.34
PTPN7-217ENST00000495688 MADDQ8WXG6 1647 aa17.2■□□□□ 0.34
PTPN7-217ENST00000495688 SPAG9O60271 1321 aaKnown RBP17.2■□□□□ 0.34
PTPN7-217ENST00000495688 ZMYM4Q5VZL5 1548 aa17.2■□□□□ 0.34
PTPN7-217ENST00000495688 ZCCHC11Q5TAX3 1644 aaKnown RBP17.2■□□□□ 0.34
PTPN7-217ENST00000495688 BACH2Q9BYV9 841 aa17.2■□□□□ 0.34
PTPN7-217ENST00000495688 MYT1LQ9UL68 1186 aa17.18■□□□□ 0.34
PTPN7-217ENST00000495688 INSRP06213 1382 aa17.18■□□□□ 0.34
PTPN7-217ENST00000495688 WDR43Q15061 677 aaKnown RBP eCLIP17.18■□□□□ 0.34
PTPN7-217ENST00000495688 IQGAP1P46940 1657 aa17.17■□□□□ 0.34
PTPN7-217ENST00000495688 DUSP27Q5VZP5 1158 aa17.16■□□□□ 0.34
PTPN7-217ENST00000495688 CCDC146Q8IYE0 955 aa17.15■□□□□ 0.34
PTPN7-217ENST00000495688 CLTCL1P53675 1640 aa17.15■□□□□ 0.34
PTPN7-217ENST00000495688 TRPM2O94759 1503 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 96.8 ms