RNA–Protein interactions for RNA: ENST00000495520.5

LINC01558-202, Transcript of long intergenic non-protein coding RNA 1558, humanhuman

TSL 2 BASIC

Gene LINC01558, Length 1,652 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558-202ENST00000495520 ZMYM4Q5VZL5 1548 aa28.89■■■□□ 2.22
LINC01558-202ENST00000495520 FOXD1Q16676 465 aa28.87■■■□□ 2.21
LINC01558-202ENST00000495520 NUP155O75694 1391 aa28.87■■■□□ 2.21
LINC01558-202ENST00000495520 ABCA6Q8N139 1617 aa28.86■■■□□ 2.21
LINC01558-202ENST00000495520 RPRD2Q5VT52 1461 aaKnown RBP28.85■■■□□ 2.21
LINC01558-202ENST00000495520 ERBINQ96RT1 1412 aa28.84■■■□□ 2.21
LINC01558-202ENST00000495520 YEATS2Q9ULM3 1422 aa28.84■■■□□ 2.21
LINC01558-202ENST00000495520 DIP2CQ9Y2E4 1556 aa28.82■■■□□ 2.2
LINC01558-202ENST00000495520 UNC13BO14795 1591 aa28.81■■■□□ 2.2
LINC01558-202ENST00000495520 MAGI2Q86UL8 1455 aa28.81■■■□□ 2.2
LINC01558-202ENST00000495520 A2MP01023 1474 aa28.81■■■□□ 2.2
LINC01558-202ENST00000495520 DHX29Q7Z478 1369 aaKnown RBP28.81■■■□□ 2.2
LINC01558-202ENST00000495520 PKD2Q13563 968 aa28.8■■■□□ 2.2
LINC01558-202ENST00000495520 FAM135AQ9P2D6 1515 aa28.74■■■□□ 2.19
LINC01558-202ENST00000495520 EIF2AK4Q9P2K8 1649 aaKnown RBP28.72■■■□□ 2.19
LINC01558-202ENST00000495520 KIF3BO15066 747 aa28.72■■■□□ 2.19
LINC01558-202ENST00000495520 L3MBTL2Q969R5 705 aa28.71■■■□□ 2.19
LINC01558-202ENST00000495520 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.71■■■□□ 2.19
LINC01558-202ENST00000495520 ARHGEF40Q8TER5 1519 aa28.71■■■□□ 2.19
LINC01558-202ENST00000495520 ATP10AO60312 1499 aa28.7■■■□□ 2.19
LINC01558-202ENST00000495520 IQGAP3Q86VI3 1631 aa28.69■■■□□ 2.18
LINC01558-202ENST00000495520 DEPDC5O75140 1603 aa28.64■■■□□ 2.18
LINC01558-202ENST00000495520 REREQ9P2R6 1566 aa28.62■■■□□ 2.17
LINC01558-202ENST00000495520 BCORL1Q5H9F3 1711 aa28.6■■■□□ 2.17
LINC01558-202ENST00000495520 GGT6Q6P531 493 aa28.59■■■□□ 2.17
LINC01558-202ENST00000495520 RNF17Q9BXT8 1623 aaKnown RBP28.59■■■□□ 2.17
LINC01558-202ENST00000495520 MROH1Q8NDA8 1641 aa28.58■■■□□ 2.17
LINC01558-202ENST00000495520 PRDM15P57071 1507 aaPredicted RBP28.57■■■□□ 2.16
LINC01558-202ENST00000495520 KANK1Q14678 1352 aa28.57■■■□□ 2.16
LINC01558-202ENST00000495520 SIGLEC1Q9BZZ2 1709 aa28.56■■■□□ 2.16
LINC01558-202ENST00000495520 PLA2R1Q13018 1463 aa28.54■■■□□ 2.16
LINC01558-202ENST00000495520 AGLP35573 1532 aa28.54■■■□□ 2.16
LINC01558-202ENST00000495520 VWDEQ8N2E2 1590 aa28.52■■■□□ 2.16
LINC01558-202ENST00000495520 NBPF8Q3BBV2 869 aa28.51■■■□□ 2.16
LINC01558-202ENST00000495520 ARID4BQ4LE39 1312 aaPredicted RBP28.49■■■□□ 2.15
LINC01558-202ENST00000495520 UHRF1BP1Q6BDS2 1440 aa28.46■■■□□ 2.15
LINC01558-202ENST00000495520 MLECQ14165 292 aa28.46■■■□□ 2.15
LINC01558-202ENST00000495520 CEP152O94986 1710 aa28.46■■■□□ 2.15
LINC01558-202ENST00000495520 WASHC2CQ9Y4E1 1318 aa28.45■■■□□ 2.14
LINC01558-202ENST00000495520 MIER1Q8N108 512 aa28.44■■■□□ 2.14
LINC01558-202ENST00000495520 TET3O43151 1660 aa28.44■■■□□ 2.14
LINC01558-202ENST00000495520 CCDC144AA2RUR9 1427 aa28.43■■■□□ 2.14
LINC01558-202ENST00000495520 ABCC3O15438 1527 aa28.42■■■□□ 2.14
LINC01558-202ENST00000495520 LMTK2Q8IWU2 1503 aa28.41■■■□□ 2.14
LINC01558-202ENST00000495520 E9PCH4 1651 aa28.4■■■□□ 2.14
LINC01558-202ENST00000495520 PTPRTO14522 1441 aa28.39■■■□□ 2.14
LINC01558-202ENST00000495520 ZC3H13Q5T200 1668 aaKnown RBP28.38■■■□□ 2.13
LINC01558-202ENST00000495520 EFCAB6Q5THR3 1501 aa28.38■■■□□ 2.13
LINC01558-202ENST00000495520 EIF4G2P78344 907 aaKnown RBP eCLIP28.37■■■□□ 2.13
LINC01558-202ENST00000495520 HSPA5P11021 654 aaKnown RBP28.36■■■□□ 2.13
LINC01558-202ENST00000495520 HIRIP3Q9BW71 556 aaPredicted RBP28.36■■■□□ 2.13
LINC01558-202ENST00000495520 CAMSAP1Q5T5Y3 1602 aa28.35■■■□□ 2.13
LINC01558-202ENST00000495520 SPATA31E1Q6ZUB1 1445 aa28.34■■■□□ 2.13
LINC01558-202ENST00000495520 PPP6R1Q9UPN7 881 aa28.33■■■□□ 2.13
LINC01558-202ENST00000495520 TRPM2O94759 1503 aa28.32■■■□□ 2.12
LINC01558-202ENST00000495520 CLTCQ00610 1675 aaKnown RBP28.3■■■□□ 2.12
LINC01558-202ENST00000495520 ESF1Q9H501 851 aaKnown RBP28.3■■■□□ 2.12
LINC01558-202ENST00000495520 RALGAPBQ86X10 1494 aa28.3■■■□□ 2.12
LINC01558-202ENST00000495520 NPATQ14207 1427 aa28.29■■■□□ 2.12
LINC01558-202ENST00000495520 DDX10Q13206 875 aaKnown RBP28.26■■■□□ 2.12
LINC01558-202ENST00000495520 DCAF11Q8TEB1 546 aa28.26■■■□□ 2.12
LINC01558-202ENST00000495520 SPHKAPQ2M3C7 1700 aa28.26■■■□□ 2.11
LINC01558-202ENST00000495520 ARHGAP31Q2M1Z3 1444 aa28.24■■■□□ 2.11
LINC01558-202ENST00000495520 PRAG1Q86YV5 1406 aa28.22■■■□□ 2.11
LINC01558-202ENST00000495520 NEURL4Q96JN8 1562 aa28.2■■■□□ 2.11
LINC01558-202ENST00000495520 CFAP65Q6ZU64 1925 aaKnown RBP28.2■■■□□ 2.11
LINC01558-202ENST00000495520 KDM2AQ9Y2K7 1162 aa28.19■■■□□ 2.1
LINC01558-202ENST00000495520 WASHC2AQ641Q2 1341 aa28.19■■■□□ 2.1
LINC01558-202ENST00000495520 CLTCL1P53675 1640 aa28.18■■■□□ 2.1
LINC01558-202ENST00000495520 CNTLNQ9NXG0 1405 aa28.18■■■□□ 2.1
LINC01558-202ENST00000495520 ZNF326Q5BKZ1 582 aaKnown RBP28.17■■■□□ 2.1
LINC01558-202ENST00000495520 FER1L4A9Z1Z3 1794 aa28.17■■■□□ 2.1
LINC01558-202ENST00000495520 RGL3Q3MIN7 710 aa28.16■■■□□ 2.1
LINC01558-202ENST00000495520 STAC3Q96MF2 364 aa28.16■■■□□ 2.1
LINC01558-202ENST00000495520 ZMYM3Q14202 1370 aa28.16■■■□□ 2.1
LINC01558-202ENST00000495520 UGGT1Q9NYU2 1555 aa28.14■■■□□ 2.1
LINC01558-202ENST00000495520 USP47Q96K76 1375 aa28.14■■■□□ 2.1
LINC01558-202ENST00000495520 PREX1Q8TCU6 1659 aa28.14■■■□□ 2.09
LINC01558-202ENST00000495520 NOS1P29475 1434 aa28.13■■■□□ 2.09
LINC01558-202ENST00000495520 FBXO31Q5XUX0 539 aaPredicted RBP28.13■■■□□ 2.09
LINC01558-202ENST00000495520 GPRASP1Q5JY77 1395 aa28.12■■■□□ 2.09
LINC01558-202ENST00000495520 MROH2AA6NES4 1674 aa28.12■■■□□ 2.09
LINC01558-202ENST00000495520 C11orf95C9JLR9 678 aaPredicted RBP28.12■■■□□ 2.09
LINC01558-202ENST00000495520 TRPM1Q7Z4N2 1603 aa28.12■■■□□ 2.09
LINC01558-202ENST00000495520 CCDC7Q96M83 1385 aa28.11■■■□□ 2.09
LINC01558-202ENST00000495520 SYNMO15061 1565 aa28.11■■■□□ 2.09
LINC01558-202ENST00000495520 ERVK-7P63135 1459 aa28.1■■■□□ 2.09
LINC01558-202ENST00000495520 MADDQ8WXG6 1647 aa28.1■■■□□ 2.09
LINC01558-202ENST00000495520 CARD11Q9BXL7 1154 aa28.1■■■□□ 2.09
LINC01558-202ENST00000495520 ADAMTSL3P82987 1691 aa28.06■■■□□ 2.08
LINC01558-202ENST00000495520 LAMC1P11047 1609 aa28.06■■■□□ 2.08
LINC01558-202ENST00000495520 PLPPR3Q6T4P5 718 aa28.06■■■□□ 2.08
LINC01558-202ENST00000495520 SPATA31D1Q6ZQQ2 1576 aa28.06■■■□□ 2.08
LINC01558-202ENST00000495520 POLR1AO95602 1720 aaPredicted RBP28.05■■■□□ 2.08
LINC01558-202ENST00000495520 ROCK2O75116 1388 aaKnown RBP28.05■■■□□ 2.08
LINC01558-202ENST00000495520 RIMS1Q86UR5 1692 aaKnown RBP28.04■■■□□ 2.08
LINC01558-202ENST00000495520 CEBPAP49715 358 aaPredicted RBP28.04■■■□□ 2.08
LINC01558-202ENST00000495520 C3P01024 1663 aa28.03■■■□□ 2.08
LINC01558-202ENST00000495520 PIK3C2BO00750 1634 aa28.02■■■□□ 2.08
LINC01558-202ENST00000495520 KIF7Q2M1P5 1343 aa28.02■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms