RNA–Protein interactions for RNA: ENST00000494649.5

APTX-230, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 2,099 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-230ENST00000494649 ANKRD50Q9ULJ7 1429 aa16.82■□□□□ 0.28
APTX-230ENST00000494649 ERBINQ96RT1 1412 aa16.82■□□□□ 0.28
APTX-230ENST00000494649 WASHC2CQ9Y4E1 1318 aa16.82■□□□□ 0.28
APTX-230ENST00000494649 CLTCQ00610 1675 aaKnown RBP16.81■□□□□ 0.28
APTX-230ENST00000494649 ROCK1Q13464 1354 aa16.81■□□□□ 0.28
APTX-230ENST00000494649 EIF2AK4Q9P2K8 1649 aaKnown RBP16.79■□□□□ 0.28
APTX-230ENST00000494649 MROH1Q8NDA8 1641 aa16.77■□□□□ 0.28
APTX-230ENST00000494649 ZMYM3Q14202 1370 aa16.77■□□□□ 0.27
APTX-230ENST00000494649 RNF17Q9BXT8 1623 aaKnown RBP16.76■□□□□ 0.27
APTX-230ENST00000494649 NAIPQ13075 1403 aa16.75■□□□□ 0.27
APTX-230ENST00000494649 C3P01024 1663 aa16.75■□□□□ 0.27
APTX-230ENST00000494649 KDM5DQ9BY66 1539 aa16.75■□□□□ 0.27
APTX-230ENST00000494649 CNTLNQ9NXG0 1405 aa16.74■□□□□ 0.27
APTX-230ENST00000494649 FBXO31Q5XUX0 539 aaPredicted RBP16.74■□□□□ 0.27
APTX-230ENST00000494649 CEP152O94986 1710 aa16.74■□□□□ 0.27
APTX-230ENST00000494649 ABCC3O15438 1527 aa16.73■□□□□ 0.27
APTX-230ENST00000494649 PRDM15P57071 1507 aaPredicted RBP16.72■□□□□ 0.27
APTX-230ENST00000494649 HFM1A2PYH4 1435 aa16.71■□□□□ 0.27
APTX-230ENST00000494649 PPP6R1Q9UPN7 881 aa16.71■□□□□ 0.27
APTX-230ENST00000494649 DEPDC5O75140 1603 aa16.71■□□□□ 0.27
APTX-230ENST00000494649 KANK1Q14678 1352 aa16.71■□□□□ 0.26
APTX-230ENST00000494649 GCC2Q8IWJ2 1684 aa16.7■□□□□ 0.26
APTX-230ENST00000494649 TRIM52Q96A61 297 aa16.69■□□□□ 0.26
APTX-230ENST00000494649 NUP155O75694 1391 aa16.69■□□□□ 0.26
APTX-230ENST00000494649 MROH2AA6NES4 1674 aa16.68■□□□□ 0.26
APTX-230ENST00000494649 CFAP65Q6ZU64 1925 aaKnown RBP16.67■□□□□ 0.26
APTX-230ENST00000494649 CAMSAP1Q5T5Y3 1602 aa16.67■□□□□ 0.26
APTX-230ENST00000494649 HSPA2P54652 639 aa16.66■□□□□ 0.26
APTX-230ENST00000494649 ZC3H13Q5T200 1668 aaKnown RBP16.66■□□□□ 0.26
APTX-230ENST00000494649 UNC13BO14795 1591 aa16.66■□□□□ 0.26
APTX-230ENST00000494649 PZPP20742 1482 aa16.65■□□□□ 0.26
APTX-230ENST00000494649 VWDEQ8N2E2 1590 aa16.64■□□□□ 0.25
APTX-230ENST00000494649 NPATQ14207 1427 aa16.64■□□□□ 0.25
APTX-230ENST00000494649 SETD5Q9C0A6 1442 aa16.63■□□□□ 0.25
APTX-230ENST00000494649 LMTK3Q96Q04 1460 aa16.62■□□□□ 0.25
APTX-230ENST00000494649 FAM135AQ9P2D6 1515 aa16.62■□□□□ 0.25
APTX-230ENST00000494649 RAB3GAP2Q9H2M9 1393 aa16.61■□□□□ 0.25
APTX-230ENST00000494649 UHRF1BP1Q6BDS2 1440 aa16.61■□□□□ 0.25
APTX-230ENST00000494649 TNRQ92752 1358 aa16.6■□□□□ 0.25
APTX-230ENST00000494649 EFCAB6Q5THR3 1501 aa16.6■□□□□ 0.25
APTX-230ENST00000494649 IQGAP3Q86VI3 1631 aa16.59■□□□□ 0.25
APTX-230ENST00000494649 LMTK2Q8IWU2 1503 aa16.59■□□□□ 0.25
APTX-230ENST00000494649 ERVK-7P63135 1459 aa16.59■□□□□ 0.25
APTX-230ENST00000494649 PREX1Q8TCU6 1659 aa16.59■□□□□ 0.25
APTX-230ENST00000494649 TRIM26Q12899 539 aaPredicted RBP16.58■□□□□ 0.25
APTX-230ENST00000494649 FOXD1Q16676 465 aa16.58■□□□□ 0.25
APTX-230ENST00000494649 SLC4A1APQ9BWU0 796 aaKnown RBP16.58■□□□□ 0.24
APTX-230ENST00000494649 TET3O43151 1660 aa16.58■□□□□ 0.24
APTX-230ENST00000494649 MYO3AQ8NEV4 1616 aa16.58■□□□□ 0.24
APTX-230ENST00000494649 ARHGAP31Q2M1Z3 1444 aa16.56■□□□□ 0.24
APTX-230ENST00000494649 E9PCH4 1651 aa16.56■□□□□ 0.24
APTX-230ENST00000494649 SPATA31D1Q6ZQQ2 1576 aa16.55■□□□□ 0.24
APTX-230ENST00000494649 SETD1BQ9UPS6 1966 aaKnown RBP16.55■□□□□ 0.24
APTX-230ENST00000494649 PKD2Q13563 968 aa16.55■□□□□ 0.24
APTX-230ENST00000494649 UGGT1Q9NYU2 1555 aa16.53■□□□□ 0.24
APTX-230ENST00000494649 CEP170BQ9Y4F5 1589 aaPredicted RBP16.53■□□□□ 0.24
APTX-230ENST00000494649 SYNMO15061 1565 aa16.52■□□□□ 0.24
APTX-230ENST00000494649 MPHOSPH9Q99550 1183 aa16.52■□□□□ 0.23
APTX-230ENST00000494649 IDI1Q13907 227 aa16.51■□□□□ 0.23
APTX-230ENST00000494649 NOS1P29475 1434 aa16.5■□□□□ 0.23
APTX-230ENST00000494649 STAG3Q9UJ98 1225 aa16.5■□□□□ 0.23
APTX-230ENST00000494649 RPRD2Q5VT52 1461 aaKnown RBP16.5■□□□□ 0.23
APTX-230ENST00000494649 CHGAP10645 457 aaKnown RBP16.5■□□□□ 0.23
APTX-230ENST00000494649 PCGF6Q9BYE7 350 aa16.49■□□□□ 0.23
APTX-230ENST00000494649 SENP3Q9H4L4 574 aaPredicted RBP16.49■□□□□ 0.23
APTX-230ENST00000494649 A2ML1A8K2U0 1454 aa16.49■□□□□ 0.23
APTX-230ENST00000494649 ILDR1Q86SU0 546 aaPredicted RBP16.49■□□□□ 0.23
APTX-230ENST00000494649 NLRP1Q9C000 1473 aa16.48■□□□□ 0.23
APTX-230ENST00000494649 ZNF142P52746 1687 aaPredicted RBP16.47■□□□□ 0.23
APTX-230ENST00000494649 PIK3C2BO00750 1634 aa16.47■□□□□ 0.23
APTX-230ENST00000494649 NCKAP5LQ9HCH0 1330 aa16.47■□□□□ 0.23
APTX-230ENST00000494649 SPHKAPQ2M3C7 1700 aa16.44■□□□□ 0.22
APTX-230ENST00000494649 THEMISQ8N1K5 641 aaPredicted RBP16.44■□□□□ 0.22
APTX-230ENST00000494649 NUTM2DQ5VT03 806 aaPredicted RBP16.43■□□□□ 0.22
APTX-230ENST00000494649 SLC52A1Q9NWF4 448 aa16.43■□□□□ 0.22
APTX-230ENST00000494649 PLA2R1Q13018 1463 aa16.43■□□□□ 0.22
APTX-230ENST00000494649 UBR1Q8IWV7 1749 aa16.43■□□□□ 0.22
APTX-230ENST00000494649 PTPRTO14522 1441 aa16.41■□□□□ 0.22
APTX-230ENST00000494649 STRCQ7RTU9 1775 aa16.41■□□□□ 0.22
APTX-230ENST00000494649 CLTCL1P53675 1640 aa16.4■□□□□ 0.22
APTX-230ENST00000494649 MYO5BQ9ULV0 1848 aa16.39■□□□□ 0.21
APTX-230ENST00000494649 TRPM2O94759 1503 aa16.39■□□□□ 0.21
APTX-230ENST00000494649 ADGRB3O60242 1522 aa16.39■□□□□ 0.21
APTX-230ENST00000494649 HRCP23327 699 aa16.39■□□□□ 0.21
APTX-230ENST00000494649 LTKP29376 864 aa16.38■□□□□ 0.21
APTX-230ENST00000494649 ZNF326Q5BKZ1 582 aaKnown RBP16.38■□□□□ 0.21
APTX-230ENST00000494649 TXNDC2Q86VQ3 553 aa16.38■□□□□ 0.21
APTX-230ENST00000494649 ANKLE2Q86XL3 938 aa16.38■□□□□ 0.21
APTX-230ENST00000494649 TMEM2Q9UHN6 1383 aa16.36■□□□□ 0.21
APTX-230ENST00000494649 TMEM131LA2VDJ0 1609 aa16.36■□□□□ 0.21
APTX-230ENST00000494649 CCDC144AA2RUR9 1427 aa16.36■□□□□ 0.21
APTX-230ENST00000494649 RGL3Q3MIN7 710 aa16.35■□□□□ 0.21
APTX-230ENST00000494649 ACIN1Q9UKV3 1341 aaKnown RBP16.35■□□□□ 0.21
APTX-230ENST00000494649 BCANQ96GW7 911 aa16.34■□□□□ 0.21
APTX-230ENST00000494649 EID1Q9Y6B2 187 aa16.34■□□□□ 0.21
APTX-230ENST00000494649 PPP1R15AO75807 674 aaPredicted RBP16.33■□□□□ 0.21
APTX-230ENST00000494649 NEURL4Q96JN8 1562 aa16.33■□□□□ 0.2
APTX-230ENST00000494649 POLR1AO95602 1720 aaPredicted RBP16.32■□□□□ 0.2
APTX-230ENST00000494649 SCAF11Q99590 1463 aaKnown RBP16.32■□□□□ 0.2
APTX-230ENST00000494649 RIMS2Q9UQ26 1411 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 97.2 ms