RNA–Protein interactions for RNA: ENST00000494397.5

ARHGAP4-223, Transcript of Rho GTPase activating protein 4, human

TSL 5

Gene ARHGAP4, Length 1,752 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARHGAP4-223	ENST00000494397	PLA2R1	Q13018	1463 aa		31.74	■■■□□ 2.67
ARHGAP4-223	ENST00000494397	CYB5RL	Q6IPT4	315 aa		31.73	■■■□□ 2.67
ARHGAP4-223	ENST00000494397	DHX29	Q7Z478	1369 aa	Known RBP	31.73	■■■□□ 2.67
ARHGAP4-223	ENST00000494397	DEPDC5	O75140	1603 aa		31.73	■■■□□ 2.67
ARHGAP4-223	ENST00000494397	POGZ	Q7Z3K3	1410 aa		31.72	■■■□□ 2.67
ARHGAP4-223	ENST00000494397	NEO1	Q92859	1461 aa		31.72	■■■□□ 2.67
ARHGAP4-223	ENST00000494397	EIF2AK4	Q9P2K8	1649 aa	Known RBP	31.71	■■■□□ 2.67
ARHGAP4-223	ENST00000494397	KDM5C	P41229	1560 aa		31.7	■■■□□ 2.66
ARHGAP4-223	ENST00000494397	MYT1L	Q9UL68	1186 aa		31.68	■■■□□ 2.66
ARHGAP4-223	ENST00000494397	KIDINS220	Q9ULH0	1771 aa		31.66	■■■□□ 2.66
ARHGAP4-223	ENST00000494397	SPATA31E1	Q6ZUB1	1445 aa		31.66	■■■□□ 2.66
ARHGAP4-223	ENST00000494397	MLH3	Q9UHC1	1453 aa		31.65	■■■□□ 2.66
ARHGAP4-223	ENST00000494397	GLI2	P10070	1586 aa		31.64	■■■□□ 2.66
ARHGAP4-223	ENST00000494397	VWDE	Q8N2E2	1590 aa		31.64	■■■□□ 2.66
ARHGAP4-223	ENST00000494397	KANK1	Q14678	1352 aa		31.64	■■■□□ 2.66
ARHGAP4-223	ENST00000494397	RALGAPB	Q86X10	1494 aa		31.62	■■■□□ 2.65
ARHGAP4-223	ENST00000494397	PRDM15	P57071	1507 aa	Predicted RBP	31.61	■■■□□ 2.65
ARHGAP4-223	ENST00000494397	MAP3K4	Q9Y6R4	1608 aa		31.6	■■■□□ 2.65
ARHGAP4-223	ENST00000494397	WASHC2A	Q641Q2	1341 aa		31.59	■■■□□ 2.65
ARHGAP4-223	ENST00000494397	KIF3B	O15066	747 aa		31.58	■■■□□ 2.65
ARHGAP4-223	ENST00000494397	A2M	P01023	1474 aa		31.58	■■■□□ 2.65
ARHGAP4-223	ENST00000494397	ZNF326	Q5BKZ1	582 aa	Known RBP	31.58	■■■□□ 2.65
ARHGAP4-223	ENST00000494397	YTHDC1	Q96MU7	727 aa	Known RBP	31.58	■■■□□ 2.65
ARHGAP4-223	ENST00000494397	HECW2	Q9P2P5	1572 aa		31.57	■■■□□ 2.65
ARHGAP4-223	ENST00000494397	TET3	O43151	1660 aa		31.57	■■■□□ 2.64
ARHGAP4-223	ENST00000494397	DCAF11	Q8TEB1	546 aa		31.57	■■■□□ 2.64
ARHGAP4-223	ENST00000494397		E9PCH4	1651 aa		31.55	■■■□□ 2.64
ARHGAP4-223	ENST00000494397	MROH1	Q8NDA8	1641 aa		31.55	■■■□□ 2.64
ARHGAP4-223	ENST00000494397	PTPRT	O14522	1441 aa		31.54	■■■□□ 2.64
ARHGAP4-223	ENST00000494397	TRPM2	O94759	1503 aa		31.53	■■■□□ 2.64
ARHGAP4-223	ENST00000494397	USP47	Q96K76	1375 aa		31.52	■■■□□ 2.64
ARHGAP4-223	ENST00000494397	CCDC7	Q96M83	1385 aa		31.51	■■■□□ 2.63
ARHGAP4-223	ENST00000494397	KDM2A	Q9Y2K7	1162 aa		31.51	■■■□□ 2.63
ARHGAP4-223	ENST00000494397	ANP32C	O43423	234 aa		31.5	■■■□□ 2.63
ARHGAP4-223	ENST00000494397	PRAG1	Q86YV5	1406 aa		31.49	■■■□□ 2.63
ARHGAP4-223	ENST00000494397	RNF17	Q9BXT8	1623 aa	Known RBP	31.48	■■■□□ 2.63
ARHGAP4-223	ENST00000494397	FRMPD1	Q5SYB0	1578 aa		31.47	■■■□□ 2.63
ARHGAP4-223	ENST00000494397	LMTK2	Q8IWU2	1503 aa		31.47	■■■□□ 2.63
ARHGAP4-223	ENST00000494397	DIP2B	Q9P265	1576 aa		31.45	■■■□□ 2.63
ARHGAP4-223	ENST00000494397	RGL3	Q3MIN7	710 aa		31.44	■■■□□ 2.62
ARHGAP4-223	ENST00000494397	C11orf95	C9JLR9	678 aa	Predicted RBP	31.43	■■■□□ 2.62
ARHGAP4-223	ENST00000494397	CARD11	Q9BXL7	1154 aa		31.43	■■■□□ 2.62
ARHGAP4-223	ENST00000494397	ABCA6	Q8N139	1617 aa		31.43	■■■□□ 2.62
ARHGAP4-223	ENST00000494397	SPHKAP	Q2M3C7	1700 aa		31.43	■■■□□ 2.62
ARHGAP4-223	ENST00000494397	BCORL1	Q5H9F3	1711 aa		31.43	■■■□□ 2.62
ARHGAP4-223	ENST00000494397	CCER2	I3L3R5	266 aa		31.42	■■■□□ 2.62
ARHGAP4-223	ENST00000494397	RAPGEF3	O95398	923 aa		31.42	■■■□□ 2.62
ARHGAP4-223	ENST00000494397	CNTLN	Q9NXG0	1405 aa		31.42	■■■□□ 2.62
ARHGAP4-223	ENST00000494397	EFCAB6	Q5THR3	1501 aa		31.42	■■■□□ 2.62
ARHGAP4-223	ENST00000494397	FAM69C	Q0P6D2	419 aa		31.4	■■■□□ 2.62
ARHGAP4-223	ENST00000494397	KIF7	Q2M1P5	1343 aa		31.39	■■■□□ 2.62
ARHGAP4-223	ENST00000494397	ROCK2	O75116	1388 aa	Known RBP	31.39	■■■□□ 2.61
ARHGAP4-223	ENST00000494397	POLR1A	O95602	1720 aa	Predicted RBP	31.38	■■■□□ 2.61
ARHGAP4-223	ENST00000494397	RICTOR	Q6R327	1708 aa		31.38	■■■□□ 2.61
ARHGAP4-223	ENST00000494397	TRPM1	Q7Z4N2	1603 aa		31.38	■■■□□ 2.61
ARHGAP4-223	ENST00000494397	ARID4B	Q4LE39	1312 aa	Predicted RBP	31.37	■■■□□ 2.61
ARHGAP4-223	ENST00000494397	GPRASP1	Q5JY77	1395 aa		31.37	■■■□□ 2.61
ARHGAP4-223	ENST00000494397	DIP2C	Q9Y2E4	1556 aa		31.36	■■■□□ 2.61
ARHGAP4-223	ENST00000494397	CLTCL1	P53675	1640 aa		31.35	■■■□□ 2.61
ARHGAP4-223	ENST00000494397	NEURL4	Q96JN8	1562 aa		31.35	■■■□□ 2.61
ARHGAP4-223	ENST00000494397	STAC3	Q96MF2	364 aa		31.35	■■■□□ 2.61
ARHGAP4-223	ENST00000494397	CEP152	O94986	1710 aa		31.33	■■■□□ 2.61
ARHGAP4-223	ENST00000494397	PPRC1	Q5VV67	1664 aa	Known RBP	31.32	■■■□□ 2.61
ARHGAP4-223	ENST00000494397	LAMC1	P11047	1609 aa		31.31	■■■□□ 2.6
ARHGAP4-223	ENST00000494397	ZMYM4	Q5VZL5	1548 aa		31.29	■■■□□ 2.6
ARHGAP4-223	ENST00000494397	SCAF1	Q9H7N4	1312 aa	Known RBP	31.26	■■■□□ 2.6
ARHGAP4-223	ENST00000494397	GGT6	Q6P531	493 aa		31.25	■■■□□ 2.59
ARHGAP4-223	ENST00000494397	ABCC3	O15438	1527 aa		31.25	■■■□□ 2.59
ARHGAP4-223	ENST00000494397	ST20-MTHFS	A0A0A6YYL1	179 aa		31.23	■■■□□ 2.59
ARHGAP4-223	ENST00000494397	YEATS2	Q9ULM3	1422 aa		31.23	■■■□□ 2.59
ARHGAP4-223	ENST00000494397	NBPF1	Q3BBV0	1214 aa		31.22	■■■□□ 2.59
ARHGAP4-223	ENST00000494397	MADD	Q8WXG6	1647 aa		31.21	■■■□□ 2.59
ARHGAP4-223	ENST00000494397	NPAT	Q14207	1427 aa		31.21	■■■□□ 2.59
ARHGAP4-223	ENST00000494397	WASHC2C	Q9Y4E1	1318 aa		31.2	■■■□□ 2.59
ARHGAP4-223	ENST00000494397	UGGT1	Q9NYU2	1555 aa		31.16	■■■□□ 2.58
ARHGAP4-223	ENST00000494397	MYOM2	P54296	1465 aa		31.14	■■■□□ 2.58
ARHGAP4-223	ENST00000494397	ZC3H13	Q5T200	1668 aa	Known RBP	31.12	■■■□□ 2.57
ARHGAP4-223	ENST00000494397	CAMSAP1	Q5T5Y3	1602 aa		31.12	■■■□□ 2.57
ARHGAP4-223	ENST00000494397	ARHGAP31	Q2M1Z3	1444 aa		31.12	■■■□□ 2.57
ARHGAP4-223	ENST00000494397	PRKRIP1	Q9H875	184 aa	Predicted RBP	31.1	■■■□□ 2.57
ARHGAP4-223	ENST00000494397	ADGRB3	O60242	1522 aa		31.09	■■■□□ 2.57
ARHGAP4-223	ENST00000494397	KIF1B	O60333	1816 aa		31.09	■■■□□ 2.57
ARHGAP4-223	ENST00000494397	NOS1	P29475	1434 aa		31.09	■■■□□ 2.57
ARHGAP4-223	ENST00000494397	RERE	Q9P2R6	1566 aa		31.09	■■■□□ 2.57
ARHGAP4-223	ENST00000494397	TSPOAP1	O95153	1857 aa		31.08	■■■□□ 2.57
ARHGAP4-223	ENST00000494397	POLR3GL	Q9BT43	218 aa		31.06	■■■□□ 2.56
ARHGAP4-223	ENST00000494397	GTF3C3	Q9Y5Q9	886 aa		31.05	■■■□□ 2.56
ARHGAP4-223	ENST00000494397	KIAA1210	Q9ULL0	1709 aa		31.04	■■■□□ 2.56
ARHGAP4-223	ENST00000494397	KIF13A	Q9H1H9	1805 aa		31.03	■■■□□ 2.56
ARHGAP4-223	ENST00000494397	AGL	P35573	1532 aa		31.02	■■■□□ 2.56
ARHGAP4-223	ENST00000494397	TESK2	Q96S53	571 aa		31.02	■■■□□ 2.56
ARHGAP4-223	ENST00000494397	COL17A1	Q9UMD9	1497 aa	Predicted RBP	31.02	■■■□□ 2.56
ARHGAP4-223	ENST00000494397	MROH2A	A6NES4	1674 aa		31.02	■■■□□ 2.56
ARHGAP4-223	ENST00000494397	NRXN1	Q9ULB1	1477 aa		31.01	■■■□□ 2.56
ARHGAP4-223	ENST00000494397	IFT172	Q9UG01	1749 aa		31.01	■■■□□ 2.55
ARHGAP4-223	ENST00000494397	SCAF11	Q99590	1463 aa	Known RBP	31	■■■□□ 2.55
ARHGAP4-223	ENST00000494397	IQGAP1	P46940	1657 aa		30.99	■■■□□ 2.55
ARHGAP4-223	ENST00000494397	RPGRIP1L	Q68CZ1	1315 aa		30.97	■■■□□ 2.55
ARHGAP4-223	ENST00000494397	PIK3C2B	O00750	1634 aa		30.96	■■■□□ 2.55
ARHGAP4-223	ENST00000494397	PPP6R1	Q9UPN7	881 aa		30.96	■■■□□ 2.55

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