RNA–Protein interactions for RNA: ENST00000494339.5

KPNA1-210, Transcript of karyopherin subunit alpha 1, humanhuman

TSL 2

Gene KPNA1, Length 1,923 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA1-210ENST00000494339 ZMYM4Q5VZL5 1548 aa30.1■■■□□ 2.41
KPNA1-210ENST00000494339 SIN3AQ96ST3 1273 aa30.1■■■□□ 2.41
KPNA1-210ENST00000494339 DIP2CQ9Y2E4 1556 aa30.08■■■□□ 2.41
KPNA1-210ENST00000494339 YEATS2Q9ULM3 1422 aa30.08■■■□□ 2.41
KPNA1-210ENST00000494339 KIF3BO15066 747 aa30.06■■■□□ 2.4
KPNA1-210ENST00000494339 FAM135AQ9P2D6 1515 aa30.06■■■□□ 2.4
KPNA1-210ENST00000494339 EIF2AK4Q9P2K8 1649 aaKnown RBP30.06■■■□□ 2.4
KPNA1-210ENST00000494339 NEUROD1Q13562 356 aa30.06■■■□□ 2.4
KPNA1-210ENST00000494339 MAGI2Q86UL8 1455 aa30.05■■■□□ 2.4
KPNA1-210ENST00000494339 PKD2Q13563 968 aa30.04■■■□□ 2.4
KPNA1-210ENST00000494339 DEPDC5O75140 1603 aa30.02■■■□□ 2.4
KPNA1-210ENST00000494339 IQGAP3Q86VI3 1631 aa30.02■■■□□ 2.4
KPNA1-210ENST00000494339 ANKRD30BQ9BXX2 1392 aa29.97■■■□□ 2.39
KPNA1-210ENST00000494339 MROH1Q8NDA8 1641 aa29.94■■■□□ 2.38
KPNA1-210ENST00000494339 PRDM15P57071 1507 aaPredicted RBP29.94■■■□□ 2.38
KPNA1-210ENST00000494339 RNF17Q9BXT8 1623 aaKnown RBP29.92■■■□□ 2.38
KPNA1-210ENST00000494339 ATP10AO60312 1499 aa29.92■■■□□ 2.38
KPNA1-210ENST00000494339 BCORL1Q5H9F3 1711 aa29.92■■■□□ 2.38
KPNA1-210ENST00000494339 KANK1Q14678 1352 aa29.92■■■□□ 2.38
KPNA1-210ENST00000494339 VWDEQ8N2E2 1590 aa29.89■■■□□ 2.38
KPNA1-210ENST00000494339 GGT6Q6P531 493 aa29.89■■■□□ 2.38
KPNA1-210ENST00000494339 ARHGEF40Q8TER5 1519 aa29.88■■■□□ 2.37
KPNA1-210ENST00000494339 TONSLQ96HA7 1378 aa29.84■■■□□ 2.37
KPNA1-210ENST00000494339 TET3O43151 1660 aa29.83■■■□□ 2.37
KPNA1-210ENST00000494339 REREQ9P2R6 1566 aa29.83■■■□□ 2.37
KPNA1-210ENST00000494339 CEP152O94986 1710 aa29.81■■■□□ 2.36
KPNA1-210ENST00000494339 E9PCH4 1651 aa29.81■■■□□ 2.36
KPNA1-210ENST00000494339 RPRD2Q5VT52 1461 aaKnown RBP29.81■■■□□ 2.36
KPNA1-210ENST00000494339 TIMELESSQ9UNS1 1208 aa29.81■■■□□ 2.36
KPNA1-210ENST00000494339 SIGLEC1Q9BZZ2 1709 aa29.79■■■□□ 2.36
KPNA1-210ENST00000494339 AGLP35573 1532 aa29.75■■■□□ 2.35
KPNA1-210ENST00000494339 WASHC2CQ9Y4E1 1318 aa29.75■■■□□ 2.35
KPNA1-210ENST00000494339 LMTK2Q8IWU2 1503 aa29.75■■■□□ 2.35
KPNA1-210ENST00000494339 PLA2R1Q13018 1463 aa29.74■■■□□ 2.35
KPNA1-210ENST00000494339 ABCC3O15438 1527 aa29.73■■■□□ 2.35
KPNA1-210ENST00000494339 EFCAB6Q5THR3 1501 aa29.73■■■□□ 2.35
KPNA1-210ENST00000494339 CCDC144AA2RUR9 1427 aa29.7■■■□□ 2.34
KPNA1-210ENST00000494339 SPHKAPQ2M3C7 1700 aa29.68■■■□□ 2.34
KPNA1-210ENST00000494339 PPP1R15AO75807 674 aaPredicted RBP29.67■■■□□ 2.34
KPNA1-210ENST00000494339 L3MBTL2Q969R5 705 aa29.67■■■□□ 2.34
KPNA1-210ENST00000494339 ZC3H13Q5T200 1668 aaKnown RBP29.67■■■□□ 2.34
KPNA1-210ENST00000494339 CAMSAP1Q5T5Y3 1602 aa29.66■■■□□ 2.34
KPNA1-210ENST00000494339 MLECQ14165 292 aa29.66■■■□□ 2.34
KPNA1-210ENST00000494339 CFAP65Q6ZU64 1925 aaKnown RBP29.64■■■□□ 2.34
KPNA1-210ENST00000494339 PTPRTO14522 1441 aa29.63■■■□□ 2.33
KPNA1-210ENST00000494339 NPATQ14207 1427 aa29.63■■■□□ 2.33
KPNA1-210ENST00000494339 ARID4BQ4LE39 1312 aaPredicted RBP29.63■■■□□ 2.33
KPNA1-210ENST00000494339 TRPM2O94759 1503 aa29.63■■■□□ 2.33
KPNA1-210ENST00000494339 PPP6R1Q9UPN7 881 aa29.57■■■□□ 2.32
KPNA1-210ENST00000494339 CLTCL1P53675 1640 aa29.55■■■□□ 2.32
KPNA1-210ENST00000494339 CLTCQ00610 1675 aaKnown RBP29.55■■■□□ 2.32
KPNA1-210ENST00000494339 ARHGAP31Q2M1Z3 1444 aa29.53■■■□□ 2.32
KPNA1-210ENST00000494339 UGGT1Q9NYU2 1555 aa29.52■■■□□ 2.32
KPNA1-210ENST00000494339 RGL3Q3MIN7 710 aa29.51■■■□□ 2.31
KPNA1-210ENST00000494339 CNTLNQ9NXG0 1405 aa29.48■■■□□ 2.31
KPNA1-210ENST00000494339 ESF1Q9H501 851 aaKnown RBP29.47■■■□□ 2.31
KPNA1-210ENST00000494339 NOS1P29475 1434 aa29.46■■■□□ 2.31
KPNA1-210ENST00000494339 DCAF11Q8TEB1 546 aa29.45■■■□□ 2.31
KPNA1-210ENST00000494339 SPATA31E1Q6ZUB1 1445 aa29.45■■■□□ 2.3
KPNA1-210ENST00000494339 PREX1Q8TCU6 1659 aa29.44■■■□□ 2.3
KPNA1-210ENST00000494339 NBPF8Q3BBV2 869 aa29.43■■■□□ 2.3
KPNA1-210ENST00000494339 KDM2AQ9Y2K7 1162 aa29.43■■■□□ 2.3
KPNA1-210ENST00000494339 SYNMO15061 1565 aa29.43■■■□□ 2.3
KPNA1-210ENST00000494339 ZNF326Q5BKZ1 582 aaKnown RBP29.42■■■□□ 2.3
KPNA1-210ENST00000494339 KIF1BO60333 1816 aa29.42■■■□□ 2.3
KPNA1-210ENST00000494339 FBXO31Q5XUX0 539 aaPredicted RBP29.41■■■□□ 2.3
KPNA1-210ENST00000494339 ZNF316A6NFI3 1004 aaPredicted RBP29.37■■■□□ 2.29
KPNA1-210ENST00000494339 ERVK-7P63135 1459 aa29.37■■■□□ 2.29
KPNA1-210ENST00000494339 ZMYM3Q14202 1370 aa29.37■■■□□ 2.29
KPNA1-210ENST00000494339 PIK3C2BO00750 1634 aa29.36■■■□□ 2.29
KPNA1-210ENST00000494339 MROH2AA6NES4 1674 aa29.35■■■□□ 2.29
KPNA1-210ENST00000494339 CHGAP10645 457 aaKnown RBP29.35■■■□□ 2.29
KPNA1-210ENST00000494339 UHRF1BP1Q6BDS2 1440 aa29.33■■■□□ 2.29
KPNA1-210ENST00000494339 NEURL4Q96JN8 1562 aa29.33■■■□□ 2.29
KPNA1-210ENST00000494339 FER1L4A9Z1Z3 1794 aa29.32■■■□□ 2.28
KPNA1-210ENST00000494339 ADGRB3O60242 1522 aa29.31■■■□□ 2.28
KPNA1-210ENST00000494339 SPATA31D1Q6ZQQ2 1576 aa29.3■■■□□ 2.28
KPNA1-210ENST00000494339 IDI1Q13907 227 aa29.3■■■□□ 2.28
KPNA1-210ENST00000494339 SLC52A1Q9NWF4 448 aa29.3■■■□□ 2.28
KPNA1-210ENST00000494339 PRAG1Q86YV5 1406 aa29.28■■■□□ 2.28
KPNA1-210ENST00000494339 RALGAPBQ86X10 1494 aa29.22■■■□□ 2.27
KPNA1-210ENST00000494339 CEBPAP49715 358 aaPredicted RBP29.22■■■□□ 2.27
KPNA1-210ENST00000494339 HIRIP3Q9BW71 556 aaPredicted RBP29.22■■■□□ 2.27
KPNA1-210ENST00000494339 IFT172Q9UG01 1749 aa29.21■■■□□ 2.27
KPNA1-210ENST00000494339 MYO5BQ9ULV0 1848 aa29.21■■■□□ 2.27
KPNA1-210ENST00000494339 C3P01024 1663 aa29.21■■■□□ 2.27
KPNA1-210ENST00000494339 TMEM131LA2VDJ0 1609 aa29.19■■■□□ 2.26
KPNA1-210ENST00000494339 TRPM1Q7Z4N2 1603 aa29.19■■■□□ 2.26
KPNA1-210ENST00000494339 MADDQ8WXG6 1647 aa29.19■■■□□ 2.26
KPNA1-210ENST00000494339 PLPPR3Q6T4P5 718 aa29.18■■■□□ 2.26
KPNA1-210ENST00000494339 STAC3Q96MF2 364 aa29.18■■■□□ 2.26
KPNA1-210ENST00000494339 PPLO60437 1756 aa29.17■■■□□ 2.26
KPNA1-210ENST00000494339 TNRQ92752 1358 aa29.17■■■□□ 2.26
KPNA1-210ENST00000494339 MYOM2P54296 1465 aa29.15■■■□□ 2.26
KPNA1-210ENST00000494339 EIF4G2P78344 907 aaKnown RBP eCLIP29.15■■■□□ 2.26
KPNA1-210ENST00000494339 STAG3Q9UJ98 1225 aa29.15■■■□□ 2.26
KPNA1-210ENST00000494339 RIMS1Q86UR5 1692 aaKnown RBP29.15■■■□□ 2.26
KPNA1-210ENST00000494339 ROCK2O75116 1388 aaKnown RBP29.14■■■□□ 2.26
KPNA1-210ENST00000494339 HSPA5P11021 654 aaKnown RBP29.14■■■□□ 2.25
KPNA1-210ENST00000494339 RPGRIP1LQ68CZ1 1315 aa29.13■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms