RNA–Protein interactions for RNA: ENST00000494195.1

HMGB3P14-201, Transcript of high mobility group box 3 pseudogene 14, humanhuman

BASIC

Gene HMGB3P14, Length 599 nt, Biotype processed pseudogene.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P14-201ENST00000494195 PTPREP23469 700 aa16.95■□□□□ 0.3
HMGB3P14-201ENST00000494195 POTEGQ6S5H5 508 aa16.94■□□□□ 0.3
HMGB3P14-201ENST00000494195 GPIHBP1Q8IV16 184 aa16.94■□□□□ 0.3
HMGB3P14-201ENST00000494195 PBX2P40425 430 aa16.93■□□□□ 0.3
HMGB3P14-201ENST00000494195 POTEMA6NI47 508 aa16.92■□□□□ 0.3
HMGB3P14-201ENST00000494195 KCNH8Q96L42 1107 aa16.92■□□□□ 0.3
HMGB3P14-201ENST00000494195 CDHR5Q9HBB8 845 aa16.92■□□□□ 0.3
HMGB3P14-201ENST00000494195 KCNK17Q96T54 332 aa16.91■□□□□ 0.3
HMGB3P14-201ENST00000494195 ARHGAP33O14559 1287 aa16.9■□□□□ 0.3
HMGB3P14-201ENST00000494195 POTEEQ6S8J3 1075 aa16.9■□□□□ 0.3
HMGB3P14-201ENST00000494195 PPP1R3GB7ZBB8 358 aa16.87■□□□□ 0.29
HMGB3P14-201ENST00000494195 FCHSD2O94868 740 aa16.87■□□□□ 0.29
HMGB3P14-201ENST00000494195 CERKQ8TCT0 537 aa16.87■□□□□ 0.29
HMGB3P14-201ENST00000494195 PTGDRQ13258 359 aa16.86■□□□□ 0.29
HMGB3P14-201ENST00000494195 GPR37O15354 613 aa16.85■□□□□ 0.29
HMGB3P14-201ENST00000494195 COL9A1P20849 921 aa16.85■□□□□ 0.29
HMGB3P14-201ENST00000494195 PSEN2P49810 448 aa16.85■□□□□ 0.29
HMGB3P14-201ENST00000494195 NPDC1Q9NQX5 325 aaPredicted RBP16.85■□□□□ 0.29
HMGB3P14-201ENST00000494195 AXIN2Q9Y2T1 843 aa16.85■□□□□ 0.29
HMGB3P14-201ENST00000494195 ZC3H15Q8WU90 426 aaKnown RBP16.83■□□□□ 0.28
HMGB3P14-201ENST00000494195 HIC1Q14526 733 aa16.8■□□□□ 0.28
HMGB3P14-201ENST00000494195 DMRTA1Q5VZB9 504 aa16.78■□□□□ 0.28
HMGB3P14-201ENST00000494195 GNPATO15228 680 aa16.76■□□□□ 0.27
HMGB3P14-201ENST00000494195 PRSS12P56730 875 aa16.76■□□□□ 0.27
HMGB3P14-201ENST00000494195 CDAN1Q8IWY9 1227 aa16.76■□□□□ 0.27
HMGB3P14-201ENST00000494195 RBM27Q9P2N5 1060 aaKnown RBP16.76■□□□□ 0.27
HMGB3P14-201ENST00000494195 LSM11P83369 360 aaKnown RBP eCLIP16.75■□□□□ 0.27
HMGB3P14-201ENST00000494195 ZBED2Q9BTP6 218 aa16.75■□□□□ 0.27
HMGB3P14-201ENST00000494195 SLC4A5Q9BY07 1137 aa16.74■□□□□ 0.27
HMGB3P14-201ENST00000494195 ZMYND10O75800 440 aa16.73■□□□□ 0.27
HMGB3P14-201ENST00000494195 TPRNQ4KMQ1 711 aa16.73■□□□□ 0.27
HMGB3P14-201ENST00000494195 CDCA7LQ96GN5 454 aa16.73■□□□□ 0.27
HMGB3P14-201ENST00000494195 KRTAP3-3Q9BYR6 98 aa16.72■□□□□ 0.27
HMGB3P14-201ENST00000494195 KRTAP3-2Q9BYR7 98 aa16.72■□□□□ 0.27
HMGB3P14-201ENST00000494195 PADI6Q6TGC4 694 aa16.71■□□□□ 0.27
HMGB3P14-201ENST00000494195 TRIM6-TRIM34B2RNG4 842 aa16.7■□□□□ 0.26
HMGB3P14-201ENST00000494195 PROX2Q3B8N5 592 aa16.7■□□□□ 0.26
HMGB3P14-201ENST00000494195 BARGINQ6ZT62 677 aa16.7■□□□□ 0.26
HMGB3P14-201ENST00000494195 TK2O00142 265 aa16.69■□□□□ 0.26
HMGB3P14-201ENST00000494195 ONECUT3O60422 494 aaPredicted RBP16.69■□□□□ 0.26
HMGB3P14-201ENST00000494195 TTC13Q8NBP0 860 aa16.69■□□□□ 0.26
HMGB3P14-201ENST00000494195 VPS9D1Q9Y2B5 631 aa16.68■□□□□ 0.26
HMGB3P14-201ENST00000494195 FECHP22830 423 aa16.67■□□□□ 0.26
HMGB3P14-201ENST00000494195 TSKSQ9UJT2 592 aa16.67■□□□□ 0.26
HMGB3P14-201ENST00000494195 ANKRD13DQ6ZTN6 518 aa16.65■□□□□ 0.26
HMGB3P14-201ENST00000494195 FAM198AQ9UFP1 575 aa16.65■□□□□ 0.26
HMGB3P14-201ENST00000494195 ADGRD1Q6QNK2 874 aa16.64■□□□□ 0.25
HMGB3P14-201ENST00000494195 PACS2Q86VP3 889 aa16.64■□□□□ 0.25
HMGB3P14-201ENST00000494195 PCDH10Q9P2E7 1040 aa16.64■□□□□ 0.25
HMGB3P14-201ENST00000494195 MAP2K5Q13163 448 aa16.63■□□□□ 0.25
HMGB3P14-201ENST00000494195 RABGEF1Q9UJ41 708 aa16.63■□□□□ 0.25
HMGB3P14-201ENST00000494195 KRI1Q8N9T8 703 aaKnown RBP16.61■□□□□ 0.25
HMGB3P14-201ENST00000494195 KIAA1468Q9P260 1216 aa16.61■□□□□ 0.25
HMGB3P14-201ENST00000494195 MINK1Q8N4C8 1332 aaPredicted RBP16.61■□□□□ 0.25
HMGB3P14-201ENST00000494195 NBPF26B4DH59 902 aa16.58■□□□□ 0.24
HMGB3P14-201ENST00000494195 IRF6O14896 467 aa16.57■□□□□ 0.24
HMGB3P14-201ENST00000494195 PRKCSHP14314 528 aaPredicted RBP16.57■□□□□ 0.24
HMGB3P14-201ENST00000494195 ADGRG1Q9Y653 693 aa16.57■□□□□ 0.24
HMGB3P14-201ENST00000494195 HRO43593 1189 aa16.55■□□□□ 0.24
HMGB3P14-201ENST00000494195 TATDN2Q93075 761 aa16.55■□□□□ 0.24
HMGB3P14-201ENST00000494195 NBPF3Q9H094 633 aa16.55■□□□□ 0.24
HMGB3P14-201ENST00000494195 BHMG1C9JSJ3 638 aaPredicted RBP16.54■□□□□ 0.24
HMGB3P14-201ENST00000494195 PNMA3Q9UL41 463 aa16.54■□□□□ 0.24
HMGB3P14-201ENST00000494195 OATP04181 439 aa16.53■□□□□ 0.24
HMGB3P14-201ENST00000494195 NUDT18Q6ZVK8 323 aa16.53■□□□□ 0.24
HMGB3P14-201ENST00000494195 CCDC102AQ96A19 550 aa16.53■□□□□ 0.24
HMGB3P14-201ENST00000494195 SLC24A3Q9HC58 644 aa16.53■□□□□ 0.24
HMGB3P14-201ENST00000494195 C3orf80F5H4A9 247 aa16.52■□□□□ 0.24
HMGB3P14-201ENST00000494195 FAM161AQ3B820 660 aa16.52■□□□□ 0.24
HMGB3P14-201ENST00000494195 RBM46Q8TBY0 533 aaKnown RBP16.52■□□□□ 0.24
HMGB3P14-201ENST00000494195 SMAPO00193 183 aa16.49■□□□□ 0.23
HMGB3P14-201ENST00000494195 AK7Q96M32 723 aa16.49■□□□□ 0.23
HMGB3P14-201ENST00000494195 EYA1Q99502 592 aa16.49■□□□□ 0.23
HMGB3P14-201ENST00000494195 METTL3Q86U44 580 aaKnown RBP16.48■□□□□ 0.23
HMGB3P14-201ENST00000494195 LAPTM4BQ86VI4 370 aa16.48■□□□□ 0.23
HMGB3P14-201ENST00000494195 MRPL50Q8N5N7 158 aaKnown RBP16.48■□□□□ 0.23
HMGB3P14-201ENST00000494195 PXYLP1Q8TE99 480 aa16.48■□□□□ 0.23
HMGB3P14-201ENST00000494195 STAC3Q96MF2 364 aa16.48■□□□□ 0.23
HMGB3P14-201ENST00000494195 SEPT9Q9UHD8 586 aaPredicted RBP16.48■□□□□ 0.23
HMGB3P14-201ENST00000494195 FAM98CQ17RN3 349 aaKnown RBP16.45■□□□□ 0.22
HMGB3P14-201ENST00000494195 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.4■□□□□ 0.22
HMGB3P14-201ENST00000494195 RCCD1A6NED2 376 aa16.4■□□□□ 0.22
HMGB3P14-201ENST00000494195 TRIM66O15016 1216 aa16.4■□□□□ 0.22
HMGB3P14-201ENST00000494195 PHOX2BQ99453 314 aa16.4■□□□□ 0.22
HMGB3P14-201ENST00000494195 DNAJB2P25686 324 aa16.39■□□□□ 0.21
HMGB3P14-201ENST00000494195 ZFRQ96KR1 1074 aaKnown RBP16.37■□□□□ 0.21
HMGB3P14-201ENST00000494195 GOLGA8CPA6NN73 597 aa16.36■□□□□ 0.21
HMGB3P14-201ENST00000494195 AMHR2Q16671 573 aa16.35■□□□□ 0.21
HMGB3P14-201ENST00000494195 TMEM134Q9H6X4 195 aa16.34■□□□□ 0.21
HMGB3P14-201ENST00000494195 SPNS2Q8IVW8 549 aa16.33■□□□□ 0.2
HMGB3P14-201ENST00000494195 HDGFP51858 240 aaKnown RBP16.31■□□□□ 0.2
HMGB3P14-201ENST00000494195 NLRP7Q8WX94 980 aa16.31■□□□□ 0.2
HMGB3P14-201ENST00000494195 MDM2Q00987 491 aaPredicted RBP16.3■□□□□ 0.2
HMGB3P14-201ENST00000494195 PDE4DQ08499 809 aa16.3■□□□□ 0.2
HMGB3P14-201ENST00000494195 SAMD7Q7Z3H4 446 aa16.3■□□□□ 0.2
HMGB3P14-201ENST00000494195 ANKK1Q8NFD2 765 aa16.3■□□□□ 0.2
HMGB3P14-201ENST00000494195 MYT1LQ9UL68 1186 aa16.3■□□□□ 0.2
HMGB3P14-201ENST00000494195 SWT1Q5T5J6 900 aaKnown RBP16.29■□□□□ 0.2
HMGB3P14-201ENST00000494195 WNT2BQ93097 391 aa16.29■□□□□ 0.2
HMGB3P14-201ENST00000494195 CLCN1P35523 988 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms