RNA–Protein interactions for RNA: ENST00000493957.5

UBA3-211, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 3

Gene UBA3, Length 581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-211ENST00000493957 A2MP01023 1474 aa18.07■□□□□ 0.48
UBA3-211ENST00000493957 RTEL1-TNFRSF6BF6WH68 1400 aa18.07■□□□□ 0.48
UBA3-211ENST00000493957 ABCC5O15440 1437 aa18.06■□□□□ 0.48
UBA3-211ENST00000493957 DAPK1P53355 1430 aa18.05■□□□□ 0.48
UBA3-211ENST00000493957 PTPRMP28827 1452 aa18.03■□□□□ 0.48
UBA3-211ENST00000493957 RSPH4AQ5TD94 716 aa18.03■□□□□ 0.48
UBA3-211ENST00000493957 SHANK2Q9UPX8 1470 aa18.02■□□□□ 0.48
UBA3-211ENST00000493957 FAM50AQ14320 339 aaKnown RBP18.01■□□□□ 0.47
UBA3-211ENST00000493957 TSPY4P0CV99 314 aa18■□□□□ 0.47
UBA3-211ENST00000493957 TSPY10P0CW01 314 aa18■□□□□ 0.47
UBA3-211ENST00000493957 CLTCQ00610 1675 aaKnown RBP17.99■□□□□ 0.47
UBA3-211ENST00000493957 C3P01024 1663 aa17.99■□□□□ 0.47
UBA3-211ENST00000493957 DHX29Q7Z478 1369 aaKnown RBP17.98■□□□□ 0.47
UBA3-211ENST00000493957 CHIC2Q9UKJ5 165 aa17.96■□□□□ 0.47
UBA3-211ENST00000493957 PTPRKQ15262 1439 aa17.96■□□□□ 0.47
UBA3-211ENST00000493957 EIF2AK4Q9P2K8 1649 aaKnown RBP17.95■□□□□ 0.46
UBA3-211ENST00000493957 RNF17Q9BXT8 1623 aaKnown RBP17.94■□□□□ 0.46
UBA3-211ENST00000493957 MROH2AA6NES4 1674 aa17.94■□□□□ 0.46
UBA3-211ENST00000493957 DUOX2Q9NRD8 1548 aa17.93■□□□□ 0.46
UBA3-211ENST00000493957 MROH1Q8NDA8 1641 aa17.93■□□□□ 0.46
UBA3-211ENST00000493957 KIF15Q9NS87 1388 aa17.92■□□□□ 0.46
UBA3-211ENST00000493957 RRBP1Q9P2E9 1410 aaKnown RBP17.92■□□□□ 0.46
UBA3-211ENST00000493957 ADGRL2O95490 1459 aa17.92■□□□□ 0.46
UBA3-211ENST00000493957 CEP152O94986 1710 aa17.92■□□□□ 0.46
UBA3-211ENST00000493957 KIF3BO15066 747 aa17.91■□□□□ 0.46
UBA3-211ENST00000493957 GGT6Q6P531 493 aa17.91■□□□□ 0.46
UBA3-211ENST00000493957 RRP7BPQ9NSQ0 103 aa17.91■□□□□ 0.46
UBA3-211ENST00000493957 CEBPAP49715 358 aaPredicted RBP17.9■□□□□ 0.46
UBA3-211ENST00000493957 NCOA1Q15788 1441 aa17.89■□□□□ 0.46
UBA3-211ENST00000493957 ANKRD30AQ9BXX3 1397 aa17.89■□□□□ 0.45
UBA3-211ENST00000493957 ITGAEP38570 1179 aa17.88■□□□□ 0.45
UBA3-211ENST00000493957 CFAP65Q6ZU64 1925 aaKnown RBP17.88■□□□□ 0.45
UBA3-211ENST00000493957 DEPDC5O75140 1603 aa17.87■□□□□ 0.45
UBA3-211ENST00000493957 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.87■□□□□ 0.45
UBA3-211ENST00000493957 ERBINQ96RT1 1412 aa17.86■□□□□ 0.45
UBA3-211ENST00000493957 SETD1BQ9UPS6 1966 aaKnown RBP17.86■□□□□ 0.45
UBA3-211ENST00000493957 PREX1Q8TCU6 1659 aa17.85■□□□□ 0.45
UBA3-211ENST00000493957 KDM5DQ9BY66 1539 aa17.85■□□□□ 0.45
UBA3-211ENST00000493957 CNTLNQ9NXG0 1405 aa17.85■□□□□ 0.45
UBA3-211ENST00000493957 ZC3H13Q5T200 1668 aaKnown RBP17.84■□□□□ 0.45
UBA3-211ENST00000493957 PRDM15P57071 1507 aaPredicted RBP17.83■□□□□ 0.45
UBA3-211ENST00000493957 ESF1Q9H501 851 aaKnown RBP17.83■□□□□ 0.44
UBA3-211ENST00000493957 ABCC3O15438 1527 aa17.82■□□□□ 0.44
UBA3-211ENST00000493957 CAMSAP1Q5T5Y3 1602 aa17.82■□□□□ 0.44
UBA3-211ENST00000493957 LMTK3Q96Q04 1460 aa17.82■□□□□ 0.44
UBA3-211ENST00000493957 ZMYM3Q14202 1370 aa17.81■□□□□ 0.44
UBA3-211ENST00000493957 FAM135AQ9P2D6 1515 aa17.81■□□□□ 0.44
UBA3-211ENST00000493957 GCC2Q8IWJ2 1684 aa17.8■□□□□ 0.44
UBA3-211ENST00000493957 ROCK1Q13464 1354 aa17.79■□□□□ 0.44
UBA3-211ENST00000493957 ANKRD50Q9ULJ7 1429 aa17.78■□□□□ 0.44
UBA3-211ENST00000493957 MYO3AQ8NEV4 1616 aa17.77■□□□□ 0.44
UBA3-211ENST00000493957 UNC13BO14795 1591 aa17.77■□□□□ 0.44
UBA3-211ENST00000493957 VWDEQ8N2E2 1590 aa17.77■□□□□ 0.44
UBA3-211ENST00000493957 WASHC2CQ9Y4E1 1318 aa17.76■□□□□ 0.43
UBA3-211ENST00000493957 PZPP20742 1482 aa17.75■□□□□ 0.43
UBA3-211ENST00000493957 ABCB7O75027 752 aa17.74■□□□□ 0.43
UBA3-211ENST00000493957 ZNF142P52746 1687 aaPredicted RBP17.74■□□□□ 0.43
UBA3-211ENST00000493957 FBXO31Q5XUX0 539 aaPredicted RBP17.73■□□□□ 0.43
UBA3-211ENST00000493957 NPATQ14207 1427 aa17.72■□□□□ 0.43
UBA3-211ENST00000493957 HSPA2P54652 639 aa17.72■□□□□ 0.43
UBA3-211ENST00000493957 NAIPQ13075 1403 aa17.71■□□□□ 0.43
UBA3-211ENST00000493957 UHRF1BP1Q6BDS2 1440 aa17.71■□□□□ 0.43
UBA3-211ENST00000493957 IQGAP3Q86VI3 1631 aa17.69■□□□□ 0.42
UBA3-211ENST00000493957 LMTK2Q8IWU2 1503 aa17.69■□□□□ 0.42
UBA3-211ENST00000493957 TET3O43151 1660 aa17.69■□□□□ 0.42
UBA3-211ENST00000493957 SPATA31D1Q6ZQQ2 1576 aa17.69■□□□□ 0.42
UBA3-211ENST00000493957 STRCQ7RTU9 1775 aa17.68■□□□□ 0.42
UBA3-211ENST00000493957 EFCAB6Q5THR3 1501 aa17.68■□□□□ 0.42
UBA3-211ENST00000493957 CEP170BQ9Y4F5 1589 aaPredicted RBP17.68■□□□□ 0.42
UBA3-211ENST00000493957 ERVK-7P63135 1459 aa17.68■□□□□ 0.42
UBA3-211ENST00000493957 KANK1Q14678 1352 aa17.67■□□□□ 0.42
UBA3-211ENST00000493957 ZNF219Q9P2Y4 722 aaPredicted RBP17.67■□□□□ 0.42
UBA3-211ENST00000493957 E9PCH4 1651 aa17.67■□□□□ 0.42
UBA3-211ENST00000493957 HFM1A2PYH4 1435 aa17.66■□□□□ 0.42
UBA3-211ENST00000493957 TNRQ92752 1358 aa17.66■□□□□ 0.42
UBA3-211ENST00000493957 ARHGAP31Q2M1Z3 1444 aa17.64■□□□□ 0.42
UBA3-211ENST00000493957 SYNMO15061 1565 aa17.63■□□□□ 0.41
UBA3-211ENST00000493957 SLC4A2P04920 1241 aa17.63■□□□□ 0.41
UBA3-211ENST00000493957 A2ML1A8K2U0 1454 aa17.62■□□□□ 0.41
UBA3-211ENST00000493957 MYO5BQ9ULV0 1848 aa17.61■□□□□ 0.41
UBA3-211ENST00000493957 UBR1Q8IWV7 1749 aa17.6■□□□□ 0.41
UBA3-211ENST00000493957 PIK3C2BO00750 1634 aa17.59■□□□□ 0.41
UBA3-211ENST00000493957 NUP155O75694 1391 aa17.59■□□□□ 0.41
UBA3-211ENST00000493957 POLR1AO95602 1720 aaPredicted RBP17.58■□□□□ 0.41
UBA3-211ENST00000493957 NLRP1Q9C000 1473 aa17.57■□□□□ 0.4
UBA3-211ENST00000493957 NOS1P29475 1434 aa17.56■□□□□ 0.4
UBA3-211ENST00000493957 SPHKAPQ2M3C7 1700 aa17.56■□□□□ 0.4
UBA3-211ENST00000493957 UGGT1Q9NYU2 1555 aa17.56■□□□□ 0.4
UBA3-211ENST00000493957 RPRD2Q5VT52 1461 aaKnown RBP17.55■□□□□ 0.4
UBA3-211ENST00000493957 PLA2R1Q13018 1463 aa17.51■□□□□ 0.39
UBA3-211ENST00000493957 NEURL4Q96JN8 1562 aa17.51■□□□□ 0.39
UBA3-211ENST00000493957 SETD5Q9C0A6 1442 aa17.5■□□□□ 0.39
UBA3-211ENST00000493957 TRIM52Q96A61 297 aa17.5■□□□□ 0.39
UBA3-211ENST00000493957 KDM5AP29375 1690 aaKnown RBP17.5■□□□□ 0.39
UBA3-211ENST00000493957 NCKAP5LQ9HCH0 1330 aa17.49■□□□□ 0.39
UBA3-211ENST00000493957 ADGRB3O60242 1522 aa17.48■□□□□ 0.39
UBA3-211ENST00000493957 IDI1Q13907 227 aa17.47■□□□□ 0.39
UBA3-211ENST00000493957 RAB3GAP2Q9H2M9 1393 aa17.47■□□□□ 0.39
UBA3-211ENST00000493957 TMEM131LA2VDJ0 1609 aa17.47■□□□□ 0.39
UBA3-211ENST00000493957 CLTCL1P53675 1640 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms