RNA–Protein interactions for RNA: ENST00000493615.5

NECTIN3-211, Transcript of nectin cell adhesion molecule 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NECTIN3, Length 1,876 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3-211ENST00000493615 ARHGEF40Q8TER5 1519 aa27.59■■■□□ 2.01
NECTIN3-211ENST00000493615 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.59■■■□□ 2.01
NECTIN3-211ENST00000493615 DIP2CQ9Y2E4 1556 aa27.58■■■□□ 2.01
NECTIN3-211ENST00000493615 KDM5DQ9BY66 1539 aa27.57■■■□□ 2
NECTIN3-211ENST00000493615 A2MP01023 1474 aa27.57■■■□□ 2
NECTIN3-211ENST00000493615 UNC13BO14795 1591 aa27.56■■■□□ 2
NECTIN3-211ENST00000493615 ATP10AO60312 1499 aa27.56■■■□□ 2
NECTIN3-211ENST00000493615 KIF3BO15066 747 aa27.55■■■□□ 2
NECTIN3-211ENST00000493615 PKD2Q13563 968 aa27.53■■■□□ 2
NECTIN3-211ENST00000493615 NEUROD1Q13562 356 aa27.53■■■□□ 2
NECTIN3-211ENST00000493615 FAM135AQ9P2D6 1515 aa27.51■■□□□ 1.99
NECTIN3-211ENST00000493615 ARID4BQ4LE39 1312 aaPredicted RBP27.5■■□□□ 1.99
NECTIN3-211ENST00000493615 SIGLEC1Q9BZZ2 1709 aa27.49■■□□□ 1.99
NECTIN3-211ENST00000493615 ANKRD30BQ9BXX2 1392 aa27.49■■□□□ 1.99
NECTIN3-211ENST00000493615 EIF2AK4Q9P2K8 1649 aaKnown RBP27.47■■□□□ 1.99
NECTIN3-211ENST00000493615 DEPDC5O75140 1603 aa27.45■■□□□ 1.98
NECTIN3-211ENST00000493615 IQGAP3Q86VI3 1631 aa27.45■■□□□ 1.98
NECTIN3-211ENST00000493615 MROH1Q8NDA8 1641 aa27.42■■□□□ 1.98
NECTIN3-211ENST00000493615 MLECQ14165 292 aa27.42■■□□□ 1.98
NECTIN3-211ENST00000493615 REREQ9P2R6 1566 aa27.41■■□□□ 1.98
NECTIN3-211ENST00000493615 PRDM15P57071 1507 aaPredicted RBP27.39■■□□□ 1.97
NECTIN3-211ENST00000493615 GGT6Q6P531 493 aa27.38■■□□□ 1.97
NECTIN3-211ENST00000493615 VWDEQ8N2E2 1590 aa27.38■■□□□ 1.97
NECTIN3-211ENST00000493615 KANK1Q14678 1352 aa27.37■■□□□ 1.97
NECTIN3-211ENST00000493615 RNF17Q9BXT8 1623 aaKnown RBP27.37■■□□□ 1.97
NECTIN3-211ENST00000493615 BCORL1Q5H9F3 1711 aa27.36■■□□□ 1.97
NECTIN3-211ENST00000493615 AGLP35573 1532 aa27.34■■□□□ 1.97
NECTIN3-211ENST00000493615 TIMELESSQ9UNS1 1208 aa27.32■■□□□ 1.96
NECTIN3-211ENST00000493615 PLA2R1Q13018 1463 aa27.3■■□□□ 1.96
NECTIN3-211ENST00000493615 RPRD2Q5VT52 1461 aaKnown RBP27.3■■□□□ 1.96
NECTIN3-211ENST00000493615 TONSLQ96HA7 1378 aa27.28■■□□□ 1.96
NECTIN3-211ENST00000493615 TET3O43151 1660 aa27.26■■□□□ 1.95
NECTIN3-211ENST00000493615 E9PCH4 1651 aa27.25■■□□□ 1.95
NECTIN3-211ENST00000493615 LMTK2Q8IWU2 1503 aa27.25■■□□□ 1.95
NECTIN3-211ENST00000493615 WASHC2CQ9Y4E1 1318 aa27.25■■□□□ 1.95
NECTIN3-211ENST00000493615 ABCC3O15438 1527 aa27.22■■□□□ 1.95
NECTIN3-211ENST00000493615 CEP152O94986 1710 aa27.22■■□□□ 1.95
NECTIN3-211ENST00000493615 PPP1R15AO75807 674 aaPredicted RBP27.21■■□□□ 1.95
NECTIN3-211ENST00000493615 L3MBTL2Q969R5 705 aa27.21■■□□□ 1.95
NECTIN3-211ENST00000493615 EFCAB6Q5THR3 1501 aa27.2■■□□□ 1.95
NECTIN3-211ENST00000493615 KDM4FA0A1W2PPD8 638 aa27.2■■□□□ 1.94
NECTIN3-211ENST00000493615 ADAMTSL3P82987 1691 aa27.19■■□□□ 1.94
NECTIN3-211ENST00000493615 ESF1Q9H501 851 aaKnown RBP27.18■■□□□ 1.94
NECTIN3-211ENST00000493615 MADDQ8WXG6 1647 aa27.17■■□□□ 1.94
NECTIN3-211ENST00000493615 CCDC144AA2RUR9 1427 aa27.17■■□□□ 1.94
NECTIN3-211ENST00000493615 PTPRTO14522 1441 aa27.17■■□□□ 1.94
NECTIN3-211ENST00000493615 FER1L4A9Z1Z3 1794 aa27.17■■□□□ 1.94
NECTIN3-211ENST00000493615 NPATQ14207 1427 aa27.15■■□□□ 1.94
NECTIN3-211ENST00000493615 PLPPR3Q6T4P5 718 aa27.13■■□□□ 1.93
NECTIN3-211ENST00000493615 CLTCQ00610 1675 aaKnown RBP27.13■■□□□ 1.93
NECTIN3-211ENST00000493615 PPP6R1Q9UPN7 881 aa27.13■■□□□ 1.93
NECTIN3-211ENST00000493615 RIMS1Q86UR5 1692 aaKnown RBP27.12■■□□□ 1.93
NECTIN3-211ENST00000493615 TRPM2O94759 1503 aa27.11■■□□□ 1.93
NECTIN3-211ENST00000493615 CAMSAP1Q5T5Y3 1602 aa27.1■■□□□ 1.93
NECTIN3-211ENST00000493615 SPHKAPQ2M3C7 1700 aa27.09■■□□□ 1.93
NECTIN3-211ENST00000493615 ZC3H13Q5T200 1668 aaKnown RBP27.08■■□□□ 1.93
NECTIN3-211ENST00000493615 ARHGAP31Q2M1Z3 1444 aa27.07■■□□□ 1.92
NECTIN3-211ENST00000493615 CEBPAP49715 358 aaPredicted RBP27.06■■□□□ 1.92
NECTIN3-211ENST00000493615 CNTLNQ9NXG0 1405 aa27.04■■□□□ 1.92
NECTIN3-211ENST00000493615 ZMYM3Q14202 1370 aa27.04■■□□□ 1.92
NECTIN3-211ENST00000493615 RGL3Q3MIN7 710 aa27.04■■□□□ 1.92
NECTIN3-211ENST00000493615 UGGT1Q9NYU2 1555 aa27.03■■□□□ 1.92
NECTIN3-211ENST00000493615 CLTCL1P53675 1640 aa27.03■■□□□ 1.92
NECTIN3-211ENST00000493615 CFAP65Q6ZU64 1925 aaKnown RBP27.02■■□□□ 1.92
NECTIN3-211ENST00000493615 NBPF8Q3BBV2 869 aa27.01■■□□□ 1.91
NECTIN3-211ENST00000493615 PTPRMP28827 1452 aa27.01■■□□□ 1.91
NECTIN3-211ENST00000493615 NOS1P29475 1434 aa27.01■■□□□ 1.91
NECTIN3-211ENST00000493615 SPATA31E1Q6ZUB1 1445 aa27■■□□□ 1.91
NECTIN3-211ENST00000493615 MROH2AA6NES4 1674 aa26.99■■□□□ 1.91
NECTIN3-211ENST00000493615 C3P01024 1663 aa26.99■■□□□ 1.91
NECTIN3-211ENST00000493615 FBXO31Q5XUX0 539 aaPredicted RBP26.99■■□□□ 1.91
NECTIN3-211ENST00000493615 DCAF11Q8TEB1 546 aa26.98■■□□□ 1.91
NECTIN3-211ENST00000493615 KDM2AQ9Y2K7 1162 aa26.96■■□□□ 1.91
NECTIN3-211ENST00000493615 SYNMO15061 1565 aa26.93■■□□□ 1.9
NECTIN3-211ENST00000493615 ZNF326Q5BKZ1 582 aaKnown RBP26.91■■□□□ 1.9
NECTIN3-211ENST00000493615 ZNF316A6NFI3 1004 aaPredicted RBP26.9■■□□□ 1.9
NECTIN3-211ENST00000493615 ERVK-7P63135 1459 aa26.9■■□□□ 1.9
NECTIN3-211ENST00000493615 PREX1Q8TCU6 1659 aa26.9■■□□□ 1.9
NECTIN3-211ENST00000493615 UHRF1BP1Q6BDS2 1440 aa26.89■■□□□ 1.89
NECTIN3-211ENST00000493615 IDI1Q13907 227 aa26.88■■□□□ 1.89
NECTIN3-211ENST00000493615 CHGAP10645 457 aaKnown RBP26.86■■□□□ 1.89
NECTIN3-211ENST00000493615 PIK3C2BO00750 1634 aa26.86■■□□□ 1.89
NECTIN3-211ENST00000493615 SLC52A1Q9NWF4 448 aa26.85■■□□□ 1.89
NECTIN3-211ENST00000493615 NEURL4Q96JN8 1562 aa26.84■■□□□ 1.89
NECTIN3-211ENST00000493615 ADGRB3O60242 1522 aa26.82■■□□□ 1.88
NECTIN3-211ENST00000493615 KIF1BO60333 1816 aa26.82■■□□□ 1.88
NECTIN3-211ENST00000493615 SPATA31D1Q6ZQQ2 1576 aa26.82■■□□□ 1.88
NECTIN3-211ENST00000493615 PRAG1Q86YV5 1406 aa26.82■■□□□ 1.88
NECTIN3-211ENST00000493615 AEBP2Q6ZN18 517 aaPredicted RBP26.8■■□□□ 1.88
NECTIN3-211ENST00000493615 TNRQ92752 1358 aa26.79■■□□□ 1.88
NECTIN3-211ENST00000493615 HIRIP3Q9BW71 556 aaPredicted RBP26.78■■□□□ 1.88
NECTIN3-211ENST00000493615 SETD1BQ9UPS6 1966 aaKnown RBP26.78■■□□□ 1.88
NECTIN3-211ENST00000493615 RALGAPBQ86X10 1494 aa26.74■■□□□ 1.87
NECTIN3-211ENST00000493615 STAC3Q96MF2 364 aa26.74■■□□□ 1.87
NECTIN3-211ENST00000493615 NBPF1Q3BBV0 1214 aa26.71■■□□□ 1.87
NECTIN3-211ENST00000493615 ADGRF5Q8IZF2 1346 aa26.71■■□□□ 1.87
NECTIN3-211ENST00000493615 TMEM131LA2VDJ0 1609 aa26.7■■□□□ 1.87
NECTIN3-211ENST00000493615 HSPA5P11021 654 aaKnown RBP26.7■■□□□ 1.87
NECTIN3-211ENST00000493615 RPGRIP1LQ68CZ1 1315 aa26.7■■□□□ 1.86
NECTIN3-211ENST00000493615 MYO3AQ8NEV4 1616 aa26.69■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms