RNA–Protein interactions for RNA: ENST00000492973.1

TPR-208, Transcript of translocated promoter region, nuclear basket protein, humanhuman

TSL 2

Gene TPR, Length 453 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPR-208ENST00000492973 PRIM1P49642 420 aaKnown RBP12.56□□□□□ -0.4
TPR-208ENST00000492973 ZNF687Q8N1G0 1237 aa12.56□□□□□ -0.4
TPR-208ENST00000492973 BCANQ96GW7 911 aa12.55□□□□□ -0.4
TPR-208ENST00000492973 ADAM33Q9BZ11 813 aa12.55□□□□□ -0.4
TPR-208ENST00000492973 EN1Q05925 392 aaPredicted RBP12.54□□□□□ -0.4
TPR-208ENST00000492973 BCL2L12Q9HB09 334 aa12.54□□□□□ -0.4
TPR-208ENST00000492973 SMYD5Q6GMV2 418 aa12.52□□□□□ -0.41
TPR-208ENST00000492973 POTEEQ6S8J3 1075 aa12.52□□□□□ -0.41
TPR-208ENST00000492973 CC2D2AQ9P2K1 1620 aa12.51□□□□□ -0.41
TPR-208ENST00000492973 RBM33Q96EV2 1170 aaKnown RBP12.5□□□□□ -0.41
TPR-208ENST00000492973 BAZ1AQ9NRL2 1556 aaPredicted RBP12.5□□□□□ -0.41
TPR-208ENST00000492973 MROH2BQ7Z745 1585 aa12.49□□□□□ -0.41
TPR-208ENST00000492973 PBX2P40425 430 aa12.49□□□□□ -0.41
TPR-208ENST00000492973 SMARCA4P51532 1647 aa12.48□□□□□ -0.41
TPR-208ENST00000492973 MAP3K7O43318 606 aa12.48□□□□□ -0.41
TPR-208ENST00000492973 C6orf132Q5T0Z8 1188 aa12.47□□□□□ -0.41
TPR-208ENST00000492973 ARHGAP33O14559 1287 aa12.46□□□□□ -0.41
TPR-208ENST00000492973 PTPREP23469 700 aa12.46□□□□□ -0.41
TPR-208ENST00000492973 TSR1Q2NL82 804 aaKnown RBP12.46□□□□□ -0.41
TPR-208ENST00000492973 RBM26Q5T8P6 1007 aaKnown RBP12.46□□□□□ -0.41
TPR-208ENST00000492973 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.45□□□□□ -0.42
TPR-208ENST00000492973 CDAN1Q8IWY9 1227 aa12.45□□□□□ -0.42
TPR-208ENST00000492973 KCNK17Q96T54 332 aa12.45□□□□□ -0.42
TPR-208ENST00000492973 AXIN2Q9Y2T1 843 aa12.45□□□□□ -0.42
TPR-208ENST00000492973 TULP1O00294 542 aaPredicted RBP12.44□□□□□ -0.42
TPR-208ENST00000492973 KRTAP3-3Q9BYR6 98 aa12.44□□□□□ -0.42
TPR-208ENST00000492973 KRTAP3-2Q9BYR7 98 aa12.44□□□□□ -0.42
TPR-208ENST00000492973 ATAD2BQ9ULI0 1458 aa12.44□□□□□ -0.42
TPR-208ENST00000492973 PSEN2P49810 448 aa12.43□□□□□ -0.42
TPR-208ENST00000492973 CDHR5Q9HBB8 845 aa12.43□□□□□ -0.42
TPR-208ENST00000492973 RSF1Q96T23 1441 aaPredicted RBP12.42□□□□□ -0.42
TPR-208ENST00000492973 PPP1R3GB7ZBB8 358 aa12.41□□□□□ -0.42
TPR-208ENST00000492973 COL9A1P20849 921 aa12.41□□□□□ -0.42
TPR-208ENST00000492973 NCAPD3P42695 1498 aa12.4□□□□□ -0.42
TPR-208ENST00000492973 DMRTA1Q5VZB9 504 aa12.4□□□□□ -0.42
TPR-208ENST00000492973 KCNH8Q96L42 1107 aa12.4□□□□□ -0.42
TPR-208ENST00000492973 LMOD2Q6P5Q4 547 aa12.39□□□□□ -0.43
TPR-208ENST00000492973 NPDC1Q9NQX5 325 aaPredicted RBP12.39□□□□□ -0.43
TPR-208ENST00000492973 NUTM2FA1L443 756 aa12.38□□□□□ -0.43
TPR-208ENST00000492973 LSM11P83369 360 aaKnown RBP eCLIP12.38□□□□□ -0.43
TPR-208ENST00000492973 PCDH10Q9P2E7 1040 aa12.38□□□□□ -0.43
TPR-208ENST00000492973 SMARCA2P51531 1590 aa12.38□□□□□ -0.43
TPR-208ENST00000492973 PEG3Q9GZU2 1588 aa12.38□□□□□ -0.43
TPR-208ENST00000492973 GPR37O15354 613 aa12.36□□□□□ -0.43
TPR-208ENST00000492973 PTGDRQ13258 359 aa12.36□□□□□ -0.43
TPR-208ENST00000492973 CERKQ8TCT0 537 aa12.36□□□□□ -0.43
TPR-208ENST00000492973 ZBED2Q9BTP6 218 aa12.36□□□□□ -0.43
TPR-208ENST00000492973 GPIHBP1Q8IV16 184 aa12.35□□□□□ -0.43
TPR-208ENST00000492973 SLC4A5Q9BY07 1137 aa12.35□□□□□ -0.43
TPR-208ENST00000492973 TK2O00142 265 aa12.32□□□□□ -0.44
TPR-208ENST00000492973 FCHSD2O94868 740 aa12.32□□□□□ -0.44
TPR-208ENST00000492973 HMGXB3Q12766 1538 aa12.32□□□□□ -0.44
TPR-208ENST00000492973 BAZ1BQ9UIG0 1483 aaKnown RBP12.31□□□□□ -0.44
TPR-208ENST00000492973 WIZO95785 1651 aa12.3□□□□□ -0.44
TPR-208ENST00000492973 PRSS12P56730 875 aa12.3□□□□□ -0.44
TPR-208ENST00000492973 PROX2Q3B8N5 592 aa12.3□□□□□ -0.44
TPR-208ENST00000492973 RBM27Q9P2N5 1060 aaKnown RBP12.3□□□□□ -0.44
TPR-208ENST00000492973 VPS9D1Q9Y2B5 631 aa12.3□□□□□ -0.44
TPR-208ENST00000492973 ADGRD1Q6QNK2 874 aa12.29□□□□□ -0.44
TPR-208ENST00000492973 CDCA7LQ96GN5 454 aa12.29□□□□□ -0.44
TPR-208ENST00000492973 TRIM6-TRIM34B2RNG4 842 aa12.28□□□□□ -0.44
TPR-208ENST00000492973 ONECUT3O60422 494 aaPredicted RBP12.28□□□□□ -0.44
TPR-208ENST00000492973 HIC1Q14526 733 aa12.28□□□□□ -0.44
TPR-208ENST00000492973 ANKRD13DQ6ZTN6 518 aa12.28□□□□□ -0.44
TPR-208ENST00000492973 TTC13Q8NBP0 860 aa12.28□□□□□ -0.44
TPR-208ENST00000492973 TSKSQ9UJT2 592 aa12.27□□□□□ -0.45
TPR-208ENST00000492973 FAM198AQ9UFP1 575 aa12.26□□□□□ -0.45
TPR-208ENST00000492973 GNPATO15228 680 aa12.25□□□□□ -0.45
TPR-208ENST00000492973 PADI6Q6TGC4 694 aa12.25□□□□□ -0.45
TPR-208ENST00000492973 ZC3H15Q8WU90 426 aaKnown RBP12.25□□□□□ -0.45
TPR-208ENST00000492973 HRO43593 1189 aa12.24□□□□□ -0.45
TPR-208ENST00000492973 RABGEF1Q9UJ41 708 aa12.24□□□□□ -0.45
TPR-208ENST00000492973 BHMG1C9JSJ3 638 aaPredicted RBP12.22□□□□□ -0.45
TPR-208ENST00000492973 SUPT5HO00267 1087 aaKnown RBP12.22□□□□□ -0.45
TPR-208ENST00000492973 FECHP22830 423 aa12.22□□□□□ -0.45
TPR-208ENST00000492973 KIAA1468Q9P260 1216 aa12.22□□□□□ -0.45
TPR-208ENST00000492973 TOP2AP11388 1531 aaKnown RBP12.21□□□□□ -0.46
TPR-208ENST00000492973 ZMYND10O75800 440 aa12.2□□□□□ -0.46
TPR-208ENST00000492973 C3orf80F5H4A9 247 aa12.19□□□□□ -0.46
TPR-208ENST00000492973 PACS2Q86VP3 889 aa12.19□□□□□ -0.46
TPR-208ENST00000492973 BARGINQ6ZT62 677 aa12.17□□□□□ -0.46
TPR-208ENST00000492973 NBPF3Q9H094 633 aa12.16□□□□□ -0.46
TPR-208ENST00000492973 ADGRG1Q9Y653 693 aa12.16□□□□□ -0.46
TPR-208ENST00000492973 NBPF26B4DH59 902 aa12.15□□□□□ -0.46
TPR-208ENST00000492973 MAP2K5Q13163 448 aa12.15□□□□□ -0.46
TPR-208ENST00000492973 SPNS2Q8IVW8 549 aa12.15□□□□□ -0.46
TPR-208ENST00000492973 TATDN2Q93075 761 aa12.15□□□□□ -0.46
TPR-208ENST00000492973 NUDT18Q6ZVK8 323 aa12.13□□□□□ -0.47
TPR-208ENST00000492973 LAPTM4BQ86VI4 370 aa12.13□□□□□ -0.47
TPR-208ENST00000492973 SEPT9Q9UHD8 586 aaPredicted RBP12.13□□□□□ -0.47
TPR-208ENST00000492973 PNMA3Q9UL41 463 aa12.13□□□□□ -0.47
TPR-208ENST00000492973 FAM161AQ3B820 660 aa12.12□□□□□ -0.47
TPR-208ENST00000492973 EYA1Q99502 592 aa12.12□□□□□ -0.47
TPR-208ENST00000492973 MINK1Q8N4C8 1332 aaPredicted RBP12.11□□□□□ -0.47
TPR-208ENST00000492973 SMAPO00193 183 aa12.11□□□□□ -0.47
TPR-208ENST00000492973 MRPL50Q8N5N7 158 aaKnown RBP12.11□□□□□ -0.47
TPR-208ENST00000492973 CCDC88BA6NC98 1476 aa12.1□□□□□ -0.47
TPR-208ENST00000492973 IRF6O14896 467 aa12.1□□□□□ -0.47
TPR-208ENST00000492973 FAM98CQ17RN3 349 aaKnown RBP12.1□□□□□ -0.47
TPR-208ENST00000492973 OATP04181 439 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms