RNA–Protein interactions for RNA: ENST00000492606.1

UBR4-215, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 314 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-215ENST00000492606 SUPT6HQ7KZ85 1726 aaKnown RBP7.83□□□□□ -1.16
UBR4-215ENST00000492606 NHSL1Q5SYE7 1610 aa7.82□□□□□ -1.16
UBR4-215ENST00000492606 DISP1Q96F81 1524 aa7.82□□□□□ -1.16
UBR4-215ENST00000492606 RGL2O15211 777 aa7.81□□□□□ -1.16
UBR4-215ENST00000492606 ECM2O94769 699 aaPredicted RBP7.81□□□□□ -1.16
UBR4-215ENST00000492606 HECW1Q76N89 1606 aa7.8□□□□□ -1.16
UBR4-215ENST00000492606 NEURL4Q96JN8 1562 aa7.8□□□□□ -1.16
UBR4-215ENST00000492606 FAM135BQ49AJ0 1406 aa7.79□□□□□ -1.16
UBR4-215ENST00000492606 HRCP23327 699 aa7.79□□□□□ -1.16
UBR4-215ENST00000492606 WRNQ14191 1432 aaPredicted RBP eCLIP7.78□□□□□ -1.16
UBR4-215ENST00000492606 PSDA5PKW4 1024 aaPredicted RBP7.78□□□□□ -1.16
UBR4-215ENST00000492606 ATAD2Q6PL18 1390 aa7.78□□□□□ -1.16
UBR4-215ENST00000492606 ATP10AO60312 1499 aa7.78□□□□□ -1.16
UBR4-215ENST00000492606 ZNF142P52746 1687 aaPredicted RBP7.78□□□□□ -1.16
UBR4-215ENST00000492606 MAGI2Q86UL8 1455 aa7.77□□□□□ -1.17
UBR4-215ENST00000492606 PRELPP51888 382 aa7.77□□□□□ -1.17
UBR4-215ENST00000492606 C9orf84Q5VXU9 1444 aa7.77□□□□□ -1.17
UBR4-215ENST00000492606 BCL9LQ86UU0 1499 aa7.75□□□□□ -1.17
UBR4-215ENST00000492606 JCADQ9P266 1359 aa7.75□□□□□ -1.17
UBR4-215ENST00000492606 MEX3CQ5U5Q3 659 aaKnown RBP7.75□□□□□ -1.17
UBR4-215ENST00000492606 ROBO1Q9Y6N7 1651 aa7.75□□□□□ -1.17
UBR4-215ENST00000492606 CEP170BQ9Y4F5 1589 aaPredicted RBP7.75□□□□□ -1.17
UBR4-215ENST00000492606 MYO3AQ8NEV4 1616 aa7.74□□□□□ -1.17
UBR4-215ENST00000492606 XIRP1Q702N8 1843 aaKnown RBP7.74□□□□□ -1.17
UBR4-215ENST00000492606 BBXQ8WY36 941 aaPredicted RBP7.74□□□□□ -1.17
UBR4-215ENST00000492606 NPATQ14207 1427 aa7.74□□□□□ -1.17
UBR4-215ENST00000492606 POLR1AO95602 1720 aaPredicted RBP7.74□□□□□ -1.17
UBR4-215ENST00000492606 ABCA8O94911 1581 aa7.73□□□□□ -1.17
UBR4-215ENST00000492606 MNX1P50219 401 aaPredicted RBP7.73□□□□□ -1.17
UBR4-215ENST00000492606 NUBP1P53384 320 aa7.73□□□□□ -1.17
UBR4-215ENST00000492606 HAP1P54257 671 aaPredicted RBP7.72□□□□□ -1.17
UBR4-215ENST00000492606 RBM6P78332 1123 aaKnown RBP7.72□□□□□ -1.17
UBR4-215ENST00000492606 AKT1S1Q96B36 256 aa7.72□□□□□ -1.17
UBR4-215ENST00000492606 CDK13Q14004 1512 aaKnown RBP7.72□□□□□ -1.17
UBR4-215ENST00000492606 DEFB132Q7Z7B7 95 aa7.71□□□□□ -1.18
UBR4-215ENST00000492606 UTRNP46939 3433 aa7.71□□□□□ -1.18
UBR4-215ENST00000492606 PHLPP1O60346 1717 aa7.71□□□□□ -1.18
UBR4-215ENST00000492606 AFF2P51816 1311 aa7.71□□□□□ -1.18
UBR4-215ENST00000492606 COL13A1Q5TAT6 717 aaPredicted RBP7.7□□□□□ -1.18
UBR4-215ENST00000492606 CCDC125Q86Z20 511 aa7.7□□□□□ -1.18
UBR4-215ENST00000492606 RNF25Q96BH1 459 aaPredicted RBP7.7□□□□□ -1.18
UBR4-215ENST00000492606 CREBZFQ9NS37 354 aa7.7□□□□□ -1.18
UBR4-215ENST00000492606 SYNMO15061 1565 aa7.7□□□□□ -1.18
UBR4-215ENST00000492606 IQGAP2Q13576 1575 aa7.7□□□□□ -1.18
UBR4-215ENST00000492606 ARID3CA6NKF2 412 aa7.69□□□□□ -1.18
UBR4-215ENST00000492606 QTRT2Q9H974 415 aaKnown RBP7.69□□□□□ -1.18
UBR4-215ENST00000492606 ZBTB47Q9UFB7 747 aaPredicted RBP7.69□□□□□ -1.18
UBR4-215ENST00000492606 CIZ1Q9ULV3 898 aaPredicted RBP7.69□□□□□ -1.18
UBR4-215ENST00000492606 KDM2AQ9Y2K7 1162 aa7.69□□□□□ -1.18
UBR4-215ENST00000492606 CAMTA1Q9Y6Y1 1673 aa7.69□□□□□ -1.18
UBR4-215ENST00000492606 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP7.68□□□□□ -1.18
UBR4-215ENST00000492606 REM2Q8IYK8 340 aaPredicted RBP7.68□□□□□ -1.18
UBR4-215ENST00000492606 DNMT1P26358 1616 aaKnown RBP7.67□□□□□ -1.18
UBR4-215ENST00000492606 SPDYE1Q8NFV5 336 aaPredicted RBP7.67□□□□□ -1.18
UBR4-215ENST00000492606 ESF1Q9H501 851 aaKnown RBP7.67□□□□□ -1.18
UBR4-215ENST00000492606 SPATA31A6Q5VVP1 1343 aa7.67□□□□□ -1.18
UBR4-215ENST00000492606 COL16A1Q07092 1604 aaPredicted RBP7.67□□□□□ -1.18
UBR4-215ENST00000492606 VSIG10Q8N0Z9 540 aa7.66□□□□□ -1.18
UBR4-215ENST00000492606 RBM42Q9BTD8 480 aaKnown RBP7.66□□□□□ -1.18
UBR4-215ENST00000492606 NWD1Q149M9 1564 aa7.66□□□□□ -1.18
UBR4-215ENST00000492606 AGLP35573 1532 aa7.65□□□□□ -1.18
UBR4-215ENST00000492606 PAXIP1Q6ZW49 1069 aaPredicted RBP7.65□□□□□ -1.18
UBR4-215ENST00000492606 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.65□□□□□ -1.18
UBR4-215ENST00000492606 ATP10BO94823 1461 aa7.64□□□□□ -1.19
UBR4-215ENST00000492606 ZMYM3Q14202 1370 aa7.64□□□□□ -1.19
UBR4-215ENST00000492606 PLEKHG5O94827 1062 aa7.64□□□□□ -1.19
UBR4-215ENST00000492606 MROH2AA6NES4 1674 aa7.63□□□□□ -1.19
UBR4-215ENST00000492606 NPHP4O75161 1426 aaPredicted RBP7.63□□□□□ -1.19
UBR4-215ENST00000492606 CNTLNQ9NXG0 1405 aa7.63□□□□□ -1.19
UBR4-215ENST00000492606 TNS4Q8IZW8 715 aa7.63□□□□□ -1.19
UBR4-215ENST00000492606 KDM5CP41229 1560 aa7.63□□□□□ -1.19
UBR4-215ENST00000492606 A2ML1A8K2U0 1454 aa7.62□□□□□ -1.19
UBR4-215ENST00000492606 GIGYF1O75420 1035 aaPredicted RBP7.62□□□□□ -1.19
UBR4-215ENST00000492606 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.62□□□□□ -1.19
UBR4-215ENST00000492606 UGGT2Q9NYU1 1516 aa7.62□□□□□ -1.19
UBR4-215ENST00000492606 SCAPERQ9BY12 1400 aa7.61□□□□□ -1.19
UBR4-215ENST00000492606 IGF1RP08069 1367 aa7.61□□□□□ -1.19
UBR4-215ENST00000492606 SHPRHQ149N8 1683 aa7.61□□□□□ -1.19
UBR4-215ENST00000492606 BIVM-ERCC5R4GMW8 1640 aa7.61□□□□□ -1.19
UBR4-215ENST00000492606 CHGAP10645 457 aaKnown RBP7.61□□□□□ -1.19
UBR4-215ENST00000492606 CFAP44Q96MT7 982 aa7.61□□□□□ -1.19
UBR4-215ENST00000492606 CLEC11AQ9Y240 323 aa7.61□□□□□ -1.19
UBR4-215ENST00000492606 CFAP74Q9C0B2 1584 aa7.61□□□□□ -1.19
UBR4-215ENST00000492606 MED14O60244 1454 aa7.61□□□□□ -1.19
UBR4-215ENST00000492606 SCAF11Q99590 1463 aaKnown RBP7.61□□□□□ -1.19
UBR4-215ENST00000492606 RTEL1-TNFRSF6BF6WH68 1400 aa7.61□□□□□ -1.19
UBR4-215ENST00000492606 BLMP54132 1417 aaPredicted RBP7.61□□□□□ -1.19
UBR4-215ENST00000492606 FGD6Q6ZV73 1430 aa7.61□□□□□ -1.19
UBR4-215ENST00000492606 DIP2CQ9Y2E4 1556 aa7.6□□□□□ -1.19
UBR4-215ENST00000492606 PRR29P0C7W0 189 aa7.6□□□□□ -1.19
UBR4-215ENST00000492606 GSE1Q14687 1217 aa7.6□□□□□ -1.19
UBR4-215ENST00000492606 RASEFQ8IZ41 740 aa7.6□□□□□ -1.19
UBR4-215ENST00000492606 HS6ST3Q8IZP7 471 aa7.6□□□□□ -1.19
UBR4-215ENST00000492606 TSHZ2Q9NRE2 1034 aa7.6□□□□□ -1.19
UBR4-215ENST00000492606 IQGAP1P46940 1657 aa7.6□□□□□ -1.19
UBR4-215ENST00000492606 CHD4Q14839 1912 aa7.59□□□□□ -1.19
UBR4-215ENST00000492606 PITPNM1O00562 1244 aa7.59□□□□□ -1.19
UBR4-215ENST00000492606 R3HDM1Q15032 1099 aaKnown RBP7.59□□□□□ -1.19
UBR4-215ENST00000492606 ANKLE2Q86XL3 938 aa7.59□□□□□ -1.19
UBR4-215ENST00000492606 NGLY1Q96IV0 654 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms