RNA–Protein interactions for RNA: ENST00000492485.5

TRIOBP-211, Transcript of TRIO and F-actin binding protein, humanhuman

TSL 1 (best)

Gene TRIOBP, Length 3,948 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIOBP-211ENST00000492485 CENPJQ9HC77 1338 aaPredicted RBP15.74■□□□□ 0.11
TRIOBP-211ENST00000492485 CADPSQ9ULU8 1353 aa15.73■□□□□ 0.11
TRIOBP-211ENST00000492485 BCL11BQ9C0K0 894 aaPredicted RBP15.73■□□□□ 0.11
TRIOBP-211ENST00000492485 GOLGA6L3A6NEY3 463 aa15.72■□□□□ 0.11
TRIOBP-211ENST00000492485 POGKQ9P215 609 aa15.72■□□□□ 0.11
TRIOBP-211ENST00000492485 MPNDQ8N594 471 aa15.72■□□□□ 0.11
TRIOBP-211ENST00000492485 FGD5Q6ZNL6 1462 aa15.72■□□□□ 0.11
TRIOBP-211ENST00000492485 PRXQ9BXM0 1461 aa15.71■□□□□ 0.11
TRIOBP-211ENST00000492485 GOLGA6L22H0YM25 854 aa15.7■□□□□ 0.1
TRIOBP-211ENST00000492485 CENPQQ7L2Z9 268 aaPredicted RBP15.7■□□□□ 0.1
TRIOBP-211ENST00000492485 CDCA8Q53HL2 280 aa15.7■□□□□ 0.1
TRIOBP-211ENST00000492485 MLECQ14165 292 aa15.69■□□□□ 0.1
TRIOBP-211ENST00000492485 KIF3BO15066 747 aa15.69■□□□□ 0.1
TRIOBP-211ENST00000492485 NCOA2Q15596 1464 aa15.68■□□□□ 0.1
TRIOBP-211ENST00000492485 LNPKQ9C0E8 428 aa15.67■□□□□ 0.1
TRIOBP-211ENST00000492485 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.67■□□□□ 0.1
TRIOBP-211ENST00000492485 PDE3BQ13370 1112 aa15.66■□□□□ 0.1
TRIOBP-211ENST00000492485 USP35Q9P2H5 1018 aa15.66■□□□□ 0.1
TRIOBP-211ENST00000492485 ANKRD30AQ9BXX3 1397 aa15.66■□□□□ 0.1
TRIOBP-211ENST00000492485 MYOM3Q5VTT5 1437 aa15.66■□□□□ 0.1
TRIOBP-211ENST00000492485 MAPKBP1O60336 1514 aa15.65■□□□□ 0.1
TRIOBP-211ENST00000492485 AQRO60306 1485 aaKnown RBP eCLIP15.65■□□□□ 0.1
TRIOBP-211ENST00000492485 TMEM132EQ6IEE7 984 aa15.64■□□□□ 0.09
TRIOBP-211ENST00000492485 RWDD1Q9H446 243 aaPredicted RBP15.64■□□□□ 0.09
TRIOBP-211ENST00000492485 NAIPQ13075 1403 aa15.63■□□□□ 0.09
TRIOBP-211ENST00000492485 PTPRKQ15262 1439 aa15.63■□□□□ 0.09
TRIOBP-211ENST00000492485 L1TD1Q5T7N2 865 aaKnown RBP15.63■□□□□ 0.09
TRIOBP-211ENST00000492485 ZNF428Q96B54 188 aa15.63■□□□□ 0.09
TRIOBP-211ENST00000492485 UNC13AQ9UPW8 1703 aa15.63■□□□□ 0.09
TRIOBP-211ENST00000492485 ANKRD45Q5TZF3 282 aa15.62■□□□□ 0.09
TRIOBP-211ENST00000492485 TSR2Q969E8 191 aaKnown RBP15.62■□□□□ 0.09
TRIOBP-211ENST00000492485 JPH4Q96JJ6 628 aa15.62■□□□□ 0.09
TRIOBP-211ENST00000492485 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.62■□□□□ 0.09
TRIOBP-211ENST00000492485 MS4A1P11836 297 aa15.62■□□□□ 0.09
TRIOBP-211ENST00000492485 C1orf115Q9H7X2 142 aa15.61■□□□□ 0.09
TRIOBP-211ENST00000492485 MSNP26038 577 aaKnown RBP15.61■□□□□ 0.09
TRIOBP-211ENST00000492485 HSP90AA2PQ14568 343 aaPredicted RBP15.61■□□□□ 0.09
TRIOBP-211ENST00000492485 SLC4A10Q6U841 1118 aa15.61■□□□□ 0.09
TRIOBP-211ENST00000492485 NPM1P06748 294 aaKnown RBP eCLIP15.59■□□□□ 0.09
TRIOBP-211ENST00000492485 CUX1P39880 1505 aa15.58■□□□□ 0.09
TRIOBP-211ENST00000492485 ESF1Q9H501 851 aaKnown RBP15.58■□□□□ 0.08
TRIOBP-211ENST00000492485 CCDC144AA2RUR9 1427 aa15.57■□□□□ 0.08
TRIOBP-211ENST00000492485 CFAP70Q5T0N1 1121 aa15.57■□□□□ 0.08
TRIOBP-211ENST00000492485 NECTIN2Q92692 538 aa15.57■□□□□ 0.08
TRIOBP-211ENST00000492485 FANCD2Q9BXW9 1451 aa15.57■□□□□ 0.08
TRIOBP-211ENST00000492485 PPP2R1AP30153 589 aa15.57■□□□□ 0.08
TRIOBP-211ENST00000492485 DDX49Q9Y6V7 483 aaKnown RBP15.57■□□□□ 0.08
TRIOBP-211ENST00000492485 NESP48681 1621 aa15.56■□□□□ 0.08
TRIOBP-211ENST00000492485 FAM13BQ9NYF5 915 aa15.56■□□□□ 0.08
TRIOBP-211ENST00000492485 GGNBP2Q9H3C7 697 aa15.55■□□□□ 0.08
TRIOBP-211ENST00000492485 LMOD2Q6P5Q4 547 aa15.55■□□□□ 0.08
TRIOBP-211ENST00000492485 PDZRN3Q9UPQ7 1066 aa15.55■□□□□ 0.08
TRIOBP-211ENST00000492485 HFM1A2PYH4 1435 aa15.55■□□□□ 0.08
TRIOBP-211ENST00000492485 SLC12A5Q9H2X9 1139 aa15.54■□□□□ 0.08
TRIOBP-211ENST00000492485 ERCC6Q03468 1493 aa15.54■□□□□ 0.08
TRIOBP-211ENST00000492485 HMOX1P09601 288 aa15.54■□□□□ 0.08
TRIOBP-211ENST00000492485 RNF214Q8ND24 703 aa15.54■□□□□ 0.08
TRIOBP-211ENST00000492485 TNNQ9UQP3 1299 aa15.54■□□□□ 0.08
TRIOBP-211ENST00000492485 SMG6Q86US8 1419 aaKnown RBP15.54■□□□□ 0.08
TRIOBP-211ENST00000492485 TCP11L2Q8N4U5 519 aa15.54■□□□□ 0.08
TRIOBP-211ENST00000492485 TIAM1Q13009 1591 aa15.54■□□□□ 0.08
TRIOBP-211ENST00000492485 RBM10P98175 930 aaKnown RBP15.53■□□□□ 0.08
TRIOBP-211ENST00000492485 PMFBP1Q8TBY8 1022 aa15.53■□□□□ 0.08
TRIOBP-211ENST00000492485 NAP1L2Q9ULW6 460 aaPredicted RBP15.53■□□□□ 0.08
TRIOBP-211ENST00000492485 A0A0G2JS52 829 aa15.52■□□□□ 0.08
TRIOBP-211ENST00000492485 CHMP3Q9Y3E7 222 aa15.52■□□□□ 0.08
TRIOBP-211ENST00000492485 E9PSI1 815 aa15.52■□□□□ 0.08
TRIOBP-211ENST00000492485 MTHFSP49914 203 aa15.52■□□□□ 0.08
TRIOBP-211ENST00000492485 AFAP1Q8N556 730 aa15.52■□□□□ 0.07
TRIOBP-211ENST00000492485 C22orf23Q9BZE7 217 aa15.51■□□□□ 0.07
TRIOBP-211ENST00000492485 MINK1Q8N4C8 1332 aaPredicted RBP15.51■□□□□ 0.07
TRIOBP-211ENST00000492485 SEC24BO95487 1268 aa15.5■□□□□ 0.07
TRIOBP-211ENST00000492485 IGHDP01880 384 aa15.5■□□□□ 0.07
TRIOBP-211ENST00000492485 GBP4Q96PP9 640 aa15.5■□□□□ 0.07
TRIOBP-211ENST00000492485 CASKIN1Q8WXD9 1431 aa15.5■□□□□ 0.07
TRIOBP-211ENST00000492485 PANK2Q9BZ23 570 aa15.49■□□□□ 0.07
TRIOBP-211ENST00000492485 PRG4Q92954 1404 aaPredicted RBP15.49■□□□□ 0.07
TRIOBP-211ENST00000492485 PEG3Q9GZU2 1588 aa15.49■□□□□ 0.07
TRIOBP-211ENST00000492485 TRAK2O60296 914 aa15.49■□□□□ 0.07
TRIOBP-211ENST00000492485 ANKRD50Q9ULJ7 1429 aa15.49■□□□□ 0.07
TRIOBP-211ENST00000492485 TRIM6-TRIM34B2RNG4 842 aa15.49■□□□□ 0.07
TRIOBP-211ENST00000492485 BRD4O60885 1362 aaPredicted RBP15.48■□□□□ 0.07
TRIOBP-211ENST00000492485 CALD1Q05682 793 aaKnown RBP15.48■□□□□ 0.07
TRIOBP-211ENST00000492485 ZKSCAN2Q63HK3 967 aa15.48■□□□□ 0.07
TRIOBP-211ENST00000492485 CABP2Q9NPB3 220 aa15.48■□□□□ 0.07
TRIOBP-211ENST00000492485 RSPH6AQ9H0K4 717 aa15.48■□□□□ 0.07
TRIOBP-211ENST00000492485 BICRAQ9NZM4 1560 aa15.47■□□□□ 0.07
TRIOBP-211ENST00000492485 CGNL1Q0VF96 1302 aa15.47■□□□□ 0.07
TRIOBP-211ENST00000492485 DZIP1LQ8IYY4 767 aaKnown RBP15.47■□□□□ 0.07
TRIOBP-211ENST00000492485 KCNJ4P48050 445 aa15.47■□□□□ 0.07
TRIOBP-211ENST00000492485 OS9Q13438 667 aaPredicted RBP15.47■□□□□ 0.07
TRIOBP-211ENST00000492485 CDK13Q14004 1512 aaKnown RBP15.47■□□□□ 0.07
TRIOBP-211ENST00000492485 CCDC9Q9Y3X0 531 aaKnown RBP15.47■□□□□ 0.07
TRIOBP-211ENST00000492485 FBLN1P23142 703 aa15.46■□□□□ 0.07
TRIOBP-211ENST00000492485 THUMPD2Q9BTF0 503 aaKnown RBP15.46■□□□□ 0.07
TRIOBP-211ENST00000492485 EXOSC9Q06265 439 aaKnown RBP15.46■□□□□ 0.07
TRIOBP-211ENST00000492485 LTV1Q96GA3 475 aaPredicted RBP15.46■□□□□ 0.07
TRIOBP-211ENST00000492485 RIPK4P57078 832 aa15.45■□□□□ 0.06
TRIOBP-211ENST00000492485 MCTP1Q6DN14 999 aa15.45■□□□□ 0.06
TRIOBP-211ENST00000492485 CASC1Q6TDU7 716 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms