RNA–Protein interactions for RNA: ENST00000491028.1

MCF2L-230, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-230ENST00000491028 RNF17Q9BXT8 1623 aaKnown RBP27.8■■■□□ 2.04
MCF2L-230ENST00000491028 SIGLEC1Q9BZZ2 1709 aa27.78■■■□□ 2.04
MCF2L-230ENST00000491028 PRDM15P57071 1507 aaPredicted RBP27.74■■■□□ 2.03
MCF2L-230ENST00000491028 MROH1Q8NDA8 1641 aa27.72■■■□□ 2.03
MCF2L-230ENST00000491028 KIF3BO15066 747 aa27.72■■■□□ 2.03
MCF2L-230ENST00000491028 KDM5DQ9BY66 1539 aa27.72■■■□□ 2.03
MCF2L-230ENST00000491028 IQGAP3Q86VI3 1631 aa27.67■■■□□ 2.02
MCF2L-230ENST00000491028 FAM135AQ9P2D6 1515 aa27.67■■■□□ 2.02
MCF2L-230ENST00000491028 VWDEQ8N2E2 1590 aa27.66■■■□□ 2.02
MCF2L-230ENST00000491028 ZC3H13Q5T200 1668 aaKnown RBP27.65■■■□□ 2.02
MCF2L-230ENST00000491028 KANK1Q14678 1352 aa27.64■■■□□ 2.02
MCF2L-230ENST00000491028 ARID4BQ4LE39 1312 aaPredicted RBP27.63■■■□□ 2.01
MCF2L-230ENST00000491028 TRIM52Q96A61 297 aa27.62■■■□□ 2.01
MCF2L-230ENST00000491028 NUP155O75694 1391 aa27.61■■■□□ 2.01
MCF2L-230ENST00000491028 GGT6Q6P531 493 aa27.6■■■□□ 2.01
MCF2L-230ENST00000491028 PZPP20742 1482 aa27.59■■■□□ 2.01
MCF2L-230ENST00000491028 LMTK2Q8IWU2 1503 aa27.59■■■□□ 2.01
MCF2L-230ENST00000491028 PPP6R1Q9UPN7 881 aa27.59■■■□□ 2.01
MCF2L-230ENST00000491028 CEP152O94986 1710 aa27.58■■■□□ 2.01
MCF2L-230ENST00000491028 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.58■■■□□ 2.01
MCF2L-230ENST00000491028 TET3O43151 1660 aa27.57■■■□□ 2
MCF2L-230ENST00000491028 ABCC3O15438 1527 aa27.57■■■□□ 2
MCF2L-230ENST00000491028 CAMSAP1Q5T5Y3 1602 aa27.52■■■□□ 2
MCF2L-230ENST00000491028 FER1L4A9Z1Z3 1794 aa27.51■■□□□ 1.99
MCF2L-230ENST00000491028 MLECQ14165 292 aa27.51■■□□□ 1.99
MCF2L-230ENST00000491028 CLTCQ00610 1675 aaKnown RBP27.51■■□□□ 1.99
MCF2L-230ENST00000491028 EFCAB6Q5THR3 1501 aa27.51■■□□□ 1.99
MCF2L-230ENST00000491028 DHX57Q6P158 1386 aaKnown RBP27.5■■□□□ 1.99
MCF2L-230ENST00000491028 WASHC2CQ9Y4E1 1318 aa27.5■■□□□ 1.99
MCF2L-230ENST00000491028 MROH2AA6NES4 1674 aa27.49■■□□□ 1.99
MCF2L-230ENST00000491028 MPHOSPH9Q99550 1183 aa27.49■■□□□ 1.99
MCF2L-230ENST00000491028 SLC4A1APQ9BWU0 796 aaKnown RBP27.49■■□□□ 1.99
MCF2L-230ENST00000491028 ADAMTSL3P82987 1691 aa27.49■■□□□ 1.99
MCF2L-230ENST00000491028 CNTLNQ9NXG0 1405 aa27.49■■□□□ 1.99
MCF2L-230ENST00000491028 E9PCH4 1651 aa27.46■■□□□ 1.99
MCF2L-230ENST00000491028 ARHGAP31Q2M1Z3 1444 aa27.44■■□□□ 1.98
MCF2L-230ENST00000491028 ESF1Q9H501 851 aaKnown RBP27.44■■□□□ 1.98
MCF2L-230ENST00000491028 RPRD2Q5VT52 1461 aaKnown RBP27.44■■□□□ 1.98
MCF2L-230ENST00000491028 MADDQ8WXG6 1647 aa27.43■■□□□ 1.98
MCF2L-230ENST00000491028 PKD2Q13563 968 aa27.4■■□□□ 1.98
MCF2L-230ENST00000491028 NPATQ14207 1427 aa27.39■■□□□ 1.97
MCF2L-230ENST00000491028 RIMS1Q86UR5 1692 aaKnown RBP27.38■■□□□ 1.97
MCF2L-230ENST00000491028 SPHKAPQ2M3C7 1700 aa27.36■■□□□ 1.97
MCF2L-230ENST00000491028 ZMYM3Q14202 1370 aa27.34■■□□□ 1.97
MCF2L-230ENST00000491028 C3P01024 1663 aa27.33■■□□□ 1.97
MCF2L-230ENST00000491028 PREX1Q8TCU6 1659 aa27.33■■□□□ 1.97
MCF2L-230ENST00000491028 CCER1Q8TC90 406 aaPredicted RBP27.32■■□□□ 1.96
MCF2L-230ENST00000491028 CLSPNQ9HAW4 1339 aa27.32■■□□□ 1.96
MCF2L-230ENST00000491028 PTPRTO14522 1441 aa27.3■■□□□ 1.96
MCF2L-230ENST00000491028 TRPM2O94759 1503 aa27.3■■□□□ 1.96
MCF2L-230ENST00000491028 FOXD1Q16676 465 aa27.29■■□□□ 1.96
MCF2L-230ENST00000491028 SPATA31D1Q6ZQQ2 1576 aa27.29■■□□□ 1.96
MCF2L-230ENST00000491028 ERVK-7P63135 1459 aa27.28■■□□□ 1.96
MCF2L-230ENST00000491028 NOS1P29475 1434 aa27.28■■□□□ 1.96
MCF2L-230ENST00000491028 ANKRD30BQ9BXX2 1392 aa27.28■■□□□ 1.96
MCF2L-230ENST00000491028 KDM4FA0A1W2PPD8 638 aa27.28■■□□□ 1.96
MCF2L-230ENST00000491028 CFAP65Q6ZU64 1925 aaKnown RBP27.26■■□□□ 1.95
MCF2L-230ENST00000491028 PLA2R1Q13018 1463 aa27.25■■□□□ 1.95
MCF2L-230ENST00000491028 SYNMO15061 1565 aa27.23■■□□□ 1.95
MCF2L-230ENST00000491028 PTPRMP28827 1452 aa27.21■■□□□ 1.95
MCF2L-230ENST00000491028 PIK3C2BO00750 1634 aa27.2■■□□□ 1.95
MCF2L-230ENST00000491028 CCDC144AA2RUR9 1427 aa27.19■■□□□ 1.94
MCF2L-230ENST00000491028 CLTCL1P53675 1640 aa27.19■■□□□ 1.94
MCF2L-230ENST00000491028 FBXO31Q5XUX0 539 aaPredicted RBP27.17■■□□□ 1.94
MCF2L-230ENST00000491028 TNRQ92752 1358 aa27.15■■□□□ 1.94
MCF2L-230ENST00000491028 CEBPAP49715 358 aaPredicted RBP27.14■■□□□ 1.94
MCF2L-230ENST00000491028 UGGT1Q9NYU2 1555 aa27.14■■□□□ 1.93
MCF2L-230ENST00000491028 KIF1BO60333 1816 aa27.12■■□□□ 1.93
MCF2L-230ENST00000491028 SLC52A1Q9NWF4 448 aa27.12■■□□□ 1.93
MCF2L-230ENST00000491028 NEURL4Q96JN8 1562 aa27.11■■□□□ 1.93
MCF2L-230ENST00000491028 MYO3AQ8NEV4 1616 aa27.1■■□□□ 1.93
MCF2L-230ENST00000491028 NLRP1Q9C000 1473 aa27.1■■□□□ 1.93
MCF2L-230ENST00000491028 SIN3AQ96ST3 1273 aa27.08■■□□□ 1.93
MCF2L-230ENST00000491028 KDM5AP29375 1690 aaKnown RBP27.08■■□□□ 1.92
MCF2L-230ENST00000491028 SETD1BQ9UPS6 1966 aaKnown RBP27.06■■□□□ 1.92
MCF2L-230ENST00000491028 ADGRB3O60242 1522 aa27.06■■□□□ 1.92
MCF2L-230ENST00000491028 PLPPR3Q6T4P5 718 aa27.05■■□□□ 1.92
MCF2L-230ENST00000491028 ZNF142P52746 1687 aaPredicted RBP27.04■■□□□ 1.92
MCF2L-230ENST00000491028 TMEM131LA2VDJ0 1609 aa27.03■■□□□ 1.92
MCF2L-230ENST00000491028 IDI1Q13907 227 aa27.03■■□□□ 1.92
MCF2L-230ENST00000491028 SPATA31E1Q6ZUB1 1445 aa27.02■■□□□ 1.92
MCF2L-230ENST00000491028 NEUROD1Q13562 356 aa27.02■■□□□ 1.92
MCF2L-230ENST00000491028 A2ML1A8K2U0 1454 aa27■■□□□ 1.91
MCF2L-230ENST00000491028 UBR1Q8IWV7 1749 aa26.99■■□□□ 1.91
MCF2L-230ENST00000491028 CEP170BQ9Y4F5 1589 aaPredicted RBP26.99■■□□□ 1.91
MCF2L-230ENST00000491028 MYO5BQ9ULV0 1848 aa26.98■■□□□ 1.91
MCF2L-230ENST00000491028 TONSLQ96HA7 1378 aa26.97■■□□□ 1.91
MCF2L-230ENST00000491028 TIMELESSQ9UNS1 1208 aa26.97■■□□□ 1.91
MCF2L-230ENST00000491028 UHRF1BP1Q6BDS2 1440 aa26.96■■□□□ 1.91
MCF2L-230ENST00000491028 IFT172Q9UG01 1749 aa26.93■■□□□ 1.9
MCF2L-230ENST00000491028 CHGAP10645 457 aaKnown RBP26.93■■□□□ 1.9
MCF2L-230ENST00000491028 STAG3Q9UJ98 1225 aa26.92■■□□□ 1.9
MCF2L-230ENST00000491028 PPLO60437 1756 aa26.9■■□□□ 1.9
MCF2L-230ENST00000491028 NEXMIFQ5QGS0 1516 aa26.88■■□□□ 1.89
MCF2L-230ENST00000491028 RPGRIP1LQ68CZ1 1315 aa26.88■■□□□ 1.89
MCF2L-230ENST00000491028 ZEB1P37275 1124 aaPredicted RBP26.87■■□□□ 1.89
MCF2L-230ENST00000491028 RGL3Q3MIN7 710 aa26.87■■□□□ 1.89
MCF2L-230ENST00000491028 ZNF326Q5BKZ1 582 aaKnown RBP26.86■■□□□ 1.89
MCF2L-230ENST00000491028 L3MBTL2Q969R5 705 aa26.85■■□□□ 1.89
MCF2L-230ENST00000491028 SLIT1O75093 1534 aa26.85■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms