RNA–Protein interactions for RNA: ENST00000489621.1

PDCL3P4-201, Transcript of phosducin-like 3 pseudogene 4, humanhuman

BASIC

Gene PDCL3P4, Length 720 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCL3P4-201ENST00000489621 E2F4Q16254 413 aa10.25□□□□□ -0.77
PDCL3P4-201ENST00000489621 ADAM33Q9BZ11 813 aa10.23□□□□□ -0.77
PDCL3P4-201ENST00000489621 PHF14O94880 888 aa10.22□□□□□ -0.77
PDCL3P4-201ENST00000489621 TYW1BQ6NUM6 668 aa10.21□□□□□ -0.77
PDCL3P4-201ENST00000489621 FBXW7Q969H0 707 aa10.21□□□□□ -0.77
PDCL3P4-201ENST00000489621 PCDHGA10Q9Y5H3 936 aa10.21□□□□□ -0.77
PDCL3P4-201ENST00000489621 TSHZ2Q9NRE2 1034 aa10.2□□□□□ -0.78
PDCL3P4-201ENST00000489621 CUX2O14529 1486 aa10.19□□□□□ -0.78
PDCL3P4-201ENST00000489621 SPDYE16A6NNV3 312 aaPredicted RBP10.18□□□□□ -0.78
PDCL3P4-201ENST00000489621 EPAS1Q99814 870 aa10.18□□□□□ -0.78
PDCL3P4-201ENST00000489621 VPS9D1Q9Y2B5 631 aa10.18□□□□□ -0.78
PDCL3P4-201ENST00000489621 HRO43593 1189 aa10.17□□□□□ -0.78
PDCL3P4-201ENST00000489621 DDX12PQ92771 950 aa10.17□□□□□ -0.78
PDCL3P4-201ENST00000489621 SLC4A5Q9BY07 1137 aa10.17□□□□□ -0.78
PDCL3P4-201ENST00000489621 PDIA6Q15084 440 aa10.15□□□□□ -0.78
PDCL3P4-201ENST00000489621 ZBED2Q9BTP6 218 aa10.15□□□□□ -0.78
PDCL3P4-201ENST00000489621 PPP1R3GB7ZBB8 358 aa10.13□□□□□ -0.79
PDCL3P4-201ENST00000489621 RBM33Q96EV2 1170 aaKnown RBP10.13□□□□□ -0.79
PDCL3P4-201ENST00000489621 NBR1Q14596 966 aa10.12□□□□□ -0.79
PDCL3P4-201ENST00000489621 ARIH1Q9Y4X5 557 aaPredicted RBP10.12□□□□□ -0.79
PDCL3P4-201ENST00000489621 GOLGA8CPA6NN73 597 aa10.11□□□□□ -0.79
PDCL3P4-201ENST00000489621 KCTD12Q96CX2 325 aaKnown RBP10.11□□□□□ -0.79
PDCL3P4-201ENST00000489621 C6orf132Q5T0Z8 1188 aa10.1□□□□□ -0.79
PDCL3P4-201ENST00000489621 NBPF3Q9H094 633 aa10.1□□□□□ -0.79
PDCL3P4-201ENST00000489621 HCSTQ9UBK5 93 aa10.1□□□□□ -0.79
PDCL3P4-201ENST00000489621 GRXCR2A6NFK2 248 aa10.09□□□□□ -0.79
PDCL3P4-201ENST00000489621 MAP3K7O43318 606 aa10.09□□□□□ -0.79
PDCL3P4-201ENST00000489621 COL9A1P20849 921 aa10.09□□□□□ -0.79
PDCL3P4-201ENST00000489621 PLCB2Q00722 1185 aa10.09□□□□□ -0.79
PDCL3P4-201ENST00000489621 MRPL50Q8N5N7 158 aaKnown RBP10.09□□□□□ -0.79
PDCL3P4-201ENST00000489621 SCRIBQ14160 1630 aa10.07□□□□□ -0.8
PDCL3P4-201ENST00000489621 BHMG1C9JSJ3 638 aaPredicted RBP10.06□□□□□ -0.8
PDCL3P4-201ENST00000489621 EN1Q05925 392 aaPredicted RBP10.06□□□□□ -0.8
PDCL3P4-201ENST00000489621 PROX2Q3B8N5 592 aa10.06□□□□□ -0.8
PDCL3P4-201ENST00000489621 RABGEF1Q9UJ41 708 aa10.06□□□□□ -0.8
PDCL3P4-201ENST00000489621 ARHGEF1Q92888 912 aaKnown RBP10.04□□□□□ -0.8
PDCL3P4-201ENST00000489621 KIAA1468Q9P260 1216 aa10.03□□□□□ -0.8
PDCL3P4-201ENST00000489621 ONECUT3O60422 494 aaPredicted RBP10.02□□□□□ -0.81
PDCL3P4-201ENST00000489621 TSR1Q2NL82 804 aaKnown RBP10.02□□□□□ -0.81
PDCL3P4-201ENST00000489621 WNT2BQ93097 391 aa10.02□□□□□ -0.81
PDCL3P4-201ENST00000489621 PTPN5P54829 565 aa10.01□□□□□ -0.81
PDCL3P4-201ENST00000489621 ERCC6Q03468 1493 aa10.01□□□□□ -0.81
PDCL3P4-201ENST00000489621 TRIM6-TRIM34B2RNG4 842 aa10□□□□□ -0.81
PDCL3P4-201ENST00000489621 P3H3Q8IVL6 736 aa10□□□□□ -0.81
PDCL3P4-201ENST00000489621 KCNV2Q8TDN2 545 aa10□□□□□ -0.81
PDCL3P4-201ENST00000489621 HAP1P54257 671 aaPredicted RBP9.98□□□□□ -0.81
PDCL3P4-201ENST00000489621 THSD4Q6ZMP0 1018 aa9.98□□□□□ -0.81
PDCL3P4-201ENST00000489621 LAPTM4BQ86VI4 370 aa9.98□□□□□ -0.81
PDCL3P4-201ENST00000489621 ANKK1Q8NFD2 765 aa9.98□□□□□ -0.81
PDCL3P4-201ENST00000489621 CERKQ8TCT0 537 aa9.98□□□□□ -0.81
PDCL3P4-201ENST00000489621 OSBPP22059 807 aa9.97□□□□□ -0.81
PDCL3P4-201ENST00000489621 PACS2Q86VP3 889 aa9.97□□□□□ -0.81
PDCL3P4-201ENST00000489621 SEPT9Q9UHD8 586 aaPredicted RBP9.96□□□□□ -0.82
PDCL3P4-201ENST00000489621 PRIM1P49642 420 aaKnown RBP9.95□□□□□ -0.82
PDCL3P4-201ENST00000489621 PLA2G2EQ9NZK7 142 aa9.95□□□□□ -0.82
PDCL3P4-201ENST00000489621 PRSS12P56730 875 aa9.94□□□□□ -0.82
PDCL3P4-201ENST00000489621 CDCA7LQ96GN5 454 aa9.94□□□□□ -0.82
PDCL3P4-201ENST00000489621 SUPT5HO00267 1087 aaKnown RBP9.93□□□□□ -0.82
PDCL3P4-201ENST00000489621 ZFRQ96KR1 1074 aaKnown RBP9.93□□□□□ -0.82
PDCL3P4-201ENST00000489621 TSKSQ9UJT2 592 aa9.93□□□□□ -0.82
PDCL3P4-201ENST00000489621 FAM98CQ17RN3 349 aaKnown RBP9.92□□□□□ -0.82
PDCL3P4-201ENST00000489621 MLLT3P42568 568 aaPredicted RBP9.91□□□□□ -0.82
PDCL3P4-201ENST00000489621 CDHR5Q9HBB8 845 aa9.91□□□□□ -0.82
PDCL3P4-201ENST00000489621 SOWAHBA6NEL2 793 aa9.89□□□□□ -0.83
PDCL3P4-201ENST00000489621 BCAMP50895 628 aa9.89□□□□□ -0.83
PDCL3P4-201ENST00000489621 NCAPD3P42695 1498 aa9.89□□□□□ -0.83
PDCL3P4-201ENST00000489621 NBPF26B4DH59 902 aa9.88□□□□□ -0.83
PDCL3P4-201ENST00000489621 LRCH3Q96II8 777 aa9.87□□□□□ -0.83
PDCL3P4-201ENST00000489621 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.87□□□□□ -0.83
PDCL3P4-201ENST00000489621 PNMA3Q9UL41 463 aa9.87□□□□□ -0.83
PDCL3P4-201ENST00000489621 SMAPO00193 183 aa9.86□□□□□ -0.83
PDCL3P4-201ENST00000489621 RBM27Q9P2N5 1060 aaKnown RBP9.86□□□□□ -0.83
PDCL3P4-201ENST00000489621 SEMA3EO15041 775 aa9.85□□□□□ -0.83
PDCL3P4-201ENST00000489621 TATDN2Q93075 761 aa9.85□□□□□ -0.83
PDCL3P4-201ENST00000489621 FAM198AQ9UFP1 575 aa9.85□□□□□ -0.83
PDCL3P4-201ENST00000489621 NUTM2FA1L443 756 aa9.83□□□□□ -0.84
PDCL3P4-201ENST00000489621 HDGFP51858 240 aaKnown RBP9.83□□□□□ -0.84
PDCL3P4-201ENST00000489621 PADI6Q6TGC4 694 aa9.83□□□□□ -0.84
PDCL3P4-201ENST00000489621 NUDT18Q6ZVK8 323 aa9.83□□□□□ -0.84
PDCL3P4-201ENST00000489621 NPDC1Q9NQX5 325 aaPredicted RBP9.83□□□□□ -0.84
PDCL3P4-201ENST00000489621 NYAP1Q6ZVC0 841 aa9.82□□□□□ -0.84
PDCL3P4-201ENST00000489621 TSR3Q9UJK0 312 aaKnown RBP9.82□□□□□ -0.84
PDCL3P4-201ENST00000489621 HPS5Q9UPZ3 1129 aa9.82□□□□□ -0.84
PDCL3P4-201ENST00000489621 SMYD5Q6GMV2 418 aa9.81□□□□□ -0.84
PDCL3P4-201ENST00000489621 WBP1LQ9NX94 342 aa9.81□□□□□ -0.84
PDCL3P4-201ENST00000489621 SAMD7Q7Z3H4 446 aa9.8□□□□□ -0.84
PDCL3P4-201ENST00000489621 PPP4CP60510 307 aa9.79□□□□□ -0.84
PDCL3P4-201ENST00000489621 KDM2AQ9Y2K7 1162 aa9.79□□□□□ -0.84
PDCL3P4-201ENST00000489621 C3orf80F5H4A9 247 aa9.78□□□□□ -0.84
PDCL3P4-201ENST00000489621 PTGDRQ13258 359 aa9.78□□□□□ -0.84
PDCL3P4-201ENST00000489621 TTC13Q8NBP0 860 aa9.78□□□□□ -0.84
PDCL3P4-201ENST00000489621 VSIG10Q8N0Z9 540 aa9.77□□□□□ -0.85
PDCL3P4-201ENST00000489621 RSF1Q96T23 1441 aaPredicted RBP9.76□□□□□ -0.85
PDCL3P4-201ENST00000489621 TESPA1A2RU30 521 aaPredicted RBP9.76□□□□□ -0.85
PDCL3P4-201ENST00000489621 RNF40O75150 1001 aa9.76□□□□□ -0.85
PDCL3P4-201ENST00000489621 FCHSD2O94868 740 aa9.75□□□□□ -0.85
PDCL3P4-201ENST00000489621 SLC4A3P48751 1232 aa9.75□□□□□ -0.85
PDCL3P4-201ENST00000489621 IFFO2Q5TF58 517 aa9.75□□□□□ -0.85
PDCL3P4-201ENST00000489621 ATAD2BQ9ULI0 1458 aa9.74□□□□□ -0.85
PDCL3P4-201ENST00000489621 NESP48681 1621 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms