RNA–Protein interactions for RNA: ENST00000489544.1

SF1-218, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 584 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-218ENST00000489544 NAIPQ13075 1403 aa12.5□□□□□ -0.41
SF1-218ENST00000489544 ERBINQ96RT1 1412 aa12.5□□□□□ -0.41
SF1-218ENST00000489544 CEBPAP49715 358 aaPredicted RBP12.48□□□□□ -0.41
SF1-218ENST00000489544 HFM1A2PYH4 1435 aa12.47□□□□□ -0.41
SF1-218ENST00000489544 RIMS1Q86UR5 1692 aaKnown RBP12.47□□□□□ -0.41
SF1-218ENST00000489544 MROH1Q8NDA8 1641 aa12.47□□□□□ -0.41
SF1-218ENST00000489544 EIF2AK4Q9P2K8 1649 aaKnown RBP12.47□□□□□ -0.41
SF1-218ENST00000489544 WASHC2CQ9Y4E1 1318 aa12.46□□□□□ -0.41
SF1-218ENST00000489544 ESF1Q9H501 851 aaKnown RBP12.46□□□□□ -0.41
SF1-218ENST00000489544 PTPRMP28827 1452 aa12.46□□□□□ -0.42
SF1-218ENST00000489544 FER1L4A9Z1Z3 1794 aa12.46□□□□□ -0.42
SF1-218ENST00000489544 RNF17Q9BXT8 1623 aaKnown RBP12.45□□□□□ -0.42
SF1-218ENST00000489544 TRIM26Q12899 539 aaPredicted RBP12.44□□□□□ -0.42
SF1-218ENST00000489544 CLTCQ00610 1675 aaKnown RBP12.44□□□□□ -0.42
SF1-218ENST00000489544 GCC2Q8IWJ2 1684 aa12.43□□□□□ -0.42
SF1-218ENST00000489544 ZMYM3Q14202 1370 aa12.43□□□□□ -0.42
SF1-218ENST00000489544 ABCC3O15438 1527 aa12.42□□□□□ -0.42
SF1-218ENST00000489544 PRDM15P57071 1507 aaPredicted RBP12.42□□□□□ -0.42
SF1-218ENST00000489544 DEPDC5O75140 1603 aa12.42□□□□□ -0.42
SF1-218ENST00000489544 PPP6R1Q9UPN7 881 aa12.42□□□□□ -0.42
SF1-218ENST00000489544 SETD5Q9C0A6 1442 aa12.42□□□□□ -0.42
SF1-218ENST00000489544 KDM5DQ9BY66 1539 aa12.42□□□□□ -0.42
SF1-218ENST00000489544 FBXO31Q5XUX0 539 aaPredicted RBP12.41□□□□□ -0.42
SF1-218ENST00000489544 TRIM52Q96A61 297 aa12.41□□□□□ -0.42
SF1-218ENST00000489544 CNTLNQ9NXG0 1405 aa12.41□□□□□ -0.42
SF1-218ENST00000489544 NUP155O75694 1391 aa12.41□□□□□ -0.42
SF1-218ENST00000489544 RAB3GAP2Q9H2M9 1393 aa12.41□□□□□ -0.42
SF1-218ENST00000489544 CEP152O94986 1710 aa12.4□□□□□ -0.42
SF1-218ENST00000489544 KANK1Q14678 1352 aa12.4□□□□□ -0.42
SF1-218ENST00000489544 UNC13BO14795 1591 aa12.39□□□□□ -0.43
SF1-218ENST00000489544 VWDEQ8N2E2 1590 aa12.39□□□□□ -0.43
SF1-218ENST00000489544 C3P01024 1663 aa12.38□□□□□ -0.43
SF1-218ENST00000489544 ILDR1Q86SU0 546 aaPredicted RBP12.37□□□□□ -0.43
SF1-218ENST00000489544 PCGF6Q9BYE7 350 aa12.36□□□□□ -0.43
SF1-218ENST00000489544 CAMSAP1Q5T5Y3 1602 aa12.36□□□□□ -0.43
SF1-218ENST00000489544 LMTK2Q8IWU2 1503 aa12.36□□□□□ -0.43
SF1-218ENST00000489544 FAM135AQ9P2D6 1515 aa12.36□□□□□ -0.43
SF1-218ENST00000489544 NPATQ14207 1427 aa12.36□□□□□ -0.43
SF1-218ENST00000489544 MROH2AA6NES4 1674 aa12.35□□□□□ -0.43
SF1-218ENST00000489544 PZPP20742 1482 aa12.35□□□□□ -0.43
SF1-218ENST00000489544 ZC3H13Q5T200 1668 aaKnown RBP12.35□□□□□ -0.43
SF1-218ENST00000489544 IQGAP3Q86VI3 1631 aa12.34□□□□□ -0.43
SF1-218ENST00000489544 EFCAB6Q5THR3 1501 aa12.33□□□□□ -0.44
SF1-218ENST00000489544 SLC4A1APQ9BWU0 796 aaKnown RBP12.33□□□□□ -0.44
SF1-218ENST00000489544 ARHGAP31Q2M1Z3 1444 aa12.32□□□□□ -0.44
SF1-218ENST00000489544 PKD2Q13563 968 aa12.32□□□□□ -0.44
SF1-218ENST00000489544 CFAP65Q6ZU64 1925 aaKnown RBP12.32□□□□□ -0.44
SF1-218ENST00000489544 ERVK-7P63135 1459 aa12.32□□□□□ -0.44
SF1-218ENST00000489544 TET3O43151 1660 aa12.32□□□□□ -0.44
SF1-218ENST00000489544 TNRQ92752 1358 aa12.31□□□□□ -0.44
SF1-218ENST00000489544 MPHOSPH9Q99550 1183 aa12.31□□□□□ -0.44
SF1-218ENST00000489544 E9PCH4 1651 aa12.3□□□□□ -0.44
SF1-218ENST00000489544 HSPA2P54652 639 aa12.29□□□□□ -0.44
SF1-218ENST00000489544 SPATA31D1Q6ZQQ2 1576 aa12.29□□□□□ -0.44
SF1-218ENST00000489544 PREX1Q8TCU6 1659 aa12.29□□□□□ -0.44
SF1-218ENST00000489544 HRCP23327 699 aa12.28□□□□□ -0.44
SF1-218ENST00000489544 NOS1P29475 1434 aa12.28□□□□□ -0.44
SF1-218ENST00000489544 LMTK3Q96Q04 1460 aa12.27□□□□□ -0.44
SF1-218ENST00000489544 SYNMO15061 1565 aa12.27□□□□□ -0.44
SF1-218ENST00000489544 UGGT1Q9NYU2 1555 aa12.27□□□□□ -0.44
SF1-218ENST00000489544 UHRF1BP1Q6BDS2 1440 aa12.27□□□□□ -0.45
SF1-218ENST00000489544 RPRD2Q5VT52 1461 aaKnown RBP12.27□□□□□ -0.45
SF1-218ENST00000489544 IDI1Q13907 227 aa12.26□□□□□ -0.45
SF1-218ENST00000489544 PLA2R1Q13018 1463 aa12.26□□□□□ -0.45
SF1-218ENST00000489544 MYO3AQ8NEV4 1616 aa12.26□□□□□ -0.45
SF1-218ENST00000489544 SETD1BQ9UPS6 1966 aaKnown RBP12.23□□□□□ -0.45
SF1-218ENST00000489544 CEP170BQ9Y4F5 1589 aaPredicted RBP12.23□□□□□ -0.45
SF1-218ENST00000489544 PTPRTO14522 1441 aa12.23□□□□□ -0.45
SF1-218ENST00000489544 A2ML1A8K2U0 1454 aa12.22□□□□□ -0.45
SF1-218ENST00000489544 NLRP1Q9C000 1473 aa12.22□□□□□ -0.45
SF1-218ENST00000489544 ACIN1Q9UKV3 1341 aaKnown RBP12.22□□□□□ -0.45
SF1-218ENST00000489544 CHGAP10645 457 aaKnown RBP12.22□□□□□ -0.45
SF1-218ENST00000489544 SPHKAPQ2M3C7 1700 aa12.21□□□□□ -0.45
SF1-218ENST00000489544 SLC52A1Q9NWF4 448 aa12.21□□□□□ -0.45
SF1-218ENST00000489544 PIK3C2BO00750 1634 aa12.21□□□□□ -0.46
SF1-218ENST00000489544 STAG3Q9UJ98 1225 aa12.2□□□□□ -0.46
SF1-218ENST00000489544 TRPM2O94759 1503 aa12.2□□□□□ -0.46
SF1-218ENST00000489544 DHX57Q6P158 1386 aaKnown RBP12.19□□□□□ -0.46
SF1-218ENST00000489544 CLTCL1P53675 1640 aa12.19□□□□□ -0.46
SF1-218ENST00000489544 ZNF142P52746 1687 aaPredicted RBP12.19□□□□□ -0.46
SF1-218ENST00000489544 ANKRD30BQ9BXX2 1392 aa12.18□□□□□ -0.46
SF1-218ENST00000489544 NCKAP5LQ9HCH0 1330 aa12.18□□□□□ -0.46
SF1-218ENST00000489544 THEMISQ8N1K5 641 aaPredicted RBP12.17□□□□□ -0.46
SF1-218ENST00000489544 UBR1Q8IWV7 1749 aa12.17□□□□□ -0.46
SF1-218ENST00000489544 ADGRB3O60242 1522 aa12.16□□□□□ -0.46
SF1-218ENST00000489544 NUTM2DQ5VT03 806 aaPredicted RBP12.16□□□□□ -0.46
SF1-218ENST00000489544 CCDC144AA2RUR9 1427 aa12.16□□□□□ -0.46
SF1-218ENST00000489544 LTKP29376 864 aa12.15□□□□□ -0.46
SF1-218ENST00000489544 RGL3Q3MIN7 710 aa12.15□□□□□ -0.46
SF1-218ENST00000489544 TMEM131LA2VDJ0 1609 aa12.15□□□□□ -0.47
SF1-218ENST00000489544 ZNF326Q5BKZ1 582 aaKnown RBP12.14□□□□□ -0.47
SF1-218ENST00000489544 SIN3AQ96ST3 1273 aa12.14□□□□□ -0.47
SF1-218ENST00000489544 TMEM2Q9UHN6 1383 aa12.14□□□□□ -0.47
SF1-218ENST00000489544 MYO5BQ9ULV0 1848 aa12.14□□□□□ -0.47
SF1-218ENST00000489544 TXNDC2Q86VQ3 553 aa12.13□□□□□ -0.47
SF1-218ENST00000489544 ANKLE2Q86XL3 938 aa12.12□□□□□ -0.47
SF1-218ENST00000489544 FBXO41Q8TF61 875 aa12.12□□□□□ -0.47
SF1-218ENST00000489544 ARHGAP23Q9P227 1491 aa12.12□□□□□ -0.47
SF1-218ENST00000489544 STRCQ7RTU9 1775 aa12.12□□□□□ -0.47
SF1-218ENST00000489544 RIMS2Q9UQ26 1411 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms