RNA–Protein interactions for RNA: ENST00000489319.5

PDE9A-224, Transcript of phosphodiesterase 9A, humanhuman

TSL 2

Gene PDE9A, Length 3,412 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE9A-224ENST00000489319 TRAPPC8Q9Y2L5 1435 aa17.15■□□□□ 0.34
PDE9A-224ENST00000489319 CDK11AQ9UQ88 783 aaPredicted RBP17.15■□□□□ 0.34
PDE9A-224ENST00000489319 E9PCH4 1651 aa17.14■□□□□ 0.33
PDE9A-224ENST00000489319 SPHKAPQ2M3C7 1700 aa17.14■□□□□ 0.33
PDE9A-224ENST00000489319 MYO3AQ8NEV4 1616 aa17.12■□□□□ 0.33
PDE9A-224ENST00000489319 P3H3Q8IVL6 736 aa17.11■□□□□ 0.33
PDE9A-224ENST00000489319 CLTCQ00610 1675 aaKnown RBP17.11■□□□□ 0.33
PDE9A-224ENST00000489319 SETD1AO15047 1707 aaKnown RBP17.11■□□□□ 0.33
PDE9A-224ENST00000489319 ABCC3O15438 1527 aa17.1■□□□□ 0.33
PDE9A-224ENST00000489319 NPATQ14207 1427 aa17.09■□□□□ 0.33
PDE9A-224ENST00000489319 POLR1AO95602 1720 aaPredicted RBP17.09■□□□□ 0.33
PDE9A-224ENST00000489319 HFM1A2PYH4 1435 aa17.09■□□□□ 0.33
PDE9A-224ENST00000489319 PLEKHD1A6NEE1 506 aa17.08■□□□□ 0.33
PDE9A-224ENST00000489319 PRAG1Q86YV5 1406 aa17.07■□□□□ 0.32
PDE9A-224ENST00000489319 UGGT1Q9NYU2 1555 aa17.07■□□□□ 0.32
PDE9A-224ENST00000489319 UBR1Q8IWV7 1749 aa17.07■□□□□ 0.32
PDE9A-224ENST00000489319 NCOA1Q15788 1441 aa17.07■□□□□ 0.32
PDE9A-224ENST00000489319 PPP6R1Q9UPN7 881 aa17.06■□□□□ 0.32
PDE9A-224ENST00000489319 A2MP01023 1474 aa17.06■□□□□ 0.32
PDE9A-224ENST00000489319 CNTLNQ9NXG0 1405 aa17.05■□□□□ 0.32
PDE9A-224ENST00000489319 PTPRKQ15262 1439 aa17.05■□□□□ 0.32
PDE9A-224ENST00000489319 CCNB3Q8WWL7 1395 aa17.05■□□□□ 0.32
PDE9A-224ENST00000489319 SCAPERQ9BY12 1400 aa17.04■□□□□ 0.32
PDE9A-224ENST00000489319 MTUS2Q5JR59 1369 aa17.03■□□□□ 0.32
PDE9A-224ENST00000489319 RIMS1Q86UR5 1692 aaKnown RBP17.03■□□□□ 0.32
PDE9A-224ENST00000489319 SYNMO15061 1565 aa17.02■□□□□ 0.32
PDE9A-224ENST00000489319 KIAA1210Q9ULL0 1709 aa17.02■□□□□ 0.31
PDE9A-224ENST00000489319 NPM1P06748 294 aaKnown RBP eCLIP17.02■□□□□ 0.31
PDE9A-224ENST00000489319 DHX29Q7Z478 1369 aaKnown RBP17.01■□□□□ 0.31
PDE9A-224ENST00000489319 PZPP20742 1482 aa17.01■□□□□ 0.31
PDE9A-224ENST00000489319 TRPM2O94759 1503 aa17■□□□□ 0.31
PDE9A-224ENST00000489319 PTPRTO14522 1441 aa16.99■□□□□ 0.31
PDE9A-224ENST00000489319 YEATS2Q9ULM3 1422 aa16.97■□□□□ 0.31
PDE9A-224ENST00000489319 PPLO60437 1756 aa16.97■□□□□ 0.31
PDE9A-224ENST00000489319 KNDC1Q76NI1 1749 aa16.97■□□□□ 0.31
PDE9A-224ENST00000489319 TMEM131LA2VDJ0 1609 aa16.97■□□□□ 0.31
PDE9A-224ENST00000489319 STRCQ7RTU9 1775 aa16.96■□□□□ 0.31
PDE9A-224ENST00000489319 EFCAB2Q5VUJ9 269 aa16.96■□□□□ 0.31
PDE9A-224ENST00000489319 SLIT1O75093 1534 aa16.96■□□□□ 0.3
PDE9A-224ENST00000489319 LMTK3Q96Q04 1460 aa16.94■□□□□ 0.3
PDE9A-224ENST00000489319 NOS1P29475 1434 aa16.94■□□□□ 0.3
PDE9A-224ENST00000489319 HIRIP3Q9BW71 556 aaPredicted RBP16.94■□□□□ 0.3
PDE9A-224ENST00000489319 LAMC1P11047 1609 aa16.94■□□□□ 0.3
PDE9A-224ENST00000489319 NAIPQ13075 1403 aa16.93■□□□□ 0.3
PDE9A-224ENST00000489319 FAM69CQ0P6D2 419 aa16.93■□□□□ 0.3
PDE9A-224ENST00000489319 FAM50AQ14320 339 aaKnown RBP16.93■□□□□ 0.3
PDE9A-224ENST00000489319 NWD1Q149M9 1564 aa16.92■□□□□ 0.3
PDE9A-224ENST00000489319 ARHGAP23Q9P227 1491 aa16.91■□□□□ 0.3
PDE9A-224ENST00000489319 DIP2AQ14689 1571 aa16.91■□□□□ 0.3
PDE9A-224ENST00000489319 PLA2R1Q13018 1463 aa16.91■□□□□ 0.3
PDE9A-224ENST00000489319 ADGRB3O60242 1522 aa16.91■□□□□ 0.3
PDE9A-224ENST00000489319 MED14O60244 1454 aa16.88■□□□□ 0.29
PDE9A-224ENST00000489319 NRXN1Q9ULB1 1477 aa16.87■□□□□ 0.29
PDE9A-224ENST00000489319 KIF1BO60333 1816 aa16.87■□□□□ 0.29
PDE9A-224ENST00000489319 NRXN3Q9Y4C0 1643 aa16.87■□□□□ 0.29
PDE9A-224ENST00000489319 SETD1BQ9UPS6 1966 aaKnown RBP16.87■□□□□ 0.29
PDE9A-224ENST00000489319 MYT1Q01538 1121 aa16.86■□□□□ 0.29
PDE9A-224ENST00000489319 KCNH8Q96L42 1107 aa16.86■□□□□ 0.29
PDE9A-224ENST00000489319 MYO5BQ9ULV0 1848 aa16.86■□□□□ 0.29
PDE9A-224ENST00000489319 NLRP1Q9C000 1473 aa16.84■□□□□ 0.29
PDE9A-224ENST00000489319 CEP170BQ9Y4F5 1589 aaPredicted RBP16.83■□□□□ 0.28
PDE9A-224ENST00000489319 CLTCL1P53675 1640 aa16.83■□□□□ 0.28
PDE9A-224ENST00000489319 SIN3AQ96ST3 1273 aa16.82■□□□□ 0.28
PDE9A-224ENST00000489319 SETBP1Q9Y6X0 1596 aa16.82■□□□□ 0.28
PDE9A-224ENST00000489319 DHX57Q6P158 1386 aaKnown RBP16.82■□□□□ 0.28
PDE9A-224ENST00000489319 PTPRMP28827 1452 aa16.82■□□□□ 0.28
PDE9A-224ENST00000489319 ERVK-7P63135 1459 aa16.82■□□□□ 0.28
PDE9A-224ENST00000489319 IQSEC2Q5JU85 1478 aa16.79■□□□□ 0.28
PDE9A-224ENST00000489319 XRN1Q8IZH2 1706 aaKnown RBP16.78■□□□□ 0.28
PDE9A-224ENST00000489319 BCANQ96GW7 911 aa16.77■□□□□ 0.28
PDE9A-224ENST00000489319 ANKRD30AQ9BXX3 1397 aa16.77■□□□□ 0.28
PDE9A-224ENST00000489319 ARID3CA6NKF2 412 aa16.77■□□□□ 0.27
PDE9A-224ENST00000489319 XIRP1Q702N8 1843 aaKnown RBP16.76■□□□□ 0.27
PDE9A-224ENST00000489319 ZFYVE9O95405 1425 aa16.75■□□□□ 0.27
PDE9A-224ENST00000489319 A2ML1A8K2U0 1454 aa16.74■□□□□ 0.27
PDE9A-224ENST00000489319 DDX10Q13206 875 aaKnown RBP16.74■□□□□ 0.27
PDE9A-224ENST00000489319 CHD2O14647 1828 aaKnown RBP16.74■□□□□ 0.27
PDE9A-224ENST00000489319 NEXMIFQ5QGS0 1516 aa16.73■□□□□ 0.27
PDE9A-224ENST00000489319 MYOM2P54296 1465 aa16.71■□□□□ 0.27
PDE9A-224ENST00000489319 IQGAP1P46940 1657 aa16.71■□□□□ 0.27
PDE9A-224ENST00000489319 ANKRD50Q9ULJ7 1429 aa16.7■□□□□ 0.26
PDE9A-224ENST00000489319 KIF15Q9NS87 1388 aa16.69■□□□□ 0.26
PDE9A-224ENST00000489319 ALKQ9UM73 1620 aa16.69■□□□□ 0.26
PDE9A-224ENST00000489319 CFDP1Q9UEE9 299 aaPredicted RBP16.69■□□□□ 0.26
PDE9A-224ENST00000489319 USP54Q70EL1 1684 aa16.68■□□□□ 0.26
PDE9A-224ENST00000489319 RAB3GAP2Q9H2M9 1393 aa16.67■□□□□ 0.26
PDE9A-224ENST00000489319 STRCP1A6NGW2 1772 aa16.66■□□□□ 0.26
PDE9A-224ENST00000489319 ADGRB2O60241 1585 aa16.64■□□□□ 0.25
PDE9A-224ENST00000489319 ZNF644Q9H582 1327 aaPredicted RBP16.62■□□□□ 0.25
PDE9A-224ENST00000489319 SPAG9O60271 1321 aaKnown RBP16.62■□□□□ 0.25
PDE9A-224ENST00000489319 SPATA31E1Q6ZUB1 1445 aa16.62■□□□□ 0.25
PDE9A-224ENST00000489319 TRPM1Q7Z4N2 1603 aa16.6■□□□□ 0.25
PDE9A-224ENST00000489319 CNGB1Q14028 1251 aaPredicted RBP16.6■□□□□ 0.25
PDE9A-224ENST00000489319 TRIM52Q96A61 297 aa16.6■□□□□ 0.25
PDE9A-224ENST00000489319 SETD5Q9C0A6 1442 aa16.59■□□□□ 0.25
PDE9A-224ENST00000489319 CPS1P31327 1500 aa16.58■□□□□ 0.25
PDE9A-224ENST00000489319 SUPT16HQ9Y5B9 1047 aaKnown RBP16.58■□□□□ 0.24
PDE9A-224ENST00000489319 LTBP4Q8N2S1 1624 aa16.57■□□□□ 0.24
PDE9A-224ENST00000489319 CHIC2Q9UKJ5 165 aa16.57■□□□□ 0.24
PDE9A-224ENST00000489319 DLC1Q96QB1 1528 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms