RNA–Protein interactions for RNA: ENST00000489178.1

ALCAM-208, Transcript of activated leukocyte cell adhesion molecule, humanhuman

TSL 2

Gene ALCAM, Length 783 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALCAM-208ENST00000489178 PTPREP23469 700 aa12.71□□□□□ -0.37
ALCAM-208ENST00000489178 BCANQ96GW7 911 aa12.71□□□□□ -0.37
ALCAM-208ENST00000489178 TSR1Q2NL82 804 aaKnown RBP12.7□□□□□ -0.38
ALCAM-208ENST00000489178 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.7□□□□□ -0.38
ALCAM-208ENST00000489178 RBM33Q96EV2 1170 aaKnown RBP12.7□□□□□ -0.38
ALCAM-208ENST00000489178 AXIN2Q9Y2T1 843 aa12.7□□□□□ -0.38
ALCAM-208ENST00000489178 PSEN2P49810 448 aa12.69□□□□□ -0.38
ALCAM-208ENST00000489178 MAP3K7O43318 606 aa12.68□□□□□ -0.38
ALCAM-208ENST00000489178 NPDC1Q9NQX5 325 aaPredicted RBP12.68□□□□□ -0.38
ALCAM-208ENST00000489178 COL9A1P20849 921 aa12.67□□□□□ -0.38
ALCAM-208ENST00000489178 RBM26Q5T8P6 1007 aaKnown RBP12.67□□□□□ -0.38
ALCAM-208ENST00000489178 SLC4A5Q9BY07 1137 aa12.67□□□□□ -0.38
ALCAM-208ENST00000489178 PPP1R3GB7ZBB8 358 aa12.66□□□□□ -0.38
ALCAM-208ENST00000489178 DMRTA1Q5VZB9 504 aa12.66□□□□□ -0.38
ALCAM-208ENST00000489178 KCNK17Q96T54 332 aa12.66□□□□□ -0.38
ALCAM-208ENST00000489178 CDHR5Q9HBB8 845 aa12.65□□□□□ -0.38
ALCAM-208ENST00000489178 LSM11P83369 360 aaKnown RBP eCLIP12.64□□□□□ -0.39
ALCAM-208ENST00000489178 ZBED2Q9BTP6 218 aa12.64□□□□□ -0.39
ALCAM-208ENST00000489178 CERKQ8TCT0 537 aa12.63□□□□□ -0.39
ALCAM-208ENST00000489178 TK2O00142 265 aa12.61□□□□□ -0.39
ALCAM-208ENST00000489178 TULP1O00294 542 aaPredicted RBP12.61□□□□□ -0.39
ALCAM-208ENST00000489178 GPR37O15354 613 aa12.61□□□□□ -0.39
ALCAM-208ENST00000489178 PTGDRQ13258 359 aa12.61□□□□□ -0.39
ALCAM-208ENST00000489178 KCNH8Q96L42 1107 aa12.61□□□□□ -0.39
ALCAM-208ENST00000489178 ONECUT3O60422 494 aaPredicted RBP12.59□□□□□ -0.39
ALCAM-208ENST00000489178 LMOD2Q6P5Q4 547 aa12.59□□□□□ -0.39
ALCAM-208ENST00000489178 VPS9D1Q9Y2B5 631 aa12.58□□□□□ -0.4
ALCAM-208ENST00000489178 NUTM2FA1L443 756 aa12.57□□□□□ -0.4
ALCAM-208ENST00000489178 TTC13Q8NBP0 860 aa12.57□□□□□ -0.4
ALCAM-208ENST00000489178 RBM27Q9P2N5 1060 aaKnown RBP12.57□□□□□ -0.4
ALCAM-208ENST00000489178 ADGRD1Q6QNK2 874 aa12.56□□□□□ -0.4
ALCAM-208ENST00000489178 HRO43593 1189 aa12.55□□□□□ -0.4
ALCAM-208ENST00000489178 PRSS12P56730 875 aa12.55□□□□□ -0.4
ALCAM-208ENST00000489178 FCHSD2O94868 740 aa12.54□□□□□ -0.4
ALCAM-208ENST00000489178 PROX2Q3B8N5 592 aa12.54□□□□□ -0.4
ALCAM-208ENST00000489178 GPIHBP1Q8IV16 184 aa12.54□□□□□ -0.4
ALCAM-208ENST00000489178 CDCA7LQ96GN5 454 aa12.54□□□□□ -0.4
ALCAM-208ENST00000489178 TRIM6-TRIM34B2RNG4 842 aa12.53□□□□□ -0.4
ALCAM-208ENST00000489178 BHMG1C9JSJ3 638 aaPredicted RBP12.53□□□□□ -0.4
ALCAM-208ENST00000489178 ANKRD13DQ6ZTN6 518 aa12.53□□□□□ -0.4
ALCAM-208ENST00000489178 FAM198AQ9UFP1 575 aa12.53□□□□□ -0.4
ALCAM-208ENST00000489178 TSKSQ9UJT2 592 aa12.53□□□□□ -0.4
ALCAM-208ENST00000489178 HIC1Q14526 733 aa12.52□□□□□ -0.41
ALCAM-208ENST00000489178 RABGEF1Q9UJ41 708 aa12.51□□□□□ -0.41
ALCAM-208ENST00000489178 GNPATO15228 680 aa12.49□□□□□ -0.41
ALCAM-208ENST00000489178 PADI6Q6TGC4 694 aa12.48□□□□□ -0.41
ALCAM-208ENST00000489178 ZC3H15Q8WU90 426 aaKnown RBP12.47□□□□□ -0.41
ALCAM-208ENST00000489178 KIAA1468Q9P260 1216 aa12.47□□□□□ -0.41
ALCAM-208ENST00000489178 SPNS2Q8IVW8 549 aa12.46□□□□□ -0.41
ALCAM-208ENST00000489178 C3orf80F5H4A9 247 aa12.45□□□□□ -0.42
ALCAM-208ENST00000489178 FECHP22830 423 aa12.45□□□□□ -0.42
ALCAM-208ENST00000489178 ZMYND10O75800 440 aa12.44□□□□□ -0.42
ALCAM-208ENST00000489178 PACS2Q86VP3 889 aa12.44□□□□□ -0.42
ALCAM-208ENST00000489178 BARGINQ6ZT62 677 aa12.41□□□□□ -0.42
ALCAM-208ENST00000489178 LAPTM4BQ86VI4 370 aa12.4□□□□□ -0.42
ALCAM-208ENST00000489178 TATDN2Q93075 761 aa12.4□□□□□ -0.42
ALCAM-208ENST00000489178 NBPF3Q9H094 633 aa12.4□□□□□ -0.42
ALCAM-208ENST00000489178 ADGRG1Q9Y653 693 aa12.4□□□□□ -0.42
ALCAM-208ENST00000489178 EYA1Q99502 592 aa12.39□□□□□ -0.43
ALCAM-208ENST00000489178 NBPF26B4DH59 902 aa12.37□□□□□ -0.43
ALCAM-208ENST00000489178 PRKCSHP14314 528 aaPredicted RBP12.37□□□□□ -0.43
ALCAM-208ENST00000489178 MAP2K5Q13163 448 aa12.37□□□□□ -0.43
ALCAM-208ENST00000489178 NUDT18Q6ZVK8 323 aa12.37□□□□□ -0.43
ALCAM-208ENST00000489178 PNMA3Q9UL41 463 aa12.37□□□□□ -0.43
ALCAM-208ENST00000489178 MRPL50Q8N5N7 158 aaKnown RBP12.36□□□□□ -0.43
ALCAM-208ENST00000489178 MINK1Q8N4C8 1332 aaPredicted RBP12.36□□□□□ -0.43
ALCAM-208ENST00000489178 FAM98CQ17RN3 349 aaKnown RBP12.35□□□□□ -0.43
ALCAM-208ENST00000489178 SEPT9Q9UHD8 586 aaPredicted RBP12.35□□□□□ -0.43
ALCAM-208ENST00000489178 SMAPO00193 183 aa12.34□□□□□ -0.43
ALCAM-208ENST00000489178 IRF6O14896 467 aa12.34□□□□□ -0.43
ALCAM-208ENST00000489178 OATP04181 439 aa12.33□□□□□ -0.44
ALCAM-208ENST00000489178 FAM161AQ3B820 660 aa12.33□□□□□ -0.44
ALCAM-208ENST00000489178 PXYLP1Q8TE99 480 aa12.33□□□□□ -0.44
ALCAM-208ENST00000489178 MYT1LQ9UL68 1186 aa12.33□□□□□ -0.44
ALCAM-208ENST00000489178 MMRN1Q13201 1228 aa12.32□□□□□ -0.44
ALCAM-208ENST00000489178 TPRNQ4KMQ1 711 aa12.31□□□□□ -0.44
ALCAM-208ENST00000489178 METTL3Q86U44 580 aaKnown RBP12.31□□□□□ -0.44
ALCAM-208ENST00000489178 RBM46Q8TBY0 533 aaKnown RBP12.31□□□□□ -0.44
ALCAM-208ENST00000489178 ZFRQ96KR1 1074 aaKnown RBP12.31□□□□□ -0.44
ALCAM-208ENST00000489178 STAC3Q96MF2 364 aa12.3□□□□□ -0.44
ALCAM-208ENST00000489178 PHOX2BQ99453 314 aa12.28□□□□□ -0.44
ALCAM-208ENST00000489178 CCDC102AQ96A19 550 aa12.27□□□□□ -0.45
ALCAM-208ENST00000489178 RCCD1A6NED2 376 aa12.26□□□□□ -0.45
ALCAM-208ENST00000489178 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.25□□□□□ -0.45
ALCAM-208ENST00000489178 DNAJB2P25686 324 aa12.25□□□□□ -0.45
ALCAM-208ENST00000489178 RNF166Q96A37 237 aaPredicted RBP12.24□□□□□ -0.45
ALCAM-208ENST00000489178 TMEM134Q9H6X4 195 aa12.24□□□□□ -0.45
ALCAM-208ENST00000489178 SOWAHBA6NEL2 793 aa12.23□□□□□ -0.45
ALCAM-208ENST00000489178 GOLGA8CPA6NN73 597 aa12.23□□□□□ -0.45
ALCAM-208ENST00000489178 KRI1Q8N9T8 703 aaKnown RBP12.23□□□□□ -0.45
ALCAM-208ENST00000489178 WNT2BQ93097 391 aa12.23□□□□□ -0.45
ALCAM-208ENST00000489178 THSD4Q6ZMP0 1018 aa12.22□□□□□ -0.45
ALCAM-208ENST00000489178 SAMD7Q7Z3H4 446 aa12.21□□□□□ -0.45
ALCAM-208ENST00000489178 ANKK1Q8NFD2 765 aa12.21□□□□□ -0.45
ALCAM-208ENST00000489178 KCTD12Q96CX2 325 aaKnown RBP12.21□□□□□ -0.45
ALCAM-208ENST00000489178 AK7Q96M32 723 aa12.2□□□□□ -0.46
ALCAM-208ENST00000489178 SLC24A3Q9HC58 644 aa12.2□□□□□ -0.46
ALCAM-208ENST00000489178 SWT1Q5T5J6 900 aaKnown RBP12.19□□□□□ -0.46
ALCAM-208ENST00000489178 TMUB1Q9BVT8 246 aa12.18□□□□□ -0.46
ALCAM-208ENST00000489178 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms