RNA–Protein interactions for RNA: ENST00000488934.1

SF3A3-207, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 5

Gene SF3A3, Length 273 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-207ENST00000488934 EVI5O60447 810 aa9.06□□□□□ -0.96
SF3A3-207ENST00000488934 PBX2P40425 430 aa9.06□□□□□ -0.96
SF3A3-207ENST00000488934 POTEBQ6S5H4 581 aa9.06□□□□□ -0.96
SF3A3-207ENST00000488934 KCNH8Q96L42 1107 aa9.06□□□□□ -0.96
SF3A3-207ENST00000488934 EMILIN3Q9NT22 766 aa9.06□□□□□ -0.96
SF3A3-207ENST00000488934 KDM4FA0A1W2PPD8 638 aa9.05□□□□□ -0.96
SF3A3-207ENST00000488934 URB2Q14146 1524 aaKnown RBP9.05□□□□□ -0.96
SF3A3-207ENST00000488934 DNMBPQ6XZF7 1577 aa9.03□□□□□ -0.96
SF3A3-207ENST00000488934 DPYSL4O14531 572 aa9.02□□□□□ -0.97
SF3A3-207ENST00000488934 HAP1P54257 671 aaPredicted RBP9.02□□□□□ -0.97
SF3A3-207ENST00000488934 ANO8Q9HCE9 1232 aaPredicted RBP9.02□□□□□ -0.97
SF3A3-207ENST00000488934 TOPBP1Q92547 1522 aa9.01□□□□□ -0.97
SF3A3-207ENST00000488934 ZNF454Q8N9F8 522 aa9.01□□□□□ -0.97
SF3A3-207ENST00000488934 JPH4Q96JJ6 628 aa9.01□□□□□ -0.97
SF3A3-207ENST00000488934 SPDYE16A6NNV3 312 aaPredicted RBP9□□□□□ -0.97
SF3A3-207ENST00000488934 PLSCR2Q9NRY7 297 aa9□□□□□ -0.97
SF3A3-207ENST00000488934 P3H3Q8IVL6 736 aa8.99□□□□□ -0.97
SF3A3-207ENST00000488934 KRTAP3-3Q9BYR6 98 aa8.99□□□□□ -0.97
SF3A3-207ENST00000488934 KRTAP3-2Q9BYR7 98 aa8.99□□□□□ -0.97
SF3A3-207ENST00000488934 ARIH1Q9Y4X5 557 aaPredicted RBP8.99□□□□□ -0.97
SF3A3-207ENST00000488934 IFT140Q96RY7 1462 aa8.99□□□□□ -0.97
SF3A3-207ENST00000488934 FOSBP53539 338 aa8.98□□□□□ -0.97
SF3A3-207ENST00000488934 ARHGAP33O14559 1287 aa8.97□□□□□ -0.97
SF3A3-207ENST00000488934 PTGER2P43116 358 aa8.96□□□□□ -0.98
SF3A3-207ENST00000488934 PDIA6Q15084 440 aa8.96□□□□□ -0.98
SF3A3-207ENST00000488934 FBXW7Q969H0 707 aa8.96□□□□□ -0.98
SF3A3-207ENST00000488934 ZDHHC16Q969W1 377 aa8.96□□□□□ -0.98
SF3A3-207ENST00000488934 PHF14O94880 888 aa8.95□□□□□ -0.98
SF3A3-207ENST00000488934 LSM11P83369 360 aaKnown RBP eCLIP8.95□□□□□ -0.98
SF3A3-207ENST00000488934 EPAS1Q99814 870 aa8.95□□□□□ -0.98
SF3A3-207ENST00000488934 WDR97A6NE52 1622 aa8.94□□□□□ -0.98
SF3A3-207ENST00000488934 ARHGEF1Q92888 912 aaKnown RBP8.94□□□□□ -0.98
SF3A3-207ENST00000488934 BCL2L12Q9HB09 334 aa8.94□□□□□ -0.98
SF3A3-207ENST00000488934 PTPREP23469 700 aa8.93□□□□□ -0.98
SF3A3-207ENST00000488934 TYW1BQ6NUM6 668 aa8.93□□□□□ -0.98
SF3A3-207ENST00000488934 ANKRD13DQ6ZTN6 518 aa8.93□□□□□ -0.98
SF3A3-207ENST00000488934 SPNS2Q8IVW8 549 aa8.93□□□□□ -0.98
SF3A3-207ENST00000488934 POLA1P09884 1462 aaPredicted RBP8.93□□□□□ -0.98
SF3A3-207ENST00000488934 TARBP1Q13395 1621 aaKnown RBP8.92□□□□□ -0.98
SF3A3-207ENST00000488934 EIF4G3O43432 1585 aaKnown RBP8.92□□□□□ -0.98
SF3A3-207ENST00000488934 KCNK17Q96T54 332 aa8.92□□□□□ -0.98
SF3A3-207ENST00000488934 CUX1P39880 1505 aa8.91□□□□□ -0.98
SF3A3-207ENST00000488934 AXIN2Q9Y2T1 843 aa8.91□□□□□ -0.98
SF3A3-207ENST00000488934 FGD5Q6ZNL6 1462 aa8.9□□□□□ -0.98
SF3A3-207ENST00000488934 PCDHGA10Q9Y5H3 936 aa8.9□□□□□ -0.98
SF3A3-207ENST00000488934 TK2O00142 265 aa8.89□□□□□ -0.99
SF3A3-207ENST00000488934 DDX12PQ92771 950 aa8.89□□□□□ -0.99
SF3A3-207ENST00000488934 BIVM-ERCC5R4GMW8 1640 aa8.89□□□□□ -0.99
SF3A3-207ENST00000488934 SOGA1O94964 1423 aa8.88□□□□□ -0.99
SF3A3-207ENST00000488934 TOP2BQ02880 1626 aa8.88□□□□□ -0.99
SF3A3-207ENST00000488934 PSEN2P49810 448 aa8.88□□□□□ -0.99
SF3A3-207ENST00000488934 POTEEQ6S8J3 1075 aa8.88□□□□□ -0.99
SF3A3-207ENST00000488934 VSIG10Q8N0Z9 540 aa8.88□□□□□ -0.99
SF3A3-207ENST00000488934 KCNV2Q8TDN2 545 aa8.88□□□□□ -0.99
SF3A3-207ENST00000488934 STAC3Q96MF2 364 aa8.88□□□□□ -0.99
SF3A3-207ENST00000488934 ADAM33Q9BZ11 813 aa8.88□□□□□ -0.99
SF3A3-207ENST00000488934 ZNF608Q9ULD9 1512 aaPredicted RBP8.88□□□□□ -0.99
SF3A3-207ENST00000488934 WRNQ14191 1432 aaPredicted RBP eCLIP8.88□□□□□ -0.99
SF3A3-207ENST00000488934 NBR1Q14596 966 aa8.87□□□□□ -0.99
SF3A3-207ENST00000488934 ADGRD1Q6QNK2 874 aa8.86□□□□□ -0.99
SF3A3-207ENST00000488934 RAD54L2Q9Y4B4 1467 aa8.85□□□□□ -0.99
SF3A3-207ENST00000488934 MMRN1Q13201 1228 aa8.85□□□□□ -0.99
SF3A3-207ENST00000488934 SLC4A5Q9BY07 1137 aa8.85□□□□□ -0.99
SF3A3-207ENST00000488934 MYT1LQ9UL68 1186 aa8.85□□□□□ -0.99
SF3A3-207ENST00000488934 GRXCR2A6NFK2 248 aa8.84□□□□□ -0.99
SF3A3-207ENST00000488934 PPP1R3GB7ZBB8 358 aa8.84□□□□□ -0.99
SF3A3-207ENST00000488934 MAP3K7O43318 606 aa8.84□□□□□ -0.99
SF3A3-207ENST00000488934 DMRTA1Q5VZB9 504 aa8.84□□□□□ -0.99
SF3A3-207ENST00000488934 PBRM1Q86U86 1689 aa8.84□□□□□ -0.99
SF3A3-207ENST00000488934 SYNJ1O43426 1573 aa8.83□□□□□ -1
SF3A3-207ENST00000488934 EN1Q05925 392 aaPredicted RBP8.83□□□□□ -1
SF3A3-207ENST00000488934 RBM33Q96EV2 1170 aaKnown RBP8.83□□□□□ -1
SF3A3-207ENST00000488934 ABCA10Q8WWZ4 1543 aa8.83□□□□□ -1
SF3A3-207ENST00000488934 AQRO60306 1485 aaKnown RBP eCLIP8.83□□□□□ -11e-10■■■■■ 28.9
SF3A3-207ENST00000488934 MAGI1Q96QZ7 1491 aaPredicted RBP8.83□□□□□ -1
SF3A3-207ENST00000488934 CHD1O14646 1710 aa8.83□□□□□ -1
SF3A3-207ENST00000488934 RNF166Q96A37 237 aaPredicted RBP8.82□□□□□ -1
SF3A3-207ENST00000488934 GRIN2BQ13224 1484 aa8.82□□□□□ -1
SF3A3-207ENST00000488934 ABCA5Q8WWZ7 1642 aa8.81□□□□□ -1
SF3A3-207ENST00000488934 C6orf132Q5T0Z8 1188 aa8.81□□□□□ -1
SF3A3-207ENST00000488934 TDRD9Q8NDG6 1382 aaKnown RBP8.81□□□□□ -1
SF3A3-207ENST00000488934 CERKQ8TCT0 537 aa8.8□□□□□ -1
SF3A3-207ENST00000488934 ZBED2Q9BTP6 218 aa8.8□□□□□ -1
SF3A3-207ENST00000488934 VPS9D1Q9Y2B5 631 aa8.8□□□□□ -1
SF3A3-207ENST00000488934 GAPVD1Q14C86 1478 aa8.8□□□□□ -1
SF3A3-207ENST00000488934 SNAPC4Q5SXM2 1469 aa8.79□□□□□ -1
SF3A3-207ENST00000488934 NBPF3Q9H094 633 aa8.79□□□□□ -1
SF3A3-207ENST00000488934 KDM2AQ9Y2K7 1162 aa8.78□□□□□ -1
SF3A3-207ENST00000488934 SYNJ2O15056 1496 aa8.77□□□□□ -1
SF3A3-207ENST00000488934 HRO43593 1189 aa8.77□□□□□ -1.01
SF3A3-207ENST00000488934 ONECUT3O60422 494 aaPredicted RBP8.77□□□□□ -1.01
SF3A3-207ENST00000488934 SMYD5Q6GMV2 418 aa8.77□□□□□ -1.01
SF3A3-207ENST00000488934 GOLGA8CPA6NN73 597 aa8.76□□□□□ -1.01
SF3A3-207ENST00000488934 ERICH3Q5RHP9 1530 aa8.75□□□□□ -1.01
SF3A3-207ENST00000488934 COL9A1P20849 921 aa8.75□□□□□ -1.01
SF3A3-207ENST00000488934 OSBPP22059 807 aa8.75□□□□□ -1.01
SF3A3-207ENST00000488934 MRPL50Q8N5N7 158 aaKnown RBP8.75□□□□□ -1.01
SF3A3-207ENST00000488934 RABGEF1Q9UJ41 708 aa8.75□□□□□ -1.01
SF3A3-207ENST00000488934 TSR1Q2NL82 804 aaKnown RBP8.74□□□□□ -1.01
SF3A3-207ENST00000488934 CHMP7Q8WUX9 453 aaPredicted RBP8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms