RNA–Protein interactions for RNA: ENST00000488733.1

ATP1A1-208, Transcript of ATPase Na+/K+ transporting subunit alpha 1, humanhuman

TSL 2

Gene ATP1A1, Length 1,728 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1A1-208ENST00000488733 DIEXFQ68CQ4 756 aaKnown RBP28.96■■■□□ 2.23
ATP1A1-208ENST00000488733 DHX29Q7Z478 1369 aaKnown RBP28.94■■■□□ 2.22
ATP1A1-208ENST00000488733 ZMYM4Q5VZL5 1548 aa28.94■■■□□ 2.22
ATP1A1-208ENST00000488733 UNC13BO14795 1591 aa28.93■■■□□ 2.22
ATP1A1-208ENST00000488733 FOXD1Q16676 465 aa28.93■■■□□ 2.22
ATP1A1-208ENST00000488733 ABCA6Q8N139 1617 aa28.92■■■□□ 2.22
ATP1A1-208ENST00000488733 PKD2Q13563 968 aa28.91■■■□□ 2.22
ATP1A1-208ENST00000488733 A2MP01023 1474 aa28.9■■■□□ 2.22
ATP1A1-208ENST00000488733 RPRD2Q5VT52 1461 aaKnown RBP28.9■■■□□ 2.22
ATP1A1-208ENST00000488733 COL17A1Q9UMD9 1497 aaPredicted RBP28.89■■■□□ 2.21
ATP1A1-208ENST00000488733 MAGI2Q86UL8 1455 aa28.88■■■□□ 2.21
ATP1A1-208ENST00000488733 DIP2CQ9Y2E4 1556 aa28.88■■■□□ 2.21
ATP1A1-208ENST00000488733 EIF2AK4Q9P2K8 1649 aaKnown RBP28.87■■■□□ 2.21
ATP1A1-208ENST00000488733 YEATS2Q9ULM3 1422 aa28.85■■■□□ 2.21
ATP1A1-208ENST00000488733 FAM135AQ9P2D6 1515 aa28.85■■■□□ 2.21
ATP1A1-208ENST00000488733 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.84■■■□□ 2.21
ATP1A1-208ENST00000488733 KIF3BO15066 747 aa28.83■■■□□ 2.21
ATP1A1-208ENST00000488733 DEPDC5O75140 1603 aa28.82■■■□□ 2.2
ATP1A1-208ENST00000488733 IQGAP3Q86VI3 1631 aa28.81■■■□□ 2.2
ATP1A1-208ENST00000488733 L3MBTL2Q969R5 705 aa28.76■■■□□ 2.19
ATP1A1-208ENST00000488733 PRDM15P57071 1507 aaPredicted RBP28.75■■■□□ 2.19
ATP1A1-208ENST00000488733 BCORL1Q5H9F3 1711 aa28.74■■■□□ 2.19
ATP1A1-208ENST00000488733 RNF17Q9BXT8 1623 aaKnown RBP28.74■■■□□ 2.19
ATP1A1-208ENST00000488733 ATP10AO60312 1499 aa28.74■■■□□ 2.19
ATP1A1-208ENST00000488733 MROH1Q8NDA8 1641 aa28.74■■■□□ 2.19
ATP1A1-208ENST00000488733 KANK1Q14678 1352 aa28.73■■■□□ 2.19
ATP1A1-208ENST00000488733 ARHGEF40Q8TER5 1519 aa28.71■■■□□ 2.19
ATP1A1-208ENST00000488733 VWDEQ8N2E2 1590 aa28.71■■■□□ 2.19
ATP1A1-208ENST00000488733 REREQ9P2R6 1566 aa28.69■■■□□ 2.18
ATP1A1-208ENST00000488733 GGT6Q6P531 493 aa28.63■■■□□ 2.17
ATP1A1-208ENST00000488733 TET3O43151 1660 aa28.63■■■□□ 2.17
ATP1A1-208ENST00000488733 AGLP35573 1532 aa28.61■■■□□ 2.17
ATP1A1-208ENST00000488733 LMTK2Q8IWU2 1503 aa28.6■■■□□ 2.17
ATP1A1-208ENST00000488733 CCDC144AA2RUR9 1427 aa28.57■■■□□ 2.16
ATP1A1-208ENST00000488733 E9PCH4 1651 aa28.56■■■□□ 2.16
ATP1A1-208ENST00000488733 ABCC3O15438 1527 aa28.55■■■□□ 2.16
ATP1A1-208ENST00000488733 EFCAB6Q5THR3 1501 aa28.55■■■□□ 2.16
ATP1A1-208ENST00000488733 CEP152O94986 1710 aa28.54■■■□□ 2.16
ATP1A1-208ENST00000488733 PLA2R1Q13018 1463 aa28.54■■■□□ 2.16
ATP1A1-208ENST00000488733 WASHC2CQ9Y4E1 1318 aa28.53■■■□□ 2.16
ATP1A1-208ENST00000488733 SIGLEC1Q9BZZ2 1709 aa28.53■■■□□ 2.16
ATP1A1-208ENST00000488733 NBPF8Q3BBV2 869 aa28.52■■■□□ 2.16
ATP1A1-208ENST00000488733 ZC3H13Q5T200 1668 aaKnown RBP28.49■■■□□ 2.15
ATP1A1-208ENST00000488733 UHRF1BP1Q6BDS2 1440 aa28.48■■■□□ 2.15
ATP1A1-208ENST00000488733 EIF4G2P78344 907 aaKnown RBP eCLIP28.48■■■□□ 2.15
ATP1A1-208ENST00000488733 PTPRTO14522 1441 aa28.47■■■□□ 2.15
ATP1A1-208ENST00000488733 TRPM2O94759 1503 aa28.45■■■□□ 2.15
ATP1A1-208ENST00000488733 CAMSAP1Q5T5Y3 1602 aa28.45■■■□□ 2.14
ATP1A1-208ENST00000488733 NPATQ14207 1427 aa28.44■■■□□ 2.14
ATP1A1-208ENST00000488733 PPP6R1Q9UPN7 881 aa28.44■■■□□ 2.14
ATP1A1-208ENST00000488733 SPHKAPQ2M3C7 1700 aa28.44■■■□□ 2.14
ATP1A1-208ENST00000488733 MIER1Q8N108 512 aa28.43■■■□□ 2.14
ATP1A1-208ENST00000488733 HIRIP3Q9BW71 556 aaPredicted RBP28.42■■■□□ 2.14
ATP1A1-208ENST00000488733 HSPA5P11021 654 aaKnown RBP28.41■■■□□ 2.14
ATP1A1-208ENST00000488733 ARID4BQ4LE39 1312 aaPredicted RBP28.4■■■□□ 2.14
ATP1A1-208ENST00000488733 ARHGAP31Q2M1Z3 1444 aa28.39■■■□□ 2.14
ATP1A1-208ENST00000488733 MLECQ14165 292 aa28.39■■■□□ 2.14
ATP1A1-208ENST00000488733 DCAF11Q8TEB1 546 aa28.38■■■□□ 2.13
ATP1A1-208ENST00000488733 RALGAPBQ86X10 1494 aa28.35■■■□□ 2.13
ATP1A1-208ENST00000488733 ZNF326Q5BKZ1 582 aaKnown RBP28.34■■■□□ 2.13
ATP1A1-208ENST00000488733 CLTCL1P53675 1640 aa28.34■■■□□ 2.13
ATP1A1-208ENST00000488733 CNTLNQ9NXG0 1405 aa28.32■■■□□ 2.12
ATP1A1-208ENST00000488733 DDX10Q13206 875 aaKnown RBP28.32■■■□□ 2.12
ATP1A1-208ENST00000488733 KDM2AQ9Y2K7 1162 aa28.32■■■□□ 2.12
ATP1A1-208ENST00000488733 SPATA31E1Q6ZUB1 1445 aa28.31■■■□□ 2.12
ATP1A1-208ENST00000488733 CLTCQ00610 1675 aaKnown RBP28.31■■■□□ 2.12
ATP1A1-208ENST00000488733 NOS1P29475 1434 aa28.3■■■□□ 2.12
ATP1A1-208ENST00000488733 RGL3Q3MIN7 710 aa28.3■■■□□ 2.12
ATP1A1-208ENST00000488733 UGGT1Q9NYU2 1555 aa28.28■■■□□ 2.12
ATP1A1-208ENST00000488733 STAC3Q96MF2 364 aa28.28■■■□□ 2.12
ATP1A1-208ENST00000488733 ESF1Q9H501 851 aaKnown RBP28.27■■■□□ 2.12
ATP1A1-208ENST00000488733 PRAG1Q86YV5 1406 aa28.27■■■□□ 2.12
ATP1A1-208ENST00000488733 NEURL4Q96JN8 1562 aa28.26■■■□□ 2.11
ATP1A1-208ENST00000488733 CFAP65Q6ZU64 1925 aaKnown RBP28.25■■■□□ 2.11
ATP1A1-208ENST00000488733 SYNMO15061 1565 aa28.23■■■□□ 2.11
ATP1A1-208ENST00000488733 USP47Q96K76 1375 aa28.22■■■□□ 2.11
ATP1A1-208ENST00000488733 PREX1Q8TCU6 1659 aa28.22■■■□□ 2.11
ATP1A1-208ENST00000488733 ERVK-7P63135 1459 aa28.21■■■□□ 2.11
ATP1A1-208ENST00000488733 CARD11Q9BXL7 1154 aa28.21■■■□□ 2.11
ATP1A1-208ENST00000488733 TRPM1Q7Z4N2 1603 aa28.2■■■□□ 2.1
ATP1A1-208ENST00000488733 WASHC2AQ641Q2 1341 aa28.19■■■□□ 2.1
ATP1A1-208ENST00000488733 FBXO31Q5XUX0 539 aaPredicted RBP28.18■■■□□ 2.1
ATP1A1-208ENST00000488733 ZMYM3Q14202 1370 aa28.18■■■□□ 2.1
ATP1A1-208ENST00000488733 PIK3C2BO00750 1634 aa28.18■■■□□ 2.1
ATP1A1-208ENST00000488733 ROCK2O75116 1388 aaKnown RBP28.18■■■□□ 2.1
ATP1A1-208ENST00000488733 KIF1BO60333 1816 aa28.16■■■□□ 2.1
ATP1A1-208ENST00000488733 ADGRB3O60242 1522 aa28.15■■■□□ 2.1
ATP1A1-208ENST00000488733 POLR1AO95602 1720 aaPredicted RBP28.15■■■□□ 2.1
ATP1A1-208ENST00000488733 SLC52A1Q9NWF4 448 aa28.15■■■□□ 2.1
ATP1A1-208ENST00000488733 GPRASP1Q5JY77 1395 aa28.14■■■□□ 2.1
ATP1A1-208ENST00000488733 CCDC7Q96M83 1385 aa28.14■■■□□ 2.1
ATP1A1-208ENST00000488733 SPATA31D1Q6ZQQ2 1576 aa28.14■■■□□ 2.1
ATP1A1-208ENST00000488733 MROH2AA6NES4 1674 aa28.14■■■□□ 2.09
ATP1A1-208ENST00000488733 LAMC1P11047 1609 aa28.13■■■□□ 2.09
ATP1A1-208ENST00000488733 CHGAP10645 457 aaKnown RBP28.1■■■□□ 2.09
ATP1A1-208ENST00000488733 FER1L4A9Z1Z3 1794 aa28.1■■■□□ 2.09
ATP1A1-208ENST00000488733 IDI1Q13907 227 aa28.09■■■□□ 2.09
ATP1A1-208ENST00000488733 C11orf95C9JLR9 678 aaPredicted RBP28.08■■■□□ 2.09
ATP1A1-208ENST00000488733 ANP32CO43423 234 aa28.07■■■□□ 2.08
ATP1A1-208ENST00000488733 MADDQ8WXG6 1647 aa28.06■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms