RNA–Protein interactions for RNA: ENST00000488426.5

NELFE-209, Transcript of negative elongation factor complex member E, humanhuman

TSL 5

Gene NELFE, Length 1,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-209ENST00000488426 C3P01024 1663 aa18.76■□□□□ 0.59
NELFE-209ENST00000488426 RSPH4AQ5TD94 716 aa18.75■□□□□ 0.59
NELFE-209ENST00000488426 SHANK2Q9UPX8 1470 aa18.75■□□□□ 0.59
NELFE-209ENST00000488426 DHX29Q7Z478 1369 aaKnown RBP18.75■□□□□ 0.59
NELFE-209ENST00000488426 ZMYM3Q14202 1370 aa18.74■□□□□ 0.59
NELFE-209ENST00000488426 ADGRL2O95490 1459 aa18.74■□□□□ 0.59
NELFE-209ENST00000488426 TSPY4P0CV99 314 aa18.73■□□□□ 0.59
NELFE-209ENST00000488426 TSPY10P0CW01 314 aa18.73■□□□□ 0.59
NELFE-209ENST00000488426 KIF3BO15066 747 aa18.72■□□□□ 0.59
NELFE-209ENST00000488426 CHIC2Q9UKJ5 165 aa18.72■□□□□ 0.59
NELFE-209ENST00000488426 SETD1BQ9UPS6 1966 aaKnown RBP18.71■□□□□ 0.59
NELFE-209ENST00000488426 ACIN1Q9UKV3 1341 aaKnown RBP18.71■□□□□ 0.59
NELFE-209ENST00000488426 ILDR1Q86SU0 546 aaPredicted RBP18.69■□□□□ 0.58
NELFE-209ENST00000488426 RRP7BPQ9NSQ0 103 aa18.69■□□□□ 0.58
NELFE-209ENST00000488426 CLTCQ00610 1675 aaKnown RBP18.69■□□□□ 0.58
NELFE-209ENST00000488426 CNTLNQ9NXG0 1405 aa18.68■□□□□ 0.58
NELFE-209ENST00000488426 PREX1Q8TCU6 1659 aa18.68■□□□□ 0.58
NELFE-209ENST00000488426 NCOA1Q15788 1441 aa18.67■□□□□ 0.58
NELFE-209ENST00000488426 UHRF1BP1Q6BDS2 1440 aa18.66■□□□□ 0.58
NELFE-209ENST00000488426 ANKRD30AQ9BXX3 1397 aa18.66■□□□□ 0.58
NELFE-209ENST00000488426 MAST1Q9Y2H9 1570 aa18.65■□□□□ 0.58
NELFE-209ENST00000488426 FBXO31Q5XUX0 539 aaPredicted RBP18.64■□□□□ 0.57
NELFE-209ENST00000488426 PPP6R1Q9UPN7 881 aa18.63■□□□□ 0.57
NELFE-209ENST00000488426 MROH2AA6NES4 1674 aa18.62■□□□□ 0.57
NELFE-209ENST00000488426 STRCQ7RTU9 1775 aa18.61■□□□□ 0.57
NELFE-209ENST00000488426 WASHC2CQ9Y4E1 1318 aa18.6■□□□□ 0.57
NELFE-209ENST00000488426 NPATQ14207 1427 aa18.59■□□□□ 0.57
NELFE-209ENST00000488426 ANKRD50Q9ULJ7 1429 aa18.55■□□□□ 0.56
NELFE-209ENST00000488426 KIF15Q9NS87 1388 aa18.55■□□□□ 0.56
NELFE-209ENST00000488426 NCKAP5LQ9HCH0 1330 aa18.53■□□□□ 0.56
NELFE-209ENST00000488426 KDM5DQ9BY66 1539 aa18.53■□□□□ 0.56
NELFE-209ENST00000488426 MROH1Q8NDA8 1641 aa18.52■□□□□ 0.56
NELFE-209ENST00000488426 TRIM52Q96A61 297 aa18.52■□□□□ 0.55
NELFE-209ENST00000488426 DUOX2Q9NRD8 1548 aa18.51■□□□□ 0.55
NELFE-209ENST00000488426 CAMSAP1Q5T5Y3 1602 aa18.51■□□□□ 0.55
NELFE-209ENST00000488426 MYO3AQ8NEV4 1616 aa18.5■□□□□ 0.55
NELFE-209ENST00000488426 RNF17Q9BXT8 1623 aaKnown RBP18.5■□□□□ 0.55
NELFE-209ENST00000488426 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.5■□□□□ 0.554e-10■■□□□ 12.8
NELFE-209ENST00000488426 PZPP20742 1482 aa18.5■□□□□ 0.55
NELFE-209ENST00000488426 ABCC3O15438 1527 aa18.49■□□□□ 0.55
NELFE-209ENST00000488426 TNRQ92752 1358 aa18.49■□□□□ 0.55
NELFE-209ENST00000488426 CEP170BQ9Y4F5 1589 aaPredicted RBP18.48■□□□□ 0.55
NELFE-209ENST00000488426 DMRT2Q9Y5R5 561 aa18.48■□□□□ 0.55
NELFE-209ENST00000488426 CFAP65Q6ZU64 1925 aaKnown RBP18.48■□□□□ 0.55
NELFE-209ENST00000488426 MPHOSPH9Q99550 1183 aa18.47■□□□□ 0.55
NELFE-209ENST00000488426 TIMELESSQ9UNS1 1208 aa18.47■□□□□ 0.55
NELFE-209ENST00000488426 EIF2AK4Q9P2K8 1649 aaKnown RBP18.47■□□□□ 0.55
NELFE-209ENST00000488426 CERKQ8TCT0 537 aa18.46■□□□□ 0.55
NELFE-209ENST00000488426 FBXO41Q8TF61 875 aa18.46■□□□□ 0.55
NELFE-209ENST00000488426 ERBINQ96RT1 1412 aa18.45■□□□□ 0.54
NELFE-209ENST00000488426 CEP152O94986 1710 aa18.45■□□□□ 0.54
NELFE-209ENST00000488426 ZNF142P52746 1687 aaPredicted RBP18.44■□□□□ 0.54
NELFE-209ENST00000488426 PTPRTO14522 1441 aa18.44■□□□□ 0.54
NELFE-209ENST00000488426 A2ML1A8K2U0 1454 aa18.44■□□□□ 0.54
NELFE-209ENST00000488426 FAM135AQ9P2D6 1515 aa18.43■□□□□ 0.54
NELFE-209ENST00000488426 UNC13BO14795 1591 aa18.43■□□□□ 0.54
NELFE-209ENST00000488426 SIN3AQ96ST3 1273 aa18.41■□□□□ 0.54
NELFE-209ENST00000488426 SLC4A1APQ9BWU0 796 aaKnown RBP18.41■□□□□ 0.54
NELFE-209ENST00000488426 PRDM15P57071 1507 aaPredicted RBP18.39■□□□□ 0.53
NELFE-209ENST00000488426 ERVK-7P63135 1459 aa18.39■□□□□ 0.53
NELFE-209ENST00000488426 PLA2R1Q13018 1463 aa18.39■□□□□ 0.53
NELFE-209ENST00000488426 NUP155O75694 1391 aa18.38■□□□□ 0.53
NELFE-209ENST00000488426 NEUROD1Q13562 356 aa18.38■□□□□ 0.53
NELFE-209ENST00000488426 PKD2Q13563 968 aa18.38■□□□□ 0.53
NELFE-209ENST00000488426 ZC3H13Q5T200 1668 aaKnown RBP18.38■□□□□ 0.53
NELFE-209ENST00000488426 DEPDC5O75140 1603 aa18.38■□□□□ 0.53
NELFE-209ENST00000488426 SPATA31D1Q6ZQQ2 1576 aa18.37■□□□□ 0.53
NELFE-209ENST00000488426 ZNF335Q9H4Z2 1342 aaPredicted RBP18.37■□□□□ 0.53
NELFE-209ENST00000488426 ANKRD30BQ9BXX2 1392 aa18.37■□□□□ 0.53
NELFE-209ENST00000488426 LTBP4Q8N2S1 1624 aa18.36■□□□□ 0.53
NELFE-209ENST00000488426 NLRP1Q9C000 1473 aa18.35■□□□□ 0.53
NELFE-209ENST00000488426 IQGAP3Q86VI3 1631 aa18.35■□□□□ 0.53
NELFE-209ENST00000488426 THEMISQ8N1K5 641 aaPredicted RBP18.35■□□□□ 0.53
NELFE-209ENST00000488426 TONSLQ96HA7 1378 aa18.34■□□□□ 0.53
NELFE-209ENST00000488426 UGGT1Q9NYU2 1555 aa18.34■□□□□ 0.53
NELFE-209ENST00000488426 ARHGAP31Q2M1Z3 1444 aa18.34■□□□□ 0.53
NELFE-209ENST00000488426 VWDEQ8N2E2 1590 aa18.34■□□□□ 0.53
NELFE-209ENST00000488426 KANK1Q14678 1352 aa18.32■□□□□ 0.52
NELFE-209ENST00000488426 ANKLE2Q86XL3 938 aa18.32■□□□□ 0.52
NELFE-209ENST00000488426 NEURL4Q96JN8 1562 aa18.31■□□□□ 0.52
NELFE-209ENST00000488426 RPRD2Q5VT52 1461 aaKnown RBP18.31■□□□□ 0.52
NELFE-209ENST00000488426 IDI1Q13907 227 aa18.3■□□□□ 0.52
NELFE-209ENST00000488426 FOXD1Q16676 465 aa18.3■□□□□ 0.52
NELFE-209ENST00000488426 LMTK2Q8IWU2 1503 aa18.29■□□□□ 0.52
NELFE-209ENST00000488426 LTKP29376 864 aa18.29■□□□□ 0.52
NELFE-209ENST00000488426 ZNF316A6NFI3 1004 aaPredicted RBP18.28■□□□□ 0.52
NELFE-209ENST00000488426 PPP1R15AO75807 674 aaPredicted RBP18.26■□□□□ 0.51
NELFE-209ENST00000488426 UBR1Q8IWV7 1749 aa18.26■□□□□ 0.51
NELFE-209ENST00000488426 POLR1AO95602 1720 aaPredicted RBP18.25■□□□□ 0.51
NELFE-209ENST00000488426 SYNMO15061 1565 aa18.24■□□□□ 0.51
NELFE-209ENST00000488426 NOS1P29475 1434 aa18.24■□□□□ 0.51
NELFE-209ENST00000488426 EFCAB6Q5THR3 1501 aa18.24■□□□□ 0.51
NELFE-209ENST00000488426 NPHP4O75161 1426 aaPredicted RBP18.23■□□□□ 0.51
NELFE-209ENST00000488426 PIK3C2BO00750 1634 aa18.23■□□□□ 0.51
NELFE-209ENST00000488426 MED14O60244 1454 aa18.23■□□□□ 0.51
NELFE-209ENST00000488426 TXNDC2Q86VQ3 553 aa18.22■□□□□ 0.51
NELFE-209ENST00000488426 PELP1Q8IZL8 1130 aaKnown RBP18.22■□□□□ 0.51
NELFE-209ENST00000488426 STAG3Q9UJ98 1225 aa18.2■□□□□ 0.5
NELFE-209ENST00000488426 TET3O43151 1660 aa18.2■□□□□ 0.5
NELFE-209ENST00000488426 ARHGAP23Q9P227 1491 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms