RNA–Protein interactions for RNA: ENST00000487476.5

NF1-211, Transcript of neurofibromin 1, humanhuman

TSL 1 (best) BASIC

Gene NF1, Length 2,265 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-211ENST00000487476 ARID4BQ4LE39 1312 aaPredicted RBP24.95■■□□□ 1.58
NF1-211ENST00000487476 MLECQ14165 292 aa24.94■■□□□ 1.58
NF1-211ENST00000487476 DHX57Q6P158 1386 aaKnown RBP24.93■■□□□ 1.58
NF1-211ENST00000487476 MPHOSPH9Q99550 1183 aa24.92■■□□□ 1.58
NF1-211ENST00000487476 UNC13BO14795 1591 aa24.92■■□□□ 1.58
NF1-211ENST00000487476 AGLP35573 1532 aa24.92■■□□□ 1.58
NF1-211ENST00000487476 PZPP20742 1482 aa24.92■■□□□ 1.58
NF1-211ENST00000487476 SLC4A1APQ9BWU0 796 aaKnown RBP24.91■■□□□ 1.58
NF1-211ENST00000487476 MROH1Q8NDA8 1641 aa24.91■■□□□ 1.58
NF1-211ENST00000487476 DEPDC5O75140 1603 aa24.9■■□□□ 1.58
NF1-211ENST00000487476 RNF17Q9BXT8 1623 aaKnown RBP24.89■■□□□ 1.57
NF1-211ENST00000487476 BCORL1Q5H9F3 1711 aa24.89■■□□□ 1.57
NF1-211ENST00000487476 FOXD1Q16676 465 aa24.88■■□□□ 1.57
NF1-211ENST00000487476 CCER1Q8TC90 406 aaPredicted RBP24.88■■□□□ 1.57
NF1-211ENST00000487476 ACIN1Q9UKV3 1341 aaKnown RBP24.87■■□□□ 1.57
NF1-211ENST00000487476 PRDM15P57071 1507 aaPredicted RBP24.87■■□□□ 1.57
NF1-211ENST00000487476 FAM135AQ9P2D6 1515 aa24.87■■□□□ 1.57
NF1-211ENST00000487476 KDM5DQ9BY66 1539 aa24.86■■□□□ 1.57
NF1-211ENST00000487476 KANK1Q14678 1352 aa24.85■■□□□ 1.57
NF1-211ENST00000487476 WASHC2CQ9Y4E1 1318 aa24.84■■□□□ 1.57
NF1-211ENST00000487476 PKD2Q13563 968 aa24.84■■□□□ 1.57
NF1-211ENST00000487476 VWDEQ8N2E2 1590 aa24.83■■□□□ 1.57
NF1-211ENST00000487476 IQGAP3Q86VI3 1631 aa24.82■■□□□ 1.56
NF1-211ENST00000487476 ABCC3O15438 1527 aa24.78■■□□□ 1.56
NF1-211ENST00000487476 CEP152O94986 1710 aa24.75■■□□□ 1.55
NF1-211ENST00000487476 PPP6R1Q9UPN7 881 aa24.75■■□□□ 1.55
NF1-211ENST00000487476 LMTK2Q8IWU2 1503 aa24.74■■□□□ 1.55
NF1-211ENST00000487476 TET3O43151 1660 aa24.7■■□□□ 1.55
NF1-211ENST00000487476 ESF1Q9H501 851 aaKnown RBP24.7■■□□□ 1.55
NF1-211ENST00000487476 SIN3AQ96ST3 1273 aa24.69■■□□□ 1.54
NF1-211ENST00000487476 ANKRD30BQ9BXX2 1392 aa24.69■■□□□ 1.54
NF1-211ENST00000487476 EFCAB6Q5THR3 1501 aa24.69■■□□□ 1.54
NF1-211ENST00000487476 NPATQ14207 1427 aa24.69■■□□□ 1.54
NF1-211ENST00000487476 E9PCH4 1651 aa24.68■■□□□ 1.54
NF1-211ENST00000487476 CLTCQ00610 1675 aaKnown RBP24.68■■□□□ 1.54
NF1-211ENST00000487476 CAMSAP1Q5T5Y3 1602 aa24.66■■□□□ 1.54
NF1-211ENST00000487476 ZC3H13Q5T200 1668 aaKnown RBP24.66■■□□□ 1.54
NF1-211ENST00000487476 PLA2R1Q13018 1463 aa24.65■■□□□ 1.54
NF1-211ENST00000487476 ZMYM3Q14202 1370 aa24.65■■□□□ 1.54
NF1-211ENST00000487476 FBXO31Q5XUX0 539 aaPredicted RBP24.65■■□□□ 1.54
NF1-211ENST00000487476 NEUROD1Q13562 356 aa24.64■■□□□ 1.53
NF1-211ENST00000487476 ARHGAP31Q2M1Z3 1444 aa24.63■■□□□ 1.53
NF1-211ENST00000487476 CEBPAP49715 358 aaPredicted RBP24.63■■□□□ 1.53
NF1-211ENST00000487476 CLSPNQ9HAW4 1339 aa24.62■■□□□ 1.53
NF1-211ENST00000487476 PLPPR3Q6T4P5 718 aa24.61■■□□□ 1.53
NF1-211ENST00000487476 CNTLNQ9NXG0 1405 aa24.6■■□□□ 1.53
NF1-211ENST00000487476 MADDQ8WXG6 1647 aa24.6■■□□□ 1.53
NF1-211ENST00000487476 PTPRTO14522 1441 aa24.59■■□□□ 1.53
NF1-211ENST00000487476 RPRD2Q5VT52 1461 aaKnown RBP24.59■■□□□ 1.53
NF1-211ENST00000487476 FER1L4A9Z1Z3 1794 aa24.59■■□□□ 1.53
NF1-211ENST00000487476 CFAP65Q6ZU64 1925 aaKnown RBP24.59■■□□□ 1.53
NF1-211ENST00000487476 ADAMTSL3P82987 1691 aa24.59■■□□□ 1.53
NF1-211ENST00000487476 NOS1P29475 1434 aa24.55■■□□□ 1.52
NF1-211ENST00000487476 UGGT1Q9NYU2 1555 aa24.54■■□□□ 1.52
NF1-211ENST00000487476 RIMS1Q86UR5 1692 aaKnown RBP24.53■■□□□ 1.52
NF1-211ENST00000487476 SPHKAPQ2M3C7 1700 aa24.52■■□□□ 1.52
NF1-211ENST00000487476 ERVK-7P63135 1459 aa24.52■■□□□ 1.52
NF1-211ENST00000487476 CCDC144AA2RUR9 1427 aa24.52■■□□□ 1.52
NF1-211ENST00000487476 TRPM2O94759 1503 aa24.52■■□□□ 1.52
NF1-211ENST00000487476 MROH2AA6NES4 1674 aa24.51■■□□□ 1.51
NF1-211ENST00000487476 KDM4FA0A1W2PPD8 638 aa24.51■■□□□ 1.51
NF1-211ENST00000487476 SYNMO15061 1565 aa24.5■■□□□ 1.51
NF1-211ENST00000487476 PREX1Q8TCU6 1659 aa24.5■■□□□ 1.51
NF1-211ENST00000487476 C3P01024 1663 aa24.49■■□□□ 1.51
NF1-211ENST00000487476 IDI1Q13907 227 aa24.47■■□□□ 1.51
NF1-211ENST00000487476 CLTCL1P53675 1640 aa24.47■■□□□ 1.51
NF1-211ENST00000487476 SPATA31D1Q6ZQQ2 1576 aa24.46■■□□□ 1.51
NF1-211ENST00000487476 PTPRMP28827 1452 aa24.44■■□□□ 1.5
NF1-211ENST00000487476 TNRQ92752 1358 aa24.44■■□□□ 1.5
NF1-211ENST00000487476 RGL3Q3MIN7 710 aa24.44■■□□□ 1.5
NF1-211ENST00000487476 SLC52A1Q9NWF4 448 aa24.42■■□□□ 1.5
NF1-211ENST00000487476 CHGAP10645 457 aaKnown RBP24.42■■□□□ 1.5
NF1-211ENST00000487476 L3MBTL2Q969R5 705 aa24.4■■□□□ 1.5
NF1-211ENST00000487476 TONSLQ96HA7 1378 aa24.39■■□□□ 1.5
NF1-211ENST00000487476 PIK3C2BO00750 1634 aa24.39■■□□□ 1.49
NF1-211ENST00000487476 SPATA31E1Q6ZUB1 1445 aa24.38■■□□□ 1.49
NF1-211ENST00000487476 ZEB1P37275 1124 aaPredicted RBP24.33■■□□□ 1.49
NF1-211ENST00000487476 ZNF326Q5BKZ1 582 aaKnown RBP24.32■■□□□ 1.48
NF1-211ENST00000487476 STAG3Q9UJ98 1225 aa24.32■■□□□ 1.48
NF1-211ENST00000487476 DCAF11Q8TEB1 546 aa24.31■■□□□ 1.48
NF1-211ENST00000487476 TIMELESSQ9UNS1 1208 aa24.31■■□□□ 1.48
NF1-211ENST00000487476 KDM2AQ9Y2K7 1162 aa24.31■■□□□ 1.48
NF1-211ENST00000487476 ADGRB3O60242 1522 aa24.3■■□□□ 1.48
NF1-211ENST00000487476 KIF1BO60333 1816 aa24.29■■□□□ 1.48
NF1-211ENST00000487476 NLRP1Q9C000 1473 aa24.29■■□□□ 1.48
NF1-211ENST00000487476 TMEM131LA2VDJ0 1609 aa24.28■■□□□ 1.48
NF1-211ENST00000487476 PPP1R15AO75807 674 aaPredicted RBP24.27■■□□□ 1.48
NF1-211ENST00000487476 A2ML1A8K2U0 1454 aa24.27■■□□□ 1.48
NF1-211ENST00000487476 NUTM2DQ5VT03 806 aaPredicted RBP24.26■■□□□ 1.47
NF1-211ENST00000487476 MYO3AQ8NEV4 1616 aa24.25■■□□□ 1.47
NF1-211ENST00000487476 MYO5BQ9ULV0 1848 aa24.23■■□□□ 1.47
NF1-211ENST00000487476 NEURL4Q96JN8 1562 aa24.23■■□□□ 1.47
NF1-211ENST00000487476 NBPF8Q3BBV2 869 aa24.22■■□□□ 1.47
NF1-211ENST00000487476 SETD1BQ9UPS6 1966 aaKnown RBP24.2■■□□□ 1.46
NF1-211ENST00000487476 UBR1Q8IWV7 1749 aa24.2■■□□□ 1.46
NF1-211ENST00000487476 SENP3Q9H4L4 574 aaPredicted RBP24.19■■□□□ 1.46
NF1-211ENST00000487476 CEP170BQ9Y4F5 1589 aaPredicted RBP24.19■■□□□ 1.46
NF1-211ENST00000487476 RPGRIP1LQ68CZ1 1315 aa24.19■■□□□ 1.46
NF1-211ENST00000487476 ADGRF5Q8IZF2 1346 aa24.19■■□□□ 1.46
NF1-211ENST00000487476 UHRF1BP1Q6BDS2 1440 aa24.17■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms