RNA–Protein interactions for RNA: ENST00000487257.1

PDE12-202, Transcript of phosphodiesterase 12, humanhuman

TSL 1 (best) BASIC

Gene PDE12, Length 3,040 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE12-202ENST00000487257 SAMD9LQ8IVG5 1584 aa22.49■■□□□ 1.19
PDE12-202ENST00000487257 FAM135AQ9P2D6 1515 aa22.49■■□□□ 1.19
PDE12-202ENST00000487257 ARHGEF12Q9NZN5 1544 aa22.48■■□□□ 1.19
PDE12-202ENST00000487257 CCDC144AA2RUR9 1427 aa22.48■■□□□ 1.19
PDE12-202ENST00000487257 FANCIQ9NVI1 1328 aa22.47■■□□□ 1.19
PDE12-202ENST00000487257 KDM5DQ9BY66 1539 aa22.46■■□□□ 1.19
PDE12-202ENST00000487257 CDC42BPBQ9Y5S2 1711 aa22.46■■□□□ 1.19
PDE12-202ENST00000487257 SYCP2Q9BX26 1530 aa22.45■■□□□ 1.19
PDE12-202ENST00000487257 MYBBP1AQ9BQG0 1328 aaKnown RBP22.44■■□□□ 1.18
PDE12-202ENST00000487257 CCDC136Q96JN2 1154 aa22.44■■□□□ 1.18
PDE12-202ENST00000487257 ARHGAP5Q13017 1502 aa22.44■■□□□ 1.18
PDE12-202ENST00000487257 ARHGEF5Q12774 1597 aa22.43■■□□□ 1.18
PDE12-202ENST00000487257 ERICH6Q7L0X2 663 aa22.43■■□□□ 1.18
PDE12-202ENST00000487257 CC2D1BQ5T0F9 858 aaKnown RBP22.41■■□□□ 1.18
PDE12-202ENST00000487257 RSPH4AQ5TD94 716 aa22.41■■□□□ 1.18
PDE12-202ENST00000487257 RALBP1Q15311 655 aa22.4■■□□□ 1.18
PDE12-202ENST00000487257 PRAG1Q86YV5 1406 aa22.4■■□□□ 1.18
PDE12-202ENST00000487257 PLEKHH2Q8IVE3 1493 aa22.39■■□□□ 1.18
PDE12-202ENST00000487257 PREX2Q70Z35 1606 aa22.39■■□□□ 1.17
PDE12-202ENST00000487257 PLA2R1Q13018 1463 aa22.39■■□□□ 1.17
PDE12-202ENST00000487257 TTC37Q6PGP7 1564 aa22.39■■□□□ 1.17
PDE12-202ENST00000487257 BRD4O60885 1362 aaPredicted RBP22.37■■□□□ 1.17
PDE12-202ENST00000487257 RNF123Q5XPI4 1314 aa22.36■■□□□ 1.17
PDE12-202ENST00000487257 LRPPRCP42704 1394 aaKnown RBP22.35■■□□□ 1.17
PDE12-202ENST00000487257 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.35■■□□□ 1.17
PDE12-202ENST00000487257 ERCC6L2Q5T890 1561 aa22.35■■□□□ 1.17
PDE12-202ENST00000487257 KTN1Q86UP2 1357 aaKnown RBP22.34■■□□□ 1.17
PDE12-202ENST00000487257 A2MP01023 1474 aa22.34■■□□□ 1.17
PDE12-202ENST00000487257 DISP3Q9P2K9 1392 aa22.34■■□□□ 1.17
PDE12-202ENST00000487257 NLRP13Q86W25 1043 aa22.33■■□□□ 1.17
PDE12-202ENST00000487257 PER1O15534 1290 aaPredicted RBP22.33■■□□□ 1.17
PDE12-202ENST00000487257 PANK3Q9H999 370 aa22.32■■□□□ 1.16
PDE12-202ENST00000487257 TESK2Q96S53 571 aa22.31■■□□□ 1.16
PDE12-202ENST00000487257 CHD1O14646 1710 aa22.31■■□□□ 1.16
PDE12-202ENST00000487257 CDCA7LQ96GN5 454 aa22.31■■□□□ 1.16
PDE12-202ENST00000487257 TRPM1Q7Z4N2 1603 aa22.3■■□□□ 1.16
PDE12-202ENST00000487257 PARD3Q8TEW0 1356 aa22.28■■□□□ 1.16
PDE12-202ENST00000487257 EXOC6Q8TAG9 804 aa22.27■■□□□ 1.16
PDE12-202ENST00000487257 RCAN3Q9UKA8 241 aa22.26■■□□□ 1.15
PDE12-202ENST00000487257 RRP1P56182 461 aaKnown RBP22.25■■□□□ 1.15
PDE12-202ENST00000487257 E9PCH4 1651 aa22.25■■□□□ 1.15
PDE12-202ENST00000487257 AFAP1Q8N556 730 aa22.24■■□□□ 1.15
PDE12-202ENST00000487257 TMF1P82094 1093 aa22.24■■□□□ 1.15
PDE12-202ENST00000487257 GPRASP1Q5JY77 1395 aa22.23■■□□□ 1.15
PDE12-202ENST00000487257 UNC13BO14795 1591 aa22.23■■□□□ 1.15
PDE12-202ENST00000487257 EFCAB2Q5VUJ9 269 aa22.23■■□□□ 1.15
PDE12-202ENST00000487257 ERBINQ96RT1 1412 aa22.22■■□□□ 1.15
PDE12-202ENST00000487257 PLIN1O60240 522 aa22.21■■□□□ 1.15
PDE12-202ENST00000487257 COL17A1Q9UMD9 1497 aaPredicted RBP22.21■■□□□ 1.15
PDE12-202ENST00000487257 TRAPPC8Q9Y2L5 1435 aa22.2■■□□□ 1.14
PDE12-202ENST00000487257 ABCC2Q92887 1545 aa22.2■■□□□ 1.14
PDE12-202ENST00000487257 MYO5CQ9NQX4 1742 aa22.2■■□□□ 1.14
PDE12-202ENST00000487257 PAK3O75914 559 aaPredicted RBP22.19■■□□□ 1.14
PDE12-202ENST00000487257 MAST1Q9Y2H9 1570 aa22.19■■□□□ 1.14
PDE12-202ENST00000487257 MYT1LQ9UL68 1186 aa22.18■■□□□ 1.14
PDE12-202ENST00000487257 DUOX2Q9NRD8 1548 aa22.18■■□□□ 1.14
PDE12-202ENST00000487257 IQGAP3Q86VI3 1631 aa22.17■■□□□ 1.14
PDE12-202ENST00000487257 PRDM15P57071 1507 aaPredicted RBP22.17■■□□□ 1.14
PDE12-202ENST00000487257 PLCH2O75038 1416 aa22.16■■□□□ 1.14
PDE12-202ENST00000487257 SPAG9O60271 1321 aaKnown RBP22.15■■□□□ 1.14
PDE12-202ENST00000487257 PLXNC1O60486 1568 aa22.15■■□□□ 1.14
PDE12-202ENST00000487257 NOP58Q9Y2X3 529 aaKnown RBP22.14■■□□□ 1.13
PDE12-202ENST00000487257 SHROOM2Q13796 1616 aa22.13■■□□□ 1.13
PDE12-202ENST00000487257 ADAMTS8Q9UP79 889 aa22.13■■□□□ 1.13
PDE12-202ENST00000487257 NBR1Q14596 966 aa22.12■■□□□ 1.13
PDE12-202ENST00000487257 KNSTRNQ9Y448 316 aa22.12■■□□□ 1.13
PDE12-202ENST00000487257 PDE3BQ13370 1112 aa22.11■■□□□ 1.13
PDE12-202ENST00000487257 WASHC2CQ9Y4E1 1318 aa22.1■■□□□ 1.13
PDE12-202ENST00000487257 NPM2Q86SE8 214 aaKnown RBP22.1■■□□□ 1.13
PDE12-202ENST00000487257 SKAP1Q86WV1 359 aa22.1■■□□□ 1.13
PDE12-202ENST00000487257 ANP32AP39687 249 aaKnown RBP22.09■■□□□ 1.13
PDE12-202ENST00000487257 ATP10AO60312 1499 aa22.08■■□□□ 1.12
PDE12-202ENST00000487257 ZCCHC11Q5TAX3 1644 aaKnown RBP22.07■■□□□ 1.12
PDE12-202ENST00000487257 MAGI2Q86UL8 1455 aa22.07■■□□□ 1.12
PDE12-202ENST00000487257 EIF2AK4Q9P2K8 1649 aaKnown RBP22.07■■□□□ 1.12
PDE12-202ENST00000487257 KIF3BO15066 747 aa22.06■■□□□ 1.12
PDE12-202ENST00000487257 ABCC1P33527 1531 aa22.05■■□□□ 1.12
PDE12-202ENST00000487257 PPP2R1AP30153 589 aa22.05■■□□□ 1.12
PDE12-202ENST00000487257 WDR43Q15061 677 aaKnown RBP eCLIP22.04■■□□□ 1.12
PDE12-202ENST00000487257 CRBNQ96SW2 442 aa22.04■■□□□ 1.12
PDE12-202ENST00000487257 LAMC1P11047 1609 aa22.03■■□□□ 1.12
PDE12-202ENST00000487257 C20orf194Q5TEA3 1177 aa22.03■■□□□ 1.12
PDE12-202ENST00000487257 IPO9Q96P70 1041 aaKnown RBP22.03■■□□□ 1.12
PDE12-202ENST00000487257 WDR7Q9Y4E6 1490 aa22.03■■□□□ 1.12
PDE12-202ENST00000487257 BLMP54132 1417 aaPredicted RBP22.02■■□□□ 1.12
PDE12-202ENST00000487257 AMER1Q5JTC6 1135 aaPredicted RBP22.02■■□□□ 1.12
PDE12-202ENST00000487257 CCDC146Q8IYE0 955 aa22■■□□□ 1.11
PDE12-202ENST00000487257 CFAP70Q5T0N1 1121 aa21.99■■□□□ 1.11
PDE12-202ENST00000487257 ZBTB47Q9UFB7 747 aaPredicted RBP21.99■■□□□ 1.11
PDE12-202ENST00000487257 PLEKHH1Q9ULM0 1364 aa21.97■■□□□ 1.11
PDE12-202ENST00000487257 MADDQ8WXG6 1647 aa21.97■■□□□ 1.11
PDE12-202ENST00000487257 PDE4AP27815 886 aa21.97■■□□□ 1.11
PDE12-202ENST00000487257 SCAPERQ9BY12 1400 aa21.96■■□□□ 1.11
PDE12-202ENST00000487257 RNF17Q9BXT8 1623 aaKnown RBP21.96■■□□□ 1.11
PDE12-202ENST00000487257 TCERG1O14776 1098 aaKnown RBP21.95■■□□□ 1.1
PDE12-202ENST00000487257 SCAF11Q99590 1463 aaKnown RBP21.95■■□□□ 1.1
PDE12-202ENST00000487257 CDCA8Q53HL2 280 aa21.95■■□□□ 1.1
PDE12-202ENST00000487257 ZFYVE16Q7Z3T8 1539 aa21.94■■□□□ 1.1
PDE12-202ENST00000487257 CLTCL1P53675 1640 aa21.94■■□□□ 1.1
PDE12-202ENST00000487257 ADGRF5Q8IZF2 1346 aa21.93■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms