RNA–Protein interactions for RNA: ENST00000487117.1

HP1BP3-212, Transcript of heterochromatin protein 1 binding protein 3, humanhuman

TSL 2

Gene HP1BP3, Length 1,598 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HP1BP3-212ENST00000487117 PPP4R3BQ5MIZ7 849 aa12.98□□□□□ -0.33
HP1BP3-212ENST00000487117 LCE2DQ5TA82 110 aaPredicted RBP12.98□□□□□ -0.33
HP1BP3-212ENST00000487117 PTGDRQ13258 359 aa12.98□□□□□ -0.33
HP1BP3-212ENST00000487117 NPDC1Q9NQX5 325 aaPredicted RBP12.97□□□□□ -0.33
HP1BP3-212ENST00000487117 C6orf132Q5T0Z8 1188 aa12.95□□□□□ -0.34
HP1BP3-212ENST00000487117 HIC1Q14526 733 aa12.94□□□□□ -0.34
HP1BP3-212ENST00000487117 SLC24A3Q9HC58 644 aa12.94□□□□□ -0.34
HP1BP3-212ENST00000487117 GNPATO15228 680 aa12.93□□□□□ -0.34
HP1BP3-212ENST00000487117 MARVELD3Q96A59 401 aa12.93□□□□□ -0.34
HP1BP3-212ENST00000487117 BCL2L12Q9HB09 334 aa12.92□□□□□ -0.34
HP1BP3-212ENST00000487117 EMP3P54852 163 aa12.91□□□□□ -0.34
HP1BP3-212ENST00000487117 ERBB3P21860 1342 aa12.91□□□□□ -0.34
HP1BP3-212ENST00000487117 FECHP22830 423 aa12.9□□□□□ -0.34
HP1BP3-212ENST00000487117 KRI1Q8N9T8 703 aaKnown RBP12.9□□□□□ -0.34
HP1BP3-212ENST00000487117 VARS2Q5ST30 1063 aaKnown RBP12.89□□□□□ -0.35
HP1BP3-212ENST00000487117 MAP2K5Q13163 448 aa12.87□□□□□ -0.35
HP1BP3-212ENST00000487117 CERKQ8TCT0 537 aa12.87□□□□□ -0.35
HP1BP3-212ENST00000487117 COL9A1P20849 921 aa12.86□□□□□ -0.35
HP1BP3-212ENST00000487117 PTPREP23469 700 aa12.86□□□□□ -0.35
HP1BP3-212ENST00000487117 AK7Q96M32 723 aa12.86□□□□□ -0.35
HP1BP3-212ENST00000487117 MINK1Q8N4C8 1332 aaPredicted RBP12.85□□□□□ -0.35
HP1BP3-212ENST00000487117 FAM205CA6NFA0 338 aa12.84□□□□□ -0.35
HP1BP3-212ENST00000487117 IRF6O14896 467 aa12.83□□□□□ -0.36
HP1BP3-212ENST00000487117 KCNK17Q96T54 332 aa12.82□□□□□ -0.36
HP1BP3-212ENST00000487117 PPP1R3GB7ZBB8 358 aa12.81□□□□□ -0.36
HP1BP3-212ENST00000487117 CCDC102AQ96A19 550 aa12.81□□□□□ -0.36
HP1BP3-212ENST00000487117 POTEB3A0JP26 581 aa12.81□□□□□ -0.36
HP1BP3-212ENST00000487117 PRSS12P56730 875 aa12.81□□□□□ -0.36
HP1BP3-212ENST00000487117 POTEBQ6S5H4 581 aa12.81□□□□□ -0.36
HP1BP3-212ENST00000487117 PADI6Q6TGC4 694 aa12.81□□□□□ -0.36
HP1BP3-212ENST00000487117 RBM27Q9P2N5 1060 aaKnown RBP12.81□□□□□ -0.36
HP1BP3-212ENST00000487117 TTC13Q8NBP0 860 aa12.8□□□□□ -0.36
HP1BP3-212ENST00000487117 POTEEQ6S8J3 1075 aa12.79□□□□□ -0.36
HP1BP3-212ENST00000487117 CDCA7LQ96GN5 454 aa12.79□□□□□ -0.36
HP1BP3-212ENST00000487117 HS3ST6Q96QI5 342 aa12.79□□□□□ -0.36
HP1BP3-212ENST00000487117 TRIM66O15016 1216 aa12.78□□□□□ -0.36
HP1BP3-212ENST00000487117 PSEN2P49810 448 aa12.77□□□□□ -0.36
HP1BP3-212ENST00000487117 ZNF687Q8N1G0 1237 aa12.77□□□□□ -0.36
HP1BP3-212ENST00000487117 PCDH10Q9P2E7 1040 aa12.77□□□□□ -0.37
HP1BP3-212ENST00000487117 ARHGAP33O14559 1287 aa12.76□□□□□ -0.37
HP1BP3-212ENST00000487117 KCNH8Q96L42 1107 aa12.76□□□□□ -0.37
HP1BP3-212ENST00000487117 FAM198AQ9UFP1 575 aa12.76□□□□□ -0.37
HP1BP3-212ENST00000487117 AXIN2Q9Y2T1 843 aa12.75□□□□□ -0.37
HP1BP3-212ENST00000487117 PBX2P40425 430 aa12.74□□□□□ -0.37
HP1BP3-212ENST00000487117 BRPF1P55201 1214 aaPredicted RBP12.74□□□□□ -0.37
HP1BP3-212ENST00000487117 FAM161AQ3B820 660 aa12.73□□□□□ -0.37
HP1BP3-212ENST00000487117 TSKSQ9UJT2 592 aa12.73□□□□□ -0.37
HP1BP3-212ENST00000487117 ZBED2Q9BTP6 218 aa12.73□□□□□ -0.37
HP1BP3-212ENST00000487117 ADGRG1Q9Y653 693 aa12.73□□□□□ -0.37
HP1BP3-212ENST00000487117 PROX2Q3B8N5 592 aa12.72□□□□□ -0.37
HP1BP3-212ENST00000487117 DMRTA1Q5VZB9 504 aa12.72□□□□□ -0.37
HP1BP3-212ENST00000487117 TRIM6-TRIM34B2RNG4 842 aa12.71□□□□□ -0.37
HP1BP3-212ENST00000487117 PDE4DQ08499 809 aa12.71□□□□□ -0.37
HP1BP3-212ENST00000487117 NEUROD2Q15784 382 aa12.7□□□□□ -0.38
HP1BP3-212ENST00000487117 AMHR2Q16671 573 aa12.69□□□□□ -0.38
HP1BP3-212ENST00000487117 OATP04181 439 aa12.69□□□□□ -0.38
HP1BP3-212ENST00000487117 PHOX2BQ99453 314 aa12.69□□□□□ -0.38
HP1BP3-212ENST00000487117 C3orf80F5H4A9 247 aa12.68□□□□□ -0.38
HP1BP3-212ENST00000487117 ONECUT3O60422 494 aaPredicted RBP12.68□□□□□ -0.38
HP1BP3-212ENST00000487117 METTL3Q86U44 580 aaKnown RBP12.68□□□□□ -0.38
HP1BP3-212ENST00000487117 PXYLP1Q8TE99 480 aa12.67□□□□□ -0.38
HP1BP3-212ENST00000487117 SLC4A5Q9BY07 1137 aa12.67□□□□□ -0.38
HP1BP3-212ENST00000487117 PACS2Q86VP3 889 aa12.66□□□□□ -0.38
HP1BP3-212ENST00000487117 CDAN1Q8IWY9 1227 aa12.65□□□□□ -0.38
HP1BP3-212ENST00000487117 GPBP1L1Q9HC44 474 aaPredicted RBP12.65□□□□□ -0.38
HP1BP3-212ENST00000487117 EYA1Q99502 592 aa12.64□□□□□ -0.39
HP1BP3-212ENST00000487117 KIAA1468Q9P260 1216 aa12.64□□□□□ -0.39
HP1BP3-212ENST00000487117 NBPF26B4DH59 902 aa12.64□□□□□ -0.39
HP1BP3-212ENST00000487117 NUDT18Q6ZVK8 323 aa12.64□□□□□ -0.39
HP1BP3-212ENST00000487117 RBM46Q8TBY0 533 aaKnown RBP12.64□□□□□ -0.39
HP1BP3-212ENST00000487117 PARP9Q8IXQ6 854 aa12.63□□□□□ -0.39
HP1BP3-212ENST00000487117 TATDN2Q93075 761 aa12.63□□□□□ -0.39
HP1BP3-212ENST00000487117 PNMA3Q9UL41 463 aa12.63□□□□□ -0.39
HP1BP3-212ENST00000487117 VPS9D1Q9Y2B5 631 aa12.63□□□□□ -0.39
HP1BP3-212ENST00000487117 RABGEF1Q9UJ41 708 aa12.61□□□□□ -0.39
HP1BP3-212ENST00000487117 NLRP7Q8WX94 980 aa12.6□□□□□ -0.39
HP1BP3-212ENST00000487117 KDM4CQ9H3R0 1056 aa12.6□□□□□ -0.39
HP1BP3-212ENST00000487117 LSM11P83369 360 aaKnown RBP eCLIP12.6□□□□□ -0.39
HP1BP3-212ENST00000487117 TTLL12Q14166 644 aaPredicted RBP12.6□□□□□ -0.39
HP1BP3-212ENST00000487117 TMUB1Q9BVT8 246 aa12.6□□□□□ -0.39
HP1BP3-212ENST00000487117 SMAPO00193 183 aa12.59□□□□□ -0.39
HP1BP3-212ENST00000487117 MDM2Q00987 491 aaPredicted RBP12.59□□□□□ -0.39
HP1BP3-212ENST00000487117 REPIN1Q9BWE0 567 aaKnown RBP12.59□□□□□ -0.39
HP1BP3-212ENST00000487117 TK2O00142 265 aa12.58□□□□□ -0.4
HP1BP3-212ENST00000487117 RCCD1A6NED2 376 aa12.57□□□□□ -0.4
HP1BP3-212ENST00000487117 CLCN1P35523 988 aa12.57□□□□□ -0.4
HP1BP3-212ENST00000487117 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.56□□□□□ -0.4
HP1BP3-212ENST00000487117 GIGYF2Q6Y7W6 1299 aaKnown RBP12.56□□□□□ -0.4
HP1BP3-212ENST00000487117 GPCPD1Q9NPB8 672 aa12.56□□□□□ -0.4
HP1BP3-212ENST00000487117 ADGRD1Q6QNK2 874 aa12.55□□□□□ -0.4
HP1BP3-212ENST00000487117 SEPT9Q9UHD8 586 aaPredicted RBP12.55□□□□□ -0.4
HP1BP3-212ENST00000487117 DNAJB2P25686 324 aa12.54□□□□□ -0.4
HP1BP3-212ENST00000487117 BHMG1C9JSJ3 638 aaPredicted RBP12.53□□□□□ -0.4
HP1BP3-212ENST00000487117 KRTAP3-3Q9BYR6 98 aa12.52□□□□□ -0.4
HP1BP3-212ENST00000487117 KRTAP3-2Q9BYR7 98 aa12.52□□□□□ -0.4
HP1BP3-212ENST00000487117 ANKRD13DQ6ZTN6 518 aa12.52□□□□□ -0.41
HP1BP3-212ENST00000487117 TMEM134Q9H6X4 195 aa12.51□□□□□ -0.41
HP1BP3-212ENST00000487117 HRO43593 1189 aa12.5□□□□□ -0.41
HP1BP3-212ENST00000487117 MS4A1P11836 297 aa12.5□□□□□ -0.41
HP1BP3-212ENST00000487117 NBPF3Q9H094 633 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms