RNA–Protein interactions for RNA: ENST00000487109.5

ABCA2-218, Transcript of ATP binding cassette subfamily A member 2, humanhuman

TSL 1 (best)

Gene ABCA2, Length 8,031 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA2-218ENST00000487109 SIN3AQ96ST3 1273 aa15.35■□□□□ 0.05
ABCA2-218ENST00000487109 GOLGA6L3A6NEY3 463 aa15.34■□□□□ 0.05
ABCA2-218ENST00000487109 SLKQ9H2G2 1235 aaPredicted RBP15.34■□□□□ 0.05
ABCA2-218ENST00000487109 UACAQ9BZF9 1416 aa15.34■□□□□ 0.05
ABCA2-218ENST00000487109 RRP12Q5JTH9 1297 aaKnown RBP15.34■□□□□ 0.05
ABCA2-218ENST00000487109 RWDD1Q9H446 243 aaPredicted RBP15.33■□□□□ 0.05
ABCA2-218ENST00000487109 TOMM22Q9NS69 142 aa15.33■□□□□ 0.04
ABCA2-218ENST00000487109 NUP155O75694 1391 aa15.33■□□□□ 0.04
ABCA2-218ENST00000487109 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.33■□□□□ 0.04
ABCA2-218ENST00000487109 KIF3AQ9Y496 699 aa15.33■□□□□ 0.04
ABCA2-218ENST00000487109 KIF16BQ96L93 1317 aa15.33■□□□□ 0.04
ABCA2-218ENST00000487109 CCAR2Q8N163 923 aaKnown RBP15.33■□□□□ 0.04
ABCA2-218ENST00000487109 RAPGEF2Q9Y4G8 1499 aa15.32■□□□□ 0.04
ABCA2-218ENST00000487109 TPM1P09493 284 aa15.32■□□□□ 0.04
ABCA2-218ENST00000487109 MROH2BQ7Z745 1585 aa15.32■□□□□ 0.04
ABCA2-218ENST00000487109 GPS2Q13227 327 aa15.32■□□□□ 0.04
ABCA2-218ENST00000487109 STK31Q9BXU1 1019 aa15.32■□□□□ 0.04
ABCA2-218ENST00000487109 LMOD3Q0VAK6 560 aa15.31■□□□□ 0.04
ABCA2-218ENST00000487109 STK26Q9P289 416 aa15.3■□□□□ 0.04
ABCA2-218ENST00000487109 H3BQV1 296 aa15.3■□□□□ 0.04
ABCA2-218ENST00000487109 IFFO2Q5TF58 517 aa15.3■□□□□ 0.04
ABCA2-218ENST00000487109 CADPSQ9ULU8 1353 aa15.29■□□□□ 0.04
ABCA2-218ENST00000487109 MFAP1P55081 439 aaKnown RBP15.29■□□□□ 0.04
ABCA2-218ENST00000487109 PMFBP1Q8TBY8 1022 aa15.29■□□□□ 0.04
ABCA2-218ENST00000487109 HMMRO75330 724 aa15.29■□□□□ 0.04
ABCA2-218ENST00000487109 GTF2E1P29083 439 aaPredicted RBP15.29■□□□□ 0.04
ABCA2-218ENST00000487109 GOLGA6L19H0YKK7 550 aa15.29■□□□□ 0.04
ABCA2-218ENST00000487109 NOL8Q76FK4 1167 aaKnown RBP15.28■□□□□ 0.04
ABCA2-218ENST00000487109 AKAP17AQ02040 695 aaKnown RBP15.28■□□□□ 0.04
ABCA2-218ENST00000487109 TCERG1O14776 1098 aaKnown RBP15.27■□□□□ 0.04
ABCA2-218ENST00000487109 CTDP1Q9Y5B0 961 aaPredicted RBP15.27■□□□□ 0.04
ABCA2-218ENST00000487109 PHLDB1Q86UU1 1377 aa15.27■□□□□ 0.03
ABCA2-218ENST00000487109 TRIM34Q9BYJ4 488 aa15.26■□□□□ 0.03
ABCA2-218ENST00000487109 ST18O60284 1047 aa15.26■□□□□ 0.03
ABCA2-218ENST00000487109 MPHOSPH9Q99550 1183 aa15.26■□□□□ 0.03
ABCA2-218ENST00000487109 PCMTD1Q96MG8 357 aaPredicted RBP15.25■□□□□ 0.03
ABCA2-218ENST00000487109 WASHC2CQ9Y4E1 1318 aa15.25■□□□□ 0.03
ABCA2-218ENST00000487109 U2AF1L5P0DN76 240 aaPredicted RBP15.24■□□□□ 0.03
ABCA2-218ENST00000487109 U2AF1Q01081 240 aaKnown RBP eCLIP15.24■□□□□ 0.03
ABCA2-218ENST00000487109 TDRD9Q8NDG6 1382 aaKnown RBP15.24■□□□□ 0.03
ABCA2-218ENST00000487109 SLC4A10Q6U841 1118 aa15.24■□□□□ 0.03
ABCA2-218ENST00000487109 WIZO95785 1651 aa15.24■□□□□ 0.03
ABCA2-218ENST00000487109 FAM184AQ8NB25 1140 aa15.24■□□□□ 0.03
ABCA2-218ENST00000487109 KIF3BO15066 747 aa15.23■□□□□ 0.03
ABCA2-218ENST00000487109 HSPA5P11021 654 aaKnown RBP15.23■□□□□ 0.03
ABCA2-218ENST00000487109 FOXD4L1Q9NU39 408 aa15.23■□□□□ 0.03
ABCA2-218ENST00000487109 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.22■□□□□ 0.032e-6■■■■■ 151.5
ABCA2-218ENST00000487109 AMOTL1Q8IY63 956 aa15.22■□□□□ 0.03
ABCA2-218ENST00000487109 FOXD4L5Q5VV16 416 aaPredicted RBP15.22■□□□□ 0.03
ABCA2-218ENST00000487109 FOXD4L4Q8WXT5 416 aaPredicted RBP15.22■□□□□ 0.03
ABCA2-218ENST00000487109 SMC4Q9NTJ3 1288 aa15.21■□□□□ 0.03
ABCA2-218ENST00000487109 SMARCA4P51532 1647 aa15.21■□□□□ 0.03
ABCA2-218ENST00000487109 RAD21O60216 631 aa15.21■□□□□ 0.03
ABCA2-218ENST00000487109 IPO7O95373 1038 aaKnown RBP15.21■□□□□ 0.02
ABCA2-218ENST00000487109 HSP90AA2PQ14568 343 aaPredicted RBP15.2■□□□□ 0.02
ABCA2-218ENST00000487109 CHMP4CQ96CF2 233 aa15.2■□□□□ 0.02
ABCA2-218ENST00000487109 BECN2A8MW95 431 aa15.2■□□□□ 0.02
ABCA2-218ENST00000487109 NOL10Q9BSC4 688 aaKnown RBP15.2■□□□□ 0.02
ABCA2-218ENST00000487109 RCAN3Q9UKA8 241 aa15.2■□□□□ 0.02
ABCA2-218ENST00000487109 ZNF771Q7L3S4 317 aaPredicted RBP15.2■□□□□ 0.02
ABCA2-218ENST00000487109 SYNE3Q6ZMZ3 975 aa15.2■□□□□ 0.02
ABCA2-218ENST00000487109 NGDNQ8NEJ9 315 aaKnown RBP15.2■□□□□ 0.02
ABCA2-218ENST00000487109 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.19■□□□□ 0.02
ABCA2-218ENST00000487109 RAB3GAP2Q9H2M9 1393 aa15.18■□□□□ 0.02
ABCA2-218ENST00000487109 TEX35Q5T0J7 233 aa15.18■□□□□ 0.02
ABCA2-218ENST00000487109 CWC22Q9HCG8 908 aaKnown RBP15.18■□□□□ 0.02
ABCA2-218ENST00000487109 ANKRD20A12PQ8NF67 263 aa15.18■□□□□ 0.02
ABCA2-218ENST00000487109 CCDC47Q96A33 483 aaKnown RBP15.18■□□□□ 0.02
ABCA2-218ENST00000487109 ODF2Q5BJF6 829 aa15.17■□□□□ 0.02
ABCA2-218ENST00000487109 RBM19Q9Y4C8 960 aaKnown RBP15.17■□□□□ 0.02
ABCA2-218ENST00000487109 DDX11L8A8MPP1 907 aa15.17■□□□□ 0.02
ABCA2-218ENST00000487109 ZNF592Q92610 1267 aa15.16■□□□□ 0.02
ABCA2-218ENST00000487109 AMPHP49418 695 aa15.16■□□□□ 0.02
ABCA2-218ENST00000487109 JPH4Q96JJ6 628 aa15.16■□□□□ 0.02
ABCA2-218ENST00000487109 ATP6V1DQ9Y5K8 247 aa15.16■□□□□ 0.02
ABCA2-218ENST00000487109 PDE3BQ13370 1112 aa15.16■□□□□ 0.02
ABCA2-218ENST00000487109 TRIM29Q14134 588 aa15.16■□□□□ 0.02
ABCA2-218ENST00000487109 MCTP1Q6DN14 999 aa15.16■□□□□ 0.02
ABCA2-218ENST00000487109 CCDC43Q96MW1 224 aaKnown RBP15.16■□□□□ 0.02
ABCA2-218ENST00000487109 RUFY1Q96T51 708 aa15.16■□□□□ 0.02
ABCA2-218ENST00000487109 CCDC144AA2RUR9 1427 aa15.15■□□□□ 0.02
ABCA2-218ENST00000487109 HOOK1Q9UJC3 728 aaKnown RBP15.15■□□□□ 0.02
ABCA2-218ENST00000487109 LRRFIP1Q32MZ4 808 aaKnown RBP15.15■□□□□ 0.02
ABCA2-218ENST00000487109 AK7Q96M32 723 aa15.14■□□□□ 0.01
ABCA2-218ENST00000487109 CT47A1Q5JQC4 288 aaPredicted RBP15.14■□□□□ 0.01
ABCA2-218ENST00000487109 RILPL2Q969X0 211 aa15.14■□□□□ 0.01
ABCA2-218ENST00000487109 VGFO15240 615 aaPredicted RBP15.13■□□□□ 0.01
ABCA2-218ENST00000487109 CDR1P51861 262 aa15.13■□□□□ 0.01
ABCA2-218ENST00000487109 FANCD2Q9BXW9 1451 aa15.13■□□□□ 0.01
ABCA2-218ENST00000487109 MSH5O43196 834 aa15.13■□□□□ 0.01
ABCA2-218ENST00000487109 HNRNPMP52272 730 aaKnown RBP eCLIP15.12■□□□□ 0.01
ABCA2-218ENST00000487109 NLRP13Q86W25 1043 aa15.12■□□□□ 0.01
ABCA2-218ENST00000487109 ATAD2BQ9ULI0 1458 aa15.12■□□□□ 0.01
ABCA2-218ENST00000487109 KIF15Q9NS87 1388 aa15.11■□□□□ 0.01
ABCA2-218ENST00000487109 NAP1L1P55209 391 aaKnown RBP15.11■□□□□ 0.01
ABCA2-218ENST00000487109 FOXD4L6Q3SYB3 417 aaPredicted RBP15.11■□□□□ 0.01
ABCA2-218ENST00000487109 CPLX2Q6PUV4 134 aaKnown RBP15.11■□□□□ 0.01
ABCA2-218ENST00000487109 FOXD4L3Q6VB84 417 aaPredicted RBP15.11■□□□□ 0.01
ABCA2-218ENST00000487109 MAP7D2Q96T17 732 aa15.1■□□□□ 0.01
ABCA2-218ENST00000487109 FHOD3Q2V2M9 1422 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms