RNA–Protein interactions for RNA: ENST00000486934.1

TRA2A-207, Transcript of transformer 2 alpha homolog, humanhuman

TSL 2

Gene TRA2A, Length 417 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-207ENST00000486934 MRPL50Q8N5N7 158 aaKnown RBP13.28□□□□□ -0.28
TRA2A-207ENST00000486934 WNT2BQ93097 391 aa13.28□□□□□ -0.28
TRA2A-207ENST00000486934 ARIH1Q9Y4X5 557 aaPredicted RBP13.28□□□□□ -0.28
TRA2A-207ENST00000486934 IFFO2Q5TF58 517 aa13.27□□□□□ -0.29
TRA2A-207ENST00000486934 ANO8Q9HCE9 1232 aaPredicted RBP13.26□□□□□ -0.29
TRA2A-207ENST00000486934 RGS20O76081 388 aa13.25□□□□□ -0.29
TRA2A-207ENST00000486934 JPH4Q96JJ6 628 aa13.25□□□□□ -0.29
TRA2A-207ENST00000486934 EVI5O60447 810 aa13.24□□□□□ -0.29
TRA2A-207ENST00000486934 ZDHHC16Q969W1 377 aa13.24□□□□□ -0.29
TRA2A-207ENST00000486934 MAP3K9P80192 1104 aa13.23□□□□□ -0.29
TRA2A-207ENST00000486934 ADAM33Q9BZ11 813 aa13.23□□□□□ -0.29
TRA2A-207ENST00000486934 A0A0G2JS52 829 aa13.21□□□□□ -0.29
TRA2A-207ENST00000486934 ARHGEF1Q92888 912 aaKnown RBP13.21□□□□□ -0.29
TRA2A-207ENST00000486934 PDIA6Q15084 440 aa13.2□□□□□ -0.3
TRA2A-207ENST00000486934 IRX2Q9BZI1 471 aaPredicted RBP13.2□□□□□ -0.3
TRA2A-207ENST00000486934 NBPF3Q9H094 633 aa13.2□□□□□ -0.3
TRA2A-207ENST00000486934 P3H3Q8IVL6 736 aa13.15□□□□□ -0.3
TRA2A-207ENST00000486934 PRIM1P49642 420 aaKnown RBP13.13□□□□□ -0.31
TRA2A-207ENST00000486934 SEMA3EO15041 775 aa13.12□□□□□ -0.31
TRA2A-207ENST00000486934 MLLT3P42568 568 aaPredicted RBP13.12□□□□□ -0.31
TRA2A-207ENST00000486934 SPDYE16A6NNV3 312 aaPredicted RBP13.1□□□□□ -0.31
TRA2A-207ENST00000486934 PPP1R3GB7ZBB8 358 aa13.1□□□□□ -0.31
TRA2A-207ENST00000486934 PROX2Q3B8N5 592 aa13.1□□□□□ -0.31
TRA2A-207ENST00000486934 DDX12PQ92771 950 aa13.1□□□□□ -0.31
TRA2A-207ENST00000486934 RABGEF1Q9UJ41 708 aa13.1□□□□□ -0.31
TRA2A-207ENST00000486934 ANKK1Q8NFD2 765 aa13.09□□□□□ -0.31
TRA2A-207ENST00000486934 PCDHGA10Q9Y5H3 936 aa13.09□□□□□ -0.31
TRA2A-207ENST00000486934 COL9A1P20849 921 aa13.07□□□□□ -0.32
TRA2A-207ENST00000486934 BCAMP50895 628 aa13.04□□□□□ -0.32
TRA2A-207ENST00000486934 TESPA1A2RU30 521 aaPredicted RBP13.03□□□□□ -0.32
TRA2A-207ENST00000486934 ITGBL1O95965 494 aaPredicted RBP13.03□□□□□ -0.32
TRA2A-207ENST00000486934 GRXCR2A6NFK2 248 aa13.02□□□□□ -0.33
TRA2A-207ENST00000486934 OSBPP22059 807 aa13.01□□□□□ -0.33
TRA2A-207ENST00000486934 TYW1BQ6NUM6 668 aa13.01□□□□□ -0.33
TRA2A-207ENST00000486934 SOWAHBA6NEL2 793 aa13□□□□□ -0.33
TRA2A-207ENST00000486934 PHF14O94880 888 aa13□□□□□ -0.33
TRA2A-207ENST00000486934 LAPTM4BQ86VI4 370 aa13□□□□□ -0.33
TRA2A-207ENST00000486934 FBXW7Q969H0 707 aa13□□□□□ -0.33
TRA2A-207ENST00000486934 KIAA1468Q9P260 1216 aa13□□□□□ -0.33
TRA2A-207ENST00000486934 ZFRQ96KR1 1074 aaKnown RBP12.98□□□□□ -0.33
TRA2A-207ENST00000486934 NBR1Q14596 966 aa12.97□□□□□ -0.33
TRA2A-207ENST00000486934 RBM33Q96EV2 1170 aaKnown RBP12.95□□□□□ -0.34
TRA2A-207ENST00000486934 WBP1LQ9NX94 342 aa12.95□□□□□ -0.34
TRA2A-207ENST00000486934 TSR1Q2NL82 804 aaKnown RBP12.94□□□□□ -0.34
TRA2A-207ENST00000486934 NYAP1Q6ZVC0 841 aa12.94□□□□□ -0.34
TRA2A-207ENST00000486934 SEPT9Q9UHD8 586 aaPredicted RBP12.94□□□□□ -0.34
TRA2A-207ENST00000486934 EN1Q05925 392 aaPredicted RBP12.93□□□□□ -0.34
TRA2A-207ENST00000486934 Q6ZNB5 142 aa12.93□□□□□ -0.34
TRA2A-207ENST00000486934 KCNC4Q03721 635 aa12.92□□□□□ -0.34
TRA2A-207ENST00000486934 C6orf132Q5T0Z8 1188 aa12.92□□□□□ -0.34
TRA2A-207ENST00000486934 EPAS1Q99814 870 aa12.92□□□□□ -0.34
TRA2A-207ENST00000486934 CDHR5Q9HBB8 845 aa12.92□□□□□ -0.34
TRA2A-207ENST00000486934 ONECUT3O60422 494 aaPredicted RBP12.91□□□□□ -0.34
TRA2A-207ENST00000486934 RBM26Q5T8P6 1007 aaKnown RBP12.9□□□□□ -0.34
TRA2A-207ENST00000486934 TRIM6-TRIM34B2RNG4 842 aa12.87□□□□□ -0.35
TRA2A-207ENST00000486934 FAM98CQ17RN3 349 aaKnown RBP12.86□□□□□ -0.35
TRA2A-207ENST00000486934 MAP3K7O43318 606 aa12.85□□□□□ -0.35
TRA2A-207ENST00000486934 NPDC1Q9NQX5 325 aaPredicted RBP12.85□□□□□ -0.35
TRA2A-207ENST00000486934 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.85□□□□□ -0.35
TRA2A-207ENST00000486934 TSR3Q9UJK0 312 aaKnown RBP12.85□□□□□ -0.35
TRA2A-207ENST00000486934 LRCH3Q96II8 777 aa12.84□□□□□ -0.35
TRA2A-207ENST00000486934 HPS5Q9UPZ3 1129 aa12.84□□□□□ -0.35
TRA2A-207ENST00000486934 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.83□□□□□ -0.36
TRA2A-207ENST00000486934 GPR37O15354 613 aa12.82□□□□□ -0.36
TRA2A-207ENST00000486934 FAM198AQ9UFP1 575 aa12.78□□□□□ -0.36
TRA2A-207ENST00000486934 C3orf80F5H4A9 247 aa12.76□□□□□ -0.37
TRA2A-207ENST00000486934 BCANQ96GW7 911 aa12.76□□□□□ -0.37
TRA2A-207ENST00000486934 PTGDRQ13258 359 aa12.75□□□□□ -0.37
TRA2A-207ENST00000486934 LAPTM4AQ15012 233 aa12.75□□□□□ -0.37
TRA2A-207ENST00000486934 PACS2Q86VP3 889 aa12.75□□□□□ -0.37
TRA2A-207ENST00000486934 TSKSQ9UJT2 592 aa12.75□□□□□ -0.37
TRA2A-207ENST00000486934 NUTM2FA1L443 756 aa12.74□□□□□ -0.37
TRA2A-207ENST00000486934 PPP4CP60510 307 aa12.74□□□□□ -0.37
TRA2A-207ENST00000486934 SMYD5Q6GMV2 418 aa12.74□□□□□ -0.37
TRA2A-207ENST00000486934 LMOD2Q6P5Q4 547 aa12.74□□□□□ -0.37
TRA2A-207ENST00000486934 GFRA3O60609 400 aa12.72□□□□□ -0.37
TRA2A-207ENST00000486934 FECHP22830 423 aa12.71□□□□□ -0.37
TRA2A-207ENST00000486934 LCE2BO14633 110 aa12.69□□□□□ -0.38
TRA2A-207ENST00000486934 TTC13Q8NBP0 860 aa12.69□□□□□ -0.38
TRA2A-207ENST00000486934 TJAP1Q5JTD0 557 aa12.68□□□□□ -0.38
TRA2A-207ENST00000486934 TRAF7Q6Q0C0 670 aa12.68□□□□□ -0.38
TRA2A-207ENST00000486934 CDCA7LQ96GN5 454 aa12.68□□□□□ -0.38
TRA2A-207ENST00000486934 SMAPO00193 183 aa12.67□□□□□ -0.38
TRA2A-207ENST00000486934 PRSS12P56730 875 aa12.67□□□□□ -0.38
TRA2A-207ENST00000486934 PADI6Q6TGC4 694 aa12.67□□□□□ -0.38
TRA2A-207ENST00000486934 SAMD7Q7Z3H4 446 aa12.67□□□□□ -0.38
TRA2A-207ENST00000486934 GPIHBP1Q8IV16 184 aa12.67□□□□□ -0.38
TRA2A-207ENST00000486934 PRKD2Q9BZL6 878 aa12.66□□□□□ -0.38
TRA2A-207ENST00000486934 FCHSD2O94868 740 aa12.64□□□□□ -0.39
TRA2A-207ENST00000486934 FAM161AQ3B820 660 aa12.63□□□□□ -0.39
TRA2A-207ENST00000486934 MTRQ99707 1265 aa12.63□□□□□ -0.39
TRA2A-207ENST00000486934 CERKQ8TCT0 537 aa12.62□□□□□ -0.39
TRA2A-207ENST00000486934 ZC3H15Q8WU90 426 aaKnown RBP12.62□□□□□ -0.39
TRA2A-207ENST00000486934 PPP1R18Q6NYC8 613 aa12.61□□□□□ -0.39
TRA2A-207ENST00000486934 IL21Q9HBE4 155 aa12.61□□□□□ -0.39
TRA2A-207ENST00000486934 NRG2O14511 850 aaPredicted RBP12.59□□□□□ -0.39
TRA2A-207ENST00000486934 GNPATO15228 680 aa12.59□□□□□ -0.39
TRA2A-207ENST00000486934 HIC1Q14526 733 aa12.59□□□□□ -0.39
TRA2A-207ENST00000486934 RBM27Q9P2N5 1060 aaKnown RBP12.59□□□□□ -0.39
TRA2A-207ENST00000486934 PNMA3Q9UL41 463 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms