RNA–Protein interactions for RNA: ENST00000486889.1

CTPS1-210, Transcript of CTP synthase 1, humanhuman

TSL 2

Gene CTPS1, Length 568 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1-210ENST00000486889 ABCA6Q8N139 1617 aa14.44□□□□□ -0.1
CTPS1-210ENST00000486889 EIF2AK4Q9P2K8 1649 aaKnown RBP14.43□□□□□ -0.1
CTPS1-210ENST00000486889 GCC2Q8IWJ2 1684 aa14.42□□□□□ -0.1
CTPS1-210ENST00000486889 TRIM52Q96A61 297 aa14.42□□□□□ -0.1
CTPS1-210ENST00000486889 NAIPQ13075 1403 aa14.41□□□□□ -0.1
CTPS1-210ENST00000486889 AGLP35573 1532 aa14.41□□□□□ -0.1
CTPS1-210ENST00000486889 GGT6Q6P531 493 aa14.4□□□□□ -0.1
CTPS1-210ENST00000486889 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.39□□□□□ -0.11
CTPS1-210ENST00000486889 WASHC2CQ9Y4E1 1318 aa14.38□□□□□ -0.11
CTPS1-210ENST00000486889 FAM135AQ9P2D6 1515 aa14.36□□□□□ -0.11
CTPS1-210ENST00000486889 RAB3GAP2Q9H2M9 1393 aa14.36□□□□□ -0.11
CTPS1-210ENST00000486889 MLECQ14165 292 aa14.36□□□□□ -0.11
CTPS1-210ENST00000486889 NUP155O75694 1391 aa14.35□□□□□ -0.11
CTPS1-210ENST00000486889 BCORL1Q5H9F3 1711 aa14.35□□□□□ -0.11
CTPS1-210ENST00000486889 CNTLNQ9NXG0 1405 aa14.34□□□□□ -0.11
CTPS1-210ENST00000486889 PTPRMP28827 1452 aa14.32□□□□□ -0.12
CTPS1-210ENST00000486889 SLC4A1APQ9BWU0 796 aaKnown RBP14.32□□□□□ -0.12
CTPS1-210ENST00000486889 RNF17Q9BXT8 1623 aaKnown RBP14.32□□□□□ -0.12
CTPS1-210ENST00000486889 ADAMTSL3P82987 1691 aa14.3□□□□□ -0.12
CTPS1-210ENST00000486889 ZC3H13Q5T200 1668 aaKnown RBP14.3□□□□□ -0.12
CTPS1-210ENST00000486889 PRDM15P57071 1507 aaPredicted RBP14.3□□□□□ -0.12
CTPS1-210ENST00000486889 KDM5DQ9BY66 1539 aa14.3□□□□□ -0.12
CTPS1-210ENST00000486889 UNC13BO14795 1591 aa14.3□□□□□ -0.12
CTPS1-210ENST00000486889 DEPDC5O75140 1603 aa14.3□□□□□ -0.12
CTPS1-210ENST00000486889 MADDQ8WXG6 1647 aa14.3□□□□□ -0.12
CTPS1-210ENST00000486889 RIMS1Q86UR5 1692 aaKnown RBP14.28□□□□□ -0.12
CTPS1-210ENST00000486889 ILDR1Q86SU0 546 aaPredicted RBP14.26□□□□□ -0.13
CTPS1-210ENST00000486889 MPHOSPH9Q99550 1183 aa14.26□□□□□ -0.13
CTPS1-210ENST00000486889 IQGAP3Q86VI3 1631 aa14.25□□□□□ -0.13
CTPS1-210ENST00000486889 LMTK2Q8IWU2 1503 aa14.24□□□□□ -0.13
CTPS1-210ENST00000486889 FER1L4A9Z1Z3 1794 aa14.24□□□□□ -0.13
CTPS1-210ENST00000486889 RPRD2Q5VT52 1461 aaKnown RBP14.24□□□□□ -0.13
CTPS1-210ENST00000486889 PKD2Q13563 968 aa14.23□□□□□ -0.13
CTPS1-210ENST00000486889 TET3O43151 1660 aa14.23□□□□□ -0.13
CTPS1-210ENST00000486889 ZMYM3Q14202 1370 aa14.22□□□□□ -0.13
CTPS1-210ENST00000486889 ABCC3O15438 1527 aa14.22□□□□□ -0.13
CTPS1-210ENST00000486889 CCER1Q8TC90 406 aaPredicted RBP14.22□□□□□ -0.13
CTPS1-210ENST00000486889 MROH2AA6NES4 1674 aa14.22□□□□□ -0.13
CTPS1-210ENST00000486889 ARHGAP31Q2M1Z3 1444 aa14.22□□□□□ -0.13
CTPS1-210ENST00000486889 CLTCQ00610 1675 aaKnown RBP14.21□□□□□ -0.13
CTPS1-210ENST00000486889 VWDEQ8N2E2 1590 aa14.21□□□□□ -0.14
CTPS1-210ENST00000486889 MROH1Q8NDA8 1641 aa14.2□□□□□ -0.14
CTPS1-210ENST00000486889 CAMSAP1Q5T5Y3 1602 aa14.19□□□□□ -0.14
CTPS1-210ENST00000486889 CEP152O94986 1710 aa14.19□□□□□ -0.14
CTPS1-210ENST00000486889 EFCAB6Q5THR3 1501 aa14.19□□□□□ -0.14
CTPS1-210ENST00000486889 SIGLEC1Q9BZZ2 1709 aa14.18□□□□□ -0.14
CTPS1-210ENST00000486889 CLSPNQ9HAW4 1339 aa14.18□□□□□ -0.14
CTPS1-210ENST00000486889 HSPA2P54652 639 aa14.18□□□□□ -0.14
CTPS1-210ENST00000486889 PZPP20742 1482 aa14.18□□□□□ -0.14
CTPS1-210ENST00000486889 SLC52A1Q9NWF4 448 aa14.17□□□□□ -0.14
CTPS1-210ENST00000486889 STAG3Q9UJ98 1225 aa14.17□□□□□ -0.14
CTPS1-210ENST00000486889 CEBPAP49715 358 aaPredicted RBP14.16□□□□□ -0.14
CTPS1-210ENST00000486889 NPATQ14207 1427 aa14.15□□□□□ -0.14
CTPS1-210ENST00000486889 CCDC144AA2RUR9 1427 aa14.15□□□□□ -0.14
CTPS1-210ENST00000486889 LMTK3Q96Q04 1460 aa14.14□□□□□ -0.15
CTPS1-210ENST00000486889 DHX57Q6P158 1386 aaKnown RBP14.13□□□□□ -0.15
CTPS1-210ENST00000486889 HDGFP51858 240 aaKnown RBP14.13□□□□□ -0.15
CTPS1-210ENST00000486889 TNRQ92752 1358 aa14.12□□□□□ -0.15
CTPS1-210ENST00000486889 E9PCH4 1651 aa14.12□□□□□ -0.15
CTPS1-210ENST00000486889 C3P01024 1663 aa14.11□□□□□ -0.15
CTPS1-210ENST00000486889 ERVK-7P63135 1459 aa14.1□□□□□ -0.15
CTPS1-210ENST00000486889 NLRP1Q9C000 1473 aa14.1□□□□□ -0.15
CTPS1-210ENST00000486889 SPHKAPQ2M3C7 1700 aa14.1□□□□□ -0.15
CTPS1-210ENST00000486889 CHGAP10645 457 aaKnown RBP14.09□□□□□ -0.15
CTPS1-210ENST00000486889 FOXD1Q16676 465 aa14.09□□□□□ -0.15
CTPS1-210ENST00000486889 FBXO31Q5XUX0 539 aaPredicted RBP14.09□□□□□ -0.15
CTPS1-210ENST00000486889 PREX1Q8TCU6 1659 aa14.09□□□□□ -0.15
CTPS1-210ENST00000486889 TRPM2O94759 1503 aa14.09□□□□□ -0.15
CTPS1-210ENST00000486889 SPATA31D1Q6ZQQ2 1576 aa14.09□□□□□ -0.15
CTPS1-210ENST00000486889 PTPRTO14522 1441 aa14.08□□□□□ -0.15
CTPS1-210ENST00000486889 NOS1P29475 1434 aa14.08□□□□□ -0.15
CTPS1-210ENST00000486889 UHRF1BP1Q6BDS2 1440 aa14.07□□□□□ -0.16
CTPS1-210ENST00000486889 SETD1BQ9UPS6 1966 aaKnown RBP14.07□□□□□ -0.16
CTPS1-210ENST00000486889 THEMISQ8N1K5 641 aaPredicted RBP14.07□□□□□ -0.16
CTPS1-210ENST00000486889 FBXO41Q8TF61 875 aa14.07□□□□□ -0.16
CTPS1-210ENST00000486889 ANKRD30BQ9BXX2 1392 aa14.07□□□□□ -0.16
CTPS1-210ENST00000486889 CFAP65Q6ZU64 1925 aaKnown RBP14.06□□□□□ -0.16
CTPS1-210ENST00000486889 ZNF326Q5BKZ1 582 aaKnown RBP14.06□□□□□ -0.16
CTPS1-210ENST00000486889 STAC3Q96MF2 364 aa14.06□□□□□ -0.16
CTPS1-210ENST00000486889 TIMELESSQ9UNS1 1208 aa14.06□□□□□ -0.16
CTPS1-210ENST00000486889 NEUROD1Q13562 356 aa14.05□□□□□ -0.16
CTPS1-210ENST00000486889 IDI1Q13907 227 aa14.04□□□□□ -0.16
CTPS1-210ENST00000486889 EID1Q9Y6B2 187 aa14.04□□□□□ -0.16
CTPS1-210ENST00000486889 TONSLQ96HA7 1378 aa14.04□□□□□ -0.16
CTPS1-210ENST00000486889 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.03□□□□□ -0.16
CTPS1-210ENST00000486889 DMRT2Q9Y5R5 561 aa14.03□□□□□ -0.16
CTPS1-210ENST00000486889 RPGRIP1LQ68CZ1 1315 aa14.03□□□□□ -0.16
CTPS1-210ENST00000486889 KIF1BO60333 1816 aa14.03□□□□□ -0.16
CTPS1-210ENST00000486889 ZEB1P37275 1124 aaPredicted RBP14.02□□□□□ -0.17
CTPS1-210ENST00000486889 A2ML1A8K2U0 1454 aa14.01□□□□□ -0.17
CTPS1-210ENST00000486889 UGGT1Q9NYU2 1555 aa14□□□□□ -0.17
CTPS1-210ENST00000486889 PPP1R15AO75807 674 aaPredicted RBP14□□□□□ -0.17
CTPS1-210ENST00000486889 KDM5AP29375 1690 aaKnown RBP14□□□□□ -0.17
CTPS1-210ENST00000486889 MYO3AQ8NEV4 1616 aa14□□□□□ -0.17
CTPS1-210ENST00000486889 SYNMO15061 1565 aa14□□□□□ -0.17
CTPS1-210ENST00000486889 VGFO15240 615 aaPredicted RBP13.99□□□□□ -0.17
CTPS1-210ENST00000486889 RGL3Q3MIN7 710 aa13.99□□□□□ -0.17
CTPS1-210ENST00000486889 PIK3C2BO00750 1634 aa13.99□□□□□ -0.17
CTPS1-210ENST00000486889 PLA2R1Q13018 1463 aa13.99□□□□□ -0.17
CTPS1-210ENST00000486889 NEURL4Q96JN8 1562 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms