RNA–Protein interactions for RNA: ENST00000486810.5

COPS3-209, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 938 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-209ENST00000486810 RBM26Q5T8P6 1007 aaKnown RBP11.17□□□□□ -0.62
COPS3-209ENST00000486810 CDHR5Q9HBB8 845 aa11.17□□□□□ -0.62
COPS3-209ENST00000486810 COL9A1P20849 921 aa11.16□□□□□ -0.62
COPS3-209ENST00000486810 DMRTA1Q5VZB9 504 aa11.16□□□□□ -0.62
COPS3-209ENST00000486810 ARHGAP33O14559 1287 aa11.15□□□□□ -0.62
COPS3-209ENST00000486810 MAP3K7O43318 606 aa11.15□□□□□ -0.62
COPS3-209ENST00000486810 KCNK17Q96T54 332 aa11.15□□□□□ -0.62
COPS3-209ENST00000486810 PBX2P40425 430 aa11.14□□□□□ -0.63
COPS3-209ENST00000486810 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.14□□□□□ -0.63
COPS3-209ENST00000486810 PTPREP23469 700 aa11.13□□□□□ -0.63
COPS3-209ENST00000486810 BCANQ96GW7 911 aa11.13□□□□□ -0.63
COPS3-209ENST00000486810 NPDC1Q9NQX5 325 aaPredicted RBP11.13□□□□□ -0.63
COPS3-209ENST00000486810 SMYD5Q6GMV2 418 aa11.12□□□□□ -0.63
COPS3-209ENST00000486810 PPP1R3GB7ZBB8 358 aa11.09□□□□□ -0.63
COPS3-209ENST00000486810 GPR37O15354 613 aa11.09□□□□□ -0.63
COPS3-209ENST00000486810 LSM11P83369 360 aaKnown RBP eCLIP11.09□□□□□ -0.63
COPS3-209ENST00000486810 ZBED2Q9BTP6 218 aa11.08□□□□□ -0.64
COPS3-209ENST00000486810 LMOD2Q6P5Q4 547 aa11.07□□□□□ -0.64
COPS3-209ENST00000486810 PTGDRQ13258 359 aa11.06□□□□□ -0.64
COPS3-209ENST00000486810 PCDH10Q9P2E7 1040 aa11.06□□□□□ -0.64
COPS3-209ENST00000486810 NUTM2FA1L443 756 aa11.05□□□□□ -0.64
COPS3-209ENST00000486810 PROX2Q3B8N5 592 aa11.05□□□□□ -0.64
COPS3-209ENST00000486810 FAM198AQ9UFP1 575 aa11.04□□□□□ -0.64
COPS3-209ENST00000486810 ANKRD13DQ6ZTN6 518 aa11.03□□□□□ -0.64
COPS3-209ENST00000486810 SLC4A5Q9BY07 1137 aa11.03□□□□□ -0.64
COPS3-209ENST00000486810 VPS9D1Q9Y2B5 631 aa11.03□□□□□ -0.64
COPS3-209ENST00000486810 ADGRD1Q6QNK2 874 aa11.02□□□□□ -0.65
COPS3-209ENST00000486810 TSKSQ9UJT2 592 aa11.02□□□□□ -0.65
COPS3-209ENST00000486810 TK2O00142 265 aa11.01□□□□□ -0.65
COPS3-209ENST00000486810 GPIHBP1Q8IV16 184 aa11.01□□□□□ -0.65
COPS3-209ENST00000486810 KCNH8Q96L42 1107 aa11.01□□□□□ -0.65
COPS3-209ENST00000486810 C3orf80F5H4A9 247 aa11□□□□□ -0.65
COPS3-209ENST00000486810 TULP1O00294 542 aaPredicted RBP11□□□□□ -0.65
COPS3-209ENST00000486810 HRO43593 1189 aa11□□□□□ -0.65
COPS3-209ENST00000486810 FECHP22830 423 aa11□□□□□ -0.65
COPS3-209ENST00000486810 PRSS12P56730 875 aa11□□□□□ -0.65
COPS3-209ENST00000486810 TTC13Q8NBP0 860 aa11□□□□□ -0.65
COPS3-209ENST00000486810 CERKQ8TCT0 537 aa11□□□□□ -0.65
COPS3-209ENST00000486810 CDCA7LQ96GN5 454 aa11□□□□□ -0.65
COPS3-209ENST00000486810 TRIM6-TRIM34B2RNG4 842 aa10.99□□□□□ -0.65
COPS3-209ENST00000486810 BHMG1C9JSJ3 638 aaPredicted RBP10.98□□□□□ -0.65
COPS3-209ENST00000486810 FCHSD2O94868 740 aa10.98□□□□□ -0.65
COPS3-209ENST00000486810 PADI6Q6TGC4 694 aa10.98□□□□□ -0.65
COPS3-209ENST00000486810 ONECUT3O60422 494 aaPredicted RBP10.96□□□□□ -0.65
COPS3-209ENST00000486810 ZC3H15Q8WU90 426 aaKnown RBP10.96□□□□□ -0.65
COPS3-209ENST00000486810 RBM27Q9P2N5 1060 aaKnown RBP10.96□□□□□ -0.65
COPS3-209ENST00000486810 HIC1Q14526 733 aa10.95□□□□□ -0.66
COPS3-209ENST00000486810 KIAA1468Q9P260 1216 aa10.95□□□□□ -0.66
COPS3-209ENST00000486810 SPNS2Q8IVW8 549 aa10.94□□□□□ -0.66
COPS3-209ENST00000486810 RABGEF1Q9UJ41 708 aa10.94□□□□□ -0.66
COPS3-209ENST00000486810 GNPATO15228 680 aa10.93□□□□□ -0.66
COPS3-209ENST00000486810 FAM161AQ3B820 660 aa10.91□□□□□ -0.66
COPS3-209ENST00000486810 ZMYND10O75800 440 aa10.9□□□□□ -0.66
COPS3-209ENST00000486810 SMAPO00193 183 aa10.89□□□□□ -0.67
COPS3-209ENST00000486810 PACS2Q86VP3 889 aa10.88□□□□□ -0.67
COPS3-209ENST00000486810 TATDN2Q93075 761 aa10.88□□□□□ -0.67
COPS3-209ENST00000486810 SEPT9Q9UHD8 586 aaPredicted RBP10.88□□□□□ -0.67
COPS3-209ENST00000486810 ADGRG1Q9Y653 693 aa10.88□□□□□ -0.67
COPS3-209ENST00000486810 BARGINQ6ZT62 677 aa10.87□□□□□ -0.67
COPS3-209ENST00000486810 NUDT18Q6ZVK8 323 aa10.87□□□□□ -0.67
COPS3-209ENST00000486810 EYA1Q99502 592 aa10.87□□□□□ -0.67
COPS3-209ENST00000486810 PNMA3Q9UL41 463 aa10.87□□□□□ -0.67
COPS3-209ENST00000486810 NBPF26B4DH59 902 aa10.84□□□□□ -0.67
COPS3-209ENST00000486810 NBPF3Q9H094 633 aa10.84□□□□□ -0.67
COPS3-209ENST00000486810 MAP2K5Q13163 448 aa10.83□□□□□ -0.68
COPS3-209ENST00000486810 MRPL50Q8N5N7 158 aaKnown RBP10.83□□□□□ -0.68
COPS3-209ENST00000486810 LAPTM4BQ86VI4 370 aa10.82□□□□□ -0.68
COPS3-209ENST00000486810 PHOX2BQ99453 314 aa10.82□□□□□ -0.68
COPS3-209ENST00000486810 IRF6O14896 467 aa10.81□□□□□ -0.68
COPS3-209ENST00000486810 MMRN1Q13201 1228 aa10.81□□□□□ -0.68
COPS3-209ENST00000486810 FAM98CQ17RN3 349 aaKnown RBP10.81□□□□□ -0.68
COPS3-209ENST00000486810 PXYLP1Q8TE99 480 aa10.81□□□□□ -0.68
COPS3-209ENST00000486810 MYT1LQ9UL68 1186 aa10.81□□□□□ -0.68
COPS3-209ENST00000486810 METTL3Q86U44 580 aaKnown RBP10.8□□□□□ -0.68
COPS3-209ENST00000486810 ZFRQ96KR1 1074 aaKnown RBP10.8□□□□□ -0.68
COPS3-209ENST00000486810 MINK1Q8N4C8 1332 aaPredicted RBP10.8□□□□□ -0.68
COPS3-209ENST00000486810 CCDC102AQ96A19 550 aa10.79□□□□□ -0.68
COPS3-209ENST00000486810 RBM46Q8TBY0 533 aaKnown RBP10.77□□□□□ -0.69
COPS3-209ENST00000486810 NLRP7Q8WX94 980 aa10.77□□□□□ -0.69
COPS3-209ENST00000486810 STAC3Q96MF2 364 aa10.77□□□□□ -0.69
COPS3-209ENST00000486810 RCCD1A6NED2 376 aa10.76□□□□□ -0.69
COPS3-209ENST00000486810 OATP04181 439 aa10.76□□□□□ -0.69
COPS3-209ENST00000486810 TPRNQ4KMQ1 711 aa10.76□□□□□ -0.69
COPS3-209ENST00000486810 SLC24A3Q9HC58 644 aa10.76□□□□□ -0.69
COPS3-209ENST00000486810 KRI1Q8N9T8 703 aaKnown RBP10.75□□□□□ -0.69
COPS3-209ENST00000486810 RNF166Q96A37 237 aaPredicted RBP10.75□□□□□ -0.69
COPS3-209ENST00000486810 KCTD12Q96CX2 325 aaKnown RBP10.75□□□□□ -0.69
COPS3-209ENST00000486810 SAMD7Q7Z3H4 446 aa10.74□□□□□ -0.69
COPS3-209ENST00000486810 WNT2BQ93097 391 aa10.74□□□□□ -0.69
COPS3-209ENST00000486810 GOLGA8CPA6NN73 597 aa10.72□□□□□ -0.69
COPS3-209ENST00000486810 PRKCSHP14314 528 aaPredicted RBP10.72□□□□□ -0.69
COPS3-209ENST00000486810 DNAJB2P25686 324 aa10.72□□□□□ -0.69
COPS3-209ENST00000486810 BCAMP50895 628 aa10.72□□□□□ -0.69
COPS3-209ENST00000486810 SWT1Q5T5J6 900 aaKnown RBP10.72□□□□□ -0.69
COPS3-209ENST00000486810 THSD4Q6ZMP0 1018 aa10.72□□□□□ -0.69
COPS3-209ENST00000486810 TMEM134Q9H6X4 195 aa10.72□□□□□ -0.69
COPS3-209ENST00000486810 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.71□□□□□ -0.69
COPS3-209ENST00000486810 SOWAHBA6NEL2 793 aa10.71□□□□□ -0.69
COPS3-209ENST00000486810 ANKK1Q8NFD2 765 aa10.7□□□□□ -0.7
COPS3-209ENST00000486810 TRIM66O15016 1216 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms