RNA–Protein interactions for RNA: ENST00000486554.1

TSC22D3-208, Transcript of TSC22 domain family member 3, humanhuman

TSL 2

Gene TSC22D3, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC22D3-208ENST00000486554 FMN1Q68DA7 1419 aa22.83■■□□□ 1.25
TSC22D3-208ENST00000486554 SYCP2Q9BX26 1530 aa22.83■■□□□ 1.25
TSC22D3-208ENST00000486554 ZNF777Q9ULD5 760 aaPredicted RBP22.83■■□□□ 1.25
TSC22D3-208ENST00000486554 FAM135BQ49AJ0 1406 aa22.82■■□□□ 1.24
TSC22D3-208ENST00000486554 FAM135AQ9P2D6 1515 aa22.82■■□□□ 1.24
TSC22D3-208ENST00000486554 UGGT1Q9NYU2 1555 aa22.82■■□□□ 1.24
TSC22D3-208ENST00000486554 TRIM52Q96A61 297 aa22.82■■□□□ 1.24
TSC22D3-208ENST00000486554 SRCAPQ6ZRS2 3230 aa22.8■■□□□ 1.24
TSC22D3-208ENST00000486554 INO80Q9ULG1 1556 aaPredicted RBP22.8■■□□□ 1.24
TSC22D3-208ENST00000486554 CDC42BPAQ5VT25 1732 aa22.79■■□□□ 1.24
TSC22D3-208ENST00000486554 HNRNPMP52272 730 aaKnown RBP eCLIP22.78■■□□□ 1.24
TSC22D3-208ENST00000486554 PZPP20742 1482 aa22.76■■□□□ 1.23
TSC22D3-208ENST00000486554 NLRP1Q9C000 1473 aa22.76■■□□□ 1.23
TSC22D3-208ENST00000486554 LRRIQ1Q96JM4 1722 aa22.75■■□□□ 1.23
TSC22D3-208ENST00000486554 XIRP1Q702N8 1843 aaKnown RBP22.75■■□□□ 1.23
TSC22D3-208ENST00000486554 ROBO1Q9Y6N7 1651 aa22.74■■□□□ 1.23
TSC22D3-208ENST00000486554 ADGBQ8N7X0 1667 aa22.72■■□□□ 1.23
TSC22D3-208ENST00000486554 MIA2Q96PC5 1412 aa22.72■■□□□ 1.23
TSC22D3-208ENST00000486554 ZC3H13Q5T200 1668 aaKnown RBP22.7■■□□□ 1.22
TSC22D3-208ENST00000486554 KDM5DQ9BY66 1539 aa22.68■■□□□ 1.22
TSC22D3-208ENST00000486554 ZNF772Q68DY9 489 aaPredicted RBP22.67■■□□□ 1.22
TSC22D3-208ENST00000486554 JCADQ9P266 1359 aa22.66■■□□□ 1.22
TSC22D3-208ENST00000486554 MEX3CQ5U5Q3 659 aaKnown RBP22.65■■□□□ 1.22
TSC22D3-208ENST00000486554 KIAA1107Q9UPP5 1409 aa22.63■■□□□ 1.21
TSC22D3-208ENST00000486554 PHLPP1O60346 1717 aa22.62■■□□□ 1.21
TSC22D3-208ENST00000486554 ARHGAP35Q9NRY4 1499 aa22.62■■□□□ 1.21
TSC22D3-208ENST00000486554 WASHC2CQ9Y4E1 1318 aa22.61■■□□□ 1.21
TSC22D3-208ENST00000486554 PLEKHH2Q8IVE3 1493 aa22.61■■□□□ 1.21
TSC22D3-208ENST00000486554 RXRBP28702 533 aa22.61■■□□□ 1.21
TSC22D3-208ENST00000486554 LRP6O75581 1613 aa22.6■■□□□ 1.21
TSC22D3-208ENST00000486554 GPATCH8Q9UKJ3 1502 aaKnown RBP22.59■■□□□ 1.21
TSC22D3-208ENST00000486554 KIF3BO15066 747 aa22.59■■□□□ 1.21
TSC22D3-208ENST00000486554 TMEM94Q12767 1356 aa22.59■■□□□ 1.21
TSC22D3-208ENST00000486554 LRRC9Q6ZRR7 1453 aa22.59■■□□□ 1.21
TSC22D3-208ENST00000486554 SCAF11Q99590 1463 aaKnown RBP22.59■■□□□ 1.21
TSC22D3-208ENST00000486554 DHX29Q7Z478 1369 aaKnown RBP22.57■■□□□ 1.2
TSC22D3-208ENST00000486554 CCDC18Q5T9S5 1454 aa22.57■■□□□ 1.2
TSC22D3-208ENST00000486554 EEA1Q15075 1411 aa22.57■■□□□ 1.2
TSC22D3-208ENST00000486554 CDK12Q9NYV4 1490 aaPredicted RBP22.55■■□□□ 1.2
TSC22D3-208ENST00000486554 CHIC1Q5VXU3 224 aa22.54■■□□□ 1.2
TSC22D3-208ENST00000486554 CFDP1Q9UEE9 299 aaPredicted RBP22.54■■□□□ 1.2
TSC22D3-208ENST00000486554 SPATA31A6Q5VVP1 1343 aa22.53■■□□□ 1.2
TSC22D3-208ENST00000486554 MAP3K1Q13233 1512 aa22.52■■□□□ 1.2
TSC22D3-208ENST00000486554 RBM33Q96EV2 1170 aaKnown RBP22.51■■□□□ 1.19
TSC22D3-208ENST00000486554 LTKP29376 864 aa22.49■■□□□ 1.19
TSC22D3-208ENST00000486554 TXNDC2Q86VQ3 553 aa22.49■■□□□ 1.19
TSC22D3-208ENST00000486554 EHMT2Q96KQ7 1210 aa22.49■■□□□ 1.19
TSC22D3-208ENST00000486554 ZRANB1Q9UGI0 708 aa22.49■■□□□ 1.19
TSC22D3-208ENST00000486554 COL16A1Q07092 1604 aaPredicted RBP22.49■■□□□ 1.19
TSC22D3-208ENST00000486554 UBR1Q8IWV7 1749 aa22.48■■□□□ 1.19
TSC22D3-208ENST00000486554 PROSER2Q86WR7 435 aaPredicted RBP22.47■■□□□ 1.19
TSC22D3-208ENST00000486554 RTEL1-TNFRSF6BF6WH68 1400 aa22.47■■□□□ 1.19
TSC22D3-208ENST00000486554 SETBP1Q9Y6X0 1596 aa22.46■■□□□ 1.19
TSC22D3-208ENST00000486554 UBTFP17480 764 aaKnown RBP22.45■■□□□ 1.18
TSC22D3-208ENST00000486554 FOXD1Q16676 465 aa22.45■■□□□ 1.18
TSC22D3-208ENST00000486554 FGD6Q6ZV73 1430 aa22.45■■□□□ 1.18
TSC22D3-208ENST00000486554 CCNB3Q8WWL7 1395 aa22.44■■□□□ 1.18
TSC22D3-208ENST00000486554 SLAIN2Q9P270 581 aa22.44■■□□□ 1.18
TSC22D3-208ENST00000486554 ERVK-7P63135 1459 aa22.43■■□□□ 1.18
TSC22D3-208ENST00000486554 NCOA2Q15596 1464 aa22.43■■□□□ 1.18
TSC22D3-208ENST00000486554 ARHGAP23Q9P227 1491 aa22.43■■□□□ 1.18
TSC22D3-208ENST00000486554 RGS12O14924 1447 aa22.43■■□□□ 1.18
TSC22D3-208ENST00000486554 CASKIN1Q8WXD9 1431 aa22.43■■□□□ 1.18
TSC22D3-208ENST00000486554 MSH6P52701 1360 aa22.43■■□□□ 1.18
TSC22D3-208ENST00000486554 NUTM2BA6NNL0 878 aaPredicted RBP22.43■■□□□ 1.18
TSC22D3-208ENST00000486554 NUTM2EB1AL46 878 aaPredicted RBP22.43■■□□□ 1.18
TSC22D3-208ENST00000486554 NUTM2DQ5VT03 806 aaPredicted RBP22.43■■□□□ 1.18
TSC22D3-208ENST00000486554 NUTM2AQ8IVF1 878 aaPredicted RBP22.43■■□□□ 1.18
TSC22D3-208ENST00000486554 SLIT1O75093 1534 aa22.42■■□□□ 1.18
TSC22D3-208ENST00000486554 EID1Q9Y6B2 187 aa22.42■■□□□ 1.18
TSC22D3-208ENST00000486554 KCNA6P17658 529 aa22.41■■□□□ 1.18
TSC22D3-208ENST00000486554 TIAM1Q13009 1591 aa22.41■■□□□ 1.18
TSC22D3-208ENST00000486554 ZNF644Q9H582 1327 aaPredicted RBP22.4■■□□□ 1.18
TSC22D3-208ENST00000486554 PRDM15P57071 1507 aaPredicted RBP22.39■■□□□ 1.17
TSC22D3-208ENST00000486554 MBD5Q9P267 1494 aa22.39■■□□□ 1.17
TSC22D3-208ENST00000486554 AFF2P51816 1311 aa22.38■■□□□ 1.17
TSC22D3-208ENST00000486554 SHPRHQ149N8 1683 aa22.38■■□□□ 1.17
TSC22D3-208ENST00000486554 ABCC3O15438 1527 aa22.36■■□□□ 1.17
TSC22D3-208ENST00000486554 NKTRP30414 1462 aaKnown RBP22.34■■□□□ 1.17
TSC22D3-208ENST00000486554 ATAD2Q6PL18 1390 aa22.33■■□□□ 1.17
TSC22D3-208ENST00000486554 RBM6P78332 1123 aaKnown RBP22.31■■□□□ 1.16
TSC22D3-208ENST00000486554 SLC26A8Q96RN1 970 aa22.31■■□□□ 1.16
TSC22D3-208ENST00000486554 CFAP65Q6ZU64 1925 aaKnown RBP22.3■■□□□ 1.16
TSC22D3-208ENST00000486554 NWD1Q149M9 1564 aa22.29■■□□□ 1.16
TSC22D3-208ENST00000486554 AHDC1Q5TGY3 1603 aaPredicted RBP22.28■■□□□ 1.16
TSC22D3-208ENST00000486554 QTRT2Q9H974 415 aaKnown RBP22.28■■□□□ 1.16
TSC22D3-208ENST00000486554 FYCO1Q9BQS8 1478 aa22.28■■□□□ 1.16
TSC22D3-208ENST00000486554 TMEM2Q9UHN6 1383 aa22.27■■□□□ 1.16
TSC22D3-208ENST00000486554 KDM5AP29375 1690 aaKnown RBP22.27■■□□□ 1.16
TSC22D3-208ENST00000486554 CCDC141Q6ZP82 1450 aa22.27■■□□□ 1.16
TSC22D3-208ENST00000486554 STAG3Q9UJ98 1225 aa22.23■■□□□ 1.15
TSC22D3-208ENST00000486554 CEP152O94986 1710 aa22.23■■□□□ 1.15
TSC22D3-208ENST00000486554 PIK3C2BO00750 1634 aa22.22■■□□□ 1.15
TSC22D3-208ENST00000486554 C8orf37Q96NL8 207 aa22.22■■□□□ 1.15
TSC22D3-208ENST00000486554 TET3O43151 1660 aa22.22■■□□□ 1.15
TSC22D3-208ENST00000486554 DIP2AQ14689 1571 aa22.21■■□□□ 1.15
TSC22D3-208ENST00000486554 CAMSAP2Q08AD1 1489 aa22.21■■□□□ 1.15
TSC22D3-208ENST00000486554 MTUS2Q5JR59 1369 aa22.2■■□□□ 1.14
TSC22D3-208ENST00000486554 NGLY1Q96IV0 654 aa22.19■■□□□ 1.14
TSC22D3-208ENST00000486554 C14orf37Q86TY3 774 aa22.17■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms