RNA–Protein interactions for RNA: ENST00000486515.1

UBR4-214, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 536 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-214ENST00000486515 CAMSAP1Q5T5Y3 1602 aa10.32□□□□□ -0.76
UBR4-214ENST00000486515 ZFYVE16Q7Z3T8 1539 aa10.32□□□□□ -0.76
UBR4-214ENST00000486515 CROCC2H7BZ55 1655 aa10.31□□□□□ -0.76
UBR4-214ENST00000486515 PPP6R1Q9UPN7 881 aa10.31□□□□□ -0.76
UBR4-214ENST00000486515 ABCC1P33527 1531 aa10.31□□□□□ -0.76
UBR4-214ENST00000486515 ABCC5O15440 1437 aa10.31□□□□□ -0.76
UBR4-214ENST00000486515 C9orf84Q5VXU9 1444 aa10.31□□□□□ -0.76
UBR4-214ENST00000486515 PKD2Q13563 968 aa10.3□□□□□ -0.76
UBR4-214ENST00000486515 TRAPPC8Q9Y2L5 1435 aa10.3□□□□□ -0.76
UBR4-214ENST00000486515 MBD5Q9P267 1494 aa10.3□□□□□ -0.76
UBR4-214ENST00000486515 ROCK1Q13464 1354 aa10.29□□□□□ -0.76
UBR4-214ENST00000486515 RBM33Q96EV2 1170 aaKnown RBP10.29□□□□□ -0.76
UBR4-214ENST00000486515 RTEL1-TNFRSF6BF6WH68 1400 aa10.29□□□□□ -0.76
UBR4-214ENST00000486515 ARHGEF5Q12774 1597 aa10.29□□□□□ -0.76
UBR4-214ENST00000486515 SHANK2Q9UPX8 1470 aa10.29□□□□□ -0.76
UBR4-214ENST00000486515 DNMT1P26358 1616 aaKnown RBP10.28□□□□□ -0.76
UBR4-214ENST00000486515 KIF15Q9NS87 1388 aa10.27□□□□□ -0.76
UBR4-214ENST00000486515 TRIM52Q96A61 297 aa10.27□□□□□ -0.77
UBR4-214ENST00000486515 MAGI2Q86UL8 1455 aa10.27□□□□□ -0.77
UBR4-214ENST00000486515 CPS1P31327 1500 aa10.27□□□□□ -0.77
UBR4-214ENST00000486515 ALKQ9UM73 1620 aa10.26□□□□□ -0.77
UBR4-214ENST00000486515 SETD5Q9C0A6 1442 aa10.26□□□□□ -0.77
UBR4-214ENST00000486515 ZMYM4Q5VZL5 1548 aa10.25□□□□□ -0.77
UBR4-214ENST00000486515 ESF1Q9H501 851 aaKnown RBP10.25□□□□□ -0.77
UBR4-214ENST00000486515 ZRANB1Q9UGI0 708 aa10.25□□□□□ -0.77
UBR4-214ENST00000486515 ADGBQ8N7X0 1667 aa10.25□□□□□ -0.77
UBR4-214ENST00000486515 HFM1A2PYH4 1435 aa10.24□□□□□ -0.77
UBR4-214ENST00000486515 RICTORQ6R327 1708 aa10.24□□□□□ -0.77
UBR4-214ENST00000486515 MLH3Q9UHC1 1453 aa10.24□□□□□ -0.77
UBR4-214ENST00000486515 HRCP23327 699 aa10.24□□□□□ -0.77
UBR4-214ENST00000486515 ANKRD50Q9ULJ7 1429 aa10.24□□□□□ -0.77
UBR4-214ENST00000486515 ADGRL2O95490 1459 aa10.23□□□□□ -0.77
UBR4-214ENST00000486515 KANK1Q14678 1352 aa10.23□□□□□ -0.77
UBR4-214ENST00000486515 ATP10AO60312 1499 aa10.23□□□□□ -0.77
UBR4-214ENST00000486515 ATP7AQ04656 1500 aa10.23□□□□□ -0.77
UBR4-214ENST00000486515 KIF3BO15066 747 aa10.22□□□□□ -0.77
UBR4-214ENST00000486515 FOXD1Q16676 465 aa10.22□□□□□ -0.77
UBR4-214ENST00000486515 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.22□□□□□ -0.77
UBR4-214ENST00000486515 DHX29Q7Z478 1369 aaKnown RBP10.22□□□□□ -0.77
UBR4-214ENST00000486515 RAB3GAP2Q9H2M9 1393 aa10.21□□□□□ -0.78
UBR4-214ENST00000486515 NAIPQ13075 1403 aa10.21□□□□□ -0.78
UBR4-214ENST00000486515 ERBINQ96RT1 1412 aa10.21□□□□□ -0.78
UBR4-214ENST00000486515 PLA2R1Q13018 1463 aa10.21□□□□□ -0.78
UBR4-214ENST00000486515 DUOX2Q9NRD8 1548 aa10.21□□□□□ -0.78
UBR4-214ENST00000486515 MAST1Q9Y2H9 1570 aa10.21□□□□□ -0.78
UBR4-214ENST00000486515 A2MP01023 1474 aa10.2□□□□□ -0.78
UBR4-214ENST00000486515 KDM5CP41229 1560 aa10.2□□□□□ -0.78
UBR4-214ENST00000486515 GGT6Q6P531 493 aa10.2□□□□□ -0.78
UBR4-214ENST00000486515 GCC2Q8IWJ2 1684 aa10.2□□□□□ -0.78
UBR4-214ENST00000486515 CCER1Q8TC90 406 aaPredicted RBP10.2□□□□□ -0.78
UBR4-214ENST00000486515 INO80Q9ULG1 1556 aaPredicted RBP10.2□□□□□ -0.78
UBR4-214ENST00000486515 C3P01024 1663 aa10.18□□□□□ -0.78
UBR4-214ENST00000486515 SETBP1Q9Y6X0 1596 aa10.18□□□□□ -0.78
UBR4-214ENST00000486515 SLC4A1APQ9BWU0 796 aaKnown RBP10.18□□□□□ -0.78
UBR4-214ENST00000486515 PLXNC1O60486 1568 aa10.18□□□□□ -0.78
UBR4-214ENST00000486515 NUP155O75694 1391 aa10.17□□□□□ -0.78
UBR4-214ENST00000486515 WASHC2CQ9Y4E1 1318 aa10.17□□□□□ -0.78
UBR4-214ENST00000486515 ABCA6Q8N139 1617 aa10.17□□□□□ -0.78
UBR4-214ENST00000486515 KIDINS220Q9ULH0 1771 aa10.16□□□□□ -0.78
UBR4-214ENST00000486515 NPATQ14207 1427 aa10.15□□□□□ -0.79
UBR4-214ENST00000486515 LRRC7Q96NW7 1537 aa10.14□□□□□ -0.79
UBR4-214ENST00000486515 ZNF772Q68DY9 489 aaPredicted RBP10.14□□□□□ -0.79
UBR4-214ENST00000486515 RXRBP28702 533 aa10.13□□□□□ -0.79
UBR4-214ENST00000486515 MPHOSPH9Q99550 1183 aa10.13□□□□□ -0.79
UBR4-214ENST00000486515 DIP2CQ9Y2E4 1556 aa10.13□□□□□ -0.79
UBR4-214ENST00000486515 YY1P25490 414 aa10.12□□□□□ -0.79
UBR4-214ENST00000486515 CNTLNQ9NXG0 1405 aa10.09□□□□□ -0.79
UBR4-214ENST00000486515 AGLP35573 1532 aa10.09□□□□□ -0.79
UBR4-214ENST00000486515 EIF2AK4Q9P2K8 1649 aaKnown RBP10.09□□□□□ -0.79
UBR4-214ENST00000486515 REREQ9P2R6 1566 aa10.09□□□□□ -0.79
UBR4-214ENST00000486515 CLSPNQ9HAW4 1339 aa10.08□□□□□ -0.8
UBR4-214ENST00000486515 SENP3-EIF4A1A0A087X0R7 540 aa10.08□□□□□ -0.8
UBR4-214ENST00000486515 RNF17Q9BXT8 1623 aaKnown RBP10.07□□□□□ -0.8
UBR4-214ENST00000486515 VWDEQ8N2E2 1590 aa10.07□□□□□ -0.8
UBR4-214ENST00000486515 CDK12Q9NYV4 1490 aaPredicted RBP10.07□□□□□ -0.8
UBR4-214ENST00000486515 CEP170BQ9Y4F5 1589 aaPredicted RBP10.06□□□□□ -0.8
UBR4-214ENST00000486515 FAM135BQ49AJ0 1406 aa10.06□□□□□ -0.8
UBR4-214ENST00000486515 ZMYM3Q14202 1370 aa10.05□□□□□ -0.8
UBR4-214ENST00000486515 DHX57Q6P158 1386 aaKnown RBP10.05□□□□□ -0.8
UBR4-214ENST00000486515 NUTM2BA6NNL0 878 aaPredicted RBP10.05□□□□□ -0.8
UBR4-214ENST00000486515 NUTM2EB1AL46 878 aaPredicted RBP10.05□□□□□ -0.8
UBR4-214ENST00000486515 ZEB1P37275 1124 aaPredicted RBP10.05□□□□□ -0.8
UBR4-214ENST00000486515 MEX3CQ5U5Q3 659 aaKnown RBP10.05□□□□□ -0.8
UBR4-214ENST00000486515 NUTM2DQ5VT03 806 aaPredicted RBP10.05□□□□□ -0.8
UBR4-214ENST00000486515 NUTM2AQ8IVF1 878 aaPredicted RBP10.05□□□□□ -0.8
UBR4-214ENST00000486515 FAM135AQ9P2D6 1515 aa10.05□□□□□ -0.8
UBR4-214ENST00000486515 UNC13BO14795 1591 aa10.05□□□□□ -0.8
UBR4-214ENST00000486515 CEP152O94986 1710 aa10.04□□□□□ -0.8
UBR4-214ENST00000486515 MROH1Q8NDA8 1641 aa10.04□□□□□ -0.8
UBR4-214ENST00000486515 KDM5DQ9BY66 1539 aa10.04□□□□□ -0.8
UBR4-214ENST00000486515 NEUROD1Q13562 356 aa10.04□□□□□ -0.8
UBR4-214ENST00000486515 STAG3Q9UJ98 1225 aa10.04□□□□□ -0.8
UBR4-214ENST00000486515 DEPDC5O75140 1603 aa10.04□□□□□ -0.8
UBR4-214ENST00000486515 PRDM15P57071 1507 aaPredicted RBP10.03□□□□□ -0.8
UBR4-214ENST00000486515 ZNF142P52746 1687 aaPredicted RBP10.03□□□□□ -0.8
UBR4-214ENST00000486515 CHGAP10645 457 aaKnown RBP10.02□□□□□ -0.81
UBR4-214ENST00000486515 MYO3AQ8NEV4 1616 aa10.02□□□□□ -0.81
UBR4-214ENST00000486515 JCADQ9P266 1359 aa10.01□□□□□ -0.81
UBR4-214ENST00000486515 NEURL4Q96JN8 1562 aa10.01□□□□□ -0.81
UBR4-214ENST00000486515 CCDC144AA2RUR9 1427 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms