RNA–Protein interactions for RNA: ENST00000486028.1

HMG20B-211, Transcript of high mobility group 20B, humanhuman

TSL 2

Gene HMG20B, Length 719 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-211ENST00000486028 ZMYM3Q14202 1370 aa18.99■□□□□ 0.63
HMG20B-211ENST00000486028 WASHC2CQ9Y4E1 1318 aa18.98■□□□□ 0.63
HMG20B-211ENST00000486028 KCNA4P22459 653 aa18.97■□□□□ 0.63
HMG20B-211ENST00000486028 ITGAEP38570 1179 aa18.97■□□□□ 0.63
HMG20B-211ENST00000486028 ADGRL2O95490 1459 aa18.96■□□□□ 0.63
HMG20B-211ENST00000486028 ERBINQ96RT1 1412 aa18.95■□□□□ 0.62
HMG20B-211ENST00000486028 RRBP1Q9P2E9 1410 aaKnown RBP18.95■□□□□ 0.62
HMG20B-211ENST00000486028 PTPRKQ15262 1439 aa18.94■□□□□ 0.62
HMG20B-211ENST00000486028 EIF2AK4Q9P2K8 1649 aaKnown RBP18.92■□□□□ 0.62
HMG20B-211ENST00000486028 MROH2AA6NES4 1674 aa18.92■□□□□ 0.62
HMG20B-211ENST00000486028 ROCK1Q13464 1354 aa18.92■□□□□ 0.62
HMG20B-211ENST00000486028 C3P01024 1663 aa18.92■□□□□ 0.62
HMG20B-211ENST00000486028 CLTCQ00610 1675 aaKnown RBP18.92■□□□□ 0.62
HMG20B-211ENST00000486028 FAM135AQ9P2D6 1515 aa18.91■□□□□ 0.62
HMG20B-211ENST00000486028 SETD1BQ9UPS6 1966 aaKnown RBP18.91■□□□□ 0.62
HMG20B-211ENST00000486028 KDM5DQ9BY66 1539 aa18.9■□□□□ 0.62
HMG20B-211ENST00000486028 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.9■□□□□ 0.628e-7■■□□□ 11.7
HMG20B-211ENST00000486028 NPATQ14207 1427 aa18.9■□□□□ 0.62
HMG20B-211ENST00000486028 RNF17Q9BXT8 1623 aaKnown RBP18.89■□□□□ 0.62
HMG20B-211ENST00000486028 ANKRD50Q9ULJ7 1429 aa18.89■□□□□ 0.61
HMG20B-211ENST00000486028 LMTK3Q96Q04 1460 aa18.89■□□□□ 0.61
HMG20B-211ENST00000486028 KANK1Q14678 1352 aa18.87■□□□□ 0.61
HMG20B-211ENST00000486028 UHRF1BP1Q6BDS2 1440 aa18.87■□□□□ 0.61
HMG20B-211ENST00000486028 HSPA2P54652 639 aa18.85■□□□□ 0.61
HMG20B-211ENST00000486028 ABCC3O15438 1527 aa18.84■□□□□ 0.61
HMG20B-211ENST00000486028 FBXO31Q5XUX0 539 aaPredicted RBP18.84■□□□□ 0.61
HMG20B-211ENST00000486028 MROH1Q8NDA8 1641 aa18.83■□□□□ 0.61
HMG20B-211ENST00000486028 PZPP20742 1482 aa18.83■□□□□ 0.6
HMG20B-211ENST00000486028 PREX1Q8TCU6 1659 aa18.82■□□□□ 0.6
HMG20B-211ENST00000486028 PRDM15P57071 1507 aaPredicted RBP18.81■□□□□ 0.6
HMG20B-211ENST00000486028 ZC3H13Q5T200 1668 aaKnown RBP18.8■□□□□ 0.6
HMG20B-211ENST00000486028 TNRQ92752 1358 aa18.8■□□□□ 0.6
HMG20B-211ENST00000486028 DEPDC5O75140 1603 aa18.79■□□□□ 0.6
HMG20B-211ENST00000486028 ARHGAP31Q2M1Z3 1444 aa18.76■□□□□ 0.59
HMG20B-211ENST00000486028 LMTK2Q8IWU2 1503 aa18.74■□□□□ 0.59
HMG20B-211ENST00000486028 CEP152O94986 1710 aa18.74■□□□□ 0.59
HMG20B-211ENST00000486028 VWDEQ8N2E2 1590 aa18.74■□□□□ 0.59
HMG20B-211ENST00000486028 CAMSAP1Q5T5Y3 1602 aa18.74■□□□□ 0.59
HMG20B-211ENST00000486028 NAIPQ13075 1403 aa18.73■□□□□ 0.59
HMG20B-211ENST00000486028 ERVK-7P63135 1459 aa18.72■□□□□ 0.59
HMG20B-211ENST00000486028 NUP155O75694 1391 aa18.72■□□□□ 0.59
HMG20B-211ENST00000486028 A2ML1A8K2U0 1454 aa18.71■□□□□ 0.59
HMG20B-211ENST00000486028 DMRT2Q9Y5R5 561 aa18.71■□□□□ 0.59
HMG20B-211ENST00000486028 NLRP1Q9C000 1473 aa18.71■□□□□ 0.59
HMG20B-211ENST00000486028 MYO3AQ8NEV4 1616 aa18.71■□□□□ 0.58
HMG20B-211ENST00000486028 HFM1A2PYH4 1435 aa18.7■□□□□ 0.58
HMG20B-211ENST00000486028 UNC13BO14795 1591 aa18.69■□□□□ 0.58
HMG20B-211ENST00000486028 SPATA31D1Q6ZQQ2 1576 aa18.69■□□□□ 0.58
HMG20B-211ENST00000486028 CEP170BQ9Y4F5 1589 aaPredicted RBP18.69■□□□□ 0.58
HMG20B-211ENST00000486028 THEMISQ8N1K5 641 aaPredicted RBP18.69■□□□□ 0.58
HMG20B-211ENST00000486028 CFAP65Q6ZU64 1925 aaKnown RBP18.68■□□□□ 0.58
HMG20B-211ENST00000486028 EFCAB6Q5THR3 1501 aa18.66■□□□□ 0.58
HMG20B-211ENST00000486028 ZNF142P52746 1687 aaPredicted RBP18.66■□□□□ 0.58
HMG20B-211ENST00000486028 PKD2Q13563 968 aa18.65■□□□□ 0.58
HMG20B-211ENST00000486028 RPRD2Q5VT52 1461 aaKnown RBP18.65■□□□□ 0.58
HMG20B-211ENST00000486028 TRIM52Q96A61 297 aa18.64■□□□□ 0.57
HMG20B-211ENST00000486028 NCKAP5LQ9HCH0 1330 aa18.64■□□□□ 0.57
HMG20B-211ENST00000486028 TET3O43151 1660 aa18.63■□□□□ 0.57
HMG20B-211ENST00000486028 SLC52A1Q9NWF4 448 aa18.63■□□□□ 0.57
HMG20B-211ENST00000486028 PLA2R1Q13018 1463 aa18.63■□□□□ 0.57
HMG20B-211ENST00000486028 GCC2Q8IWJ2 1684 aa18.63■□□□□ 0.57
HMG20B-211ENST00000486028 IDI1Q13907 227 aa18.62■□□□□ 0.57
HMG20B-211ENST00000486028 STAG3Q9UJ98 1225 aa18.62■□□□□ 0.57
HMG20B-211ENST00000486028 NOS1P29475 1434 aa18.62■□□□□ 0.57
HMG20B-211ENST00000486028 UGGT1Q9NYU2 1555 aa18.62■□□□□ 0.57
HMG20B-211ENST00000486028 IQGAP3Q86VI3 1631 aa18.62■□□□□ 0.57
HMG20B-211ENST00000486028 STRCQ7RTU9 1775 aa18.61■□□□□ 0.57
HMG20B-211ENST00000486028 ANKLE2Q86XL3 938 aa18.61■□□□□ 0.57
HMG20B-211ENST00000486028 PTPRTO14522 1441 aa18.6■□□□□ 0.57
HMG20B-211ENST00000486028 ACIN1Q9UKV3 1341 aaKnown RBP18.59■□□□□ 0.57
HMG20B-211ENST00000486028 SLC4A1APQ9BWU0 796 aaKnown RBP18.56■□□□□ 0.56
HMG20B-211ENST00000486028 SETD5Q9C0A6 1442 aa18.56■□□□□ 0.56
HMG20B-211ENST00000486028 SYNMO15061 1565 aa18.55■□□□□ 0.56
HMG20B-211ENST00000486028 E9PCH4 1651 aa18.54■□□□□ 0.56
HMG20B-211ENST00000486028 EID1Q9Y6B2 187 aa18.53■□□□□ 0.56
HMG20B-211ENST00000486028 TXNDC2Q86VQ3 553 aa18.52■□□□□ 0.56
HMG20B-211ENST00000486028 UBR1Q8IWV7 1749 aa18.52■□□□□ 0.55
HMG20B-211ENST00000486028 CHGAP10645 457 aaKnown RBP18.51■□□□□ 0.55
HMG20B-211ENST00000486028 FOXD1Q16676 465 aa18.51■□□□□ 0.55
HMG20B-211ENST00000486028 PIK3C2BO00750 1634 aa18.51■□□□□ 0.55
HMG20B-211ENST00000486028 TMEM2Q9UHN6 1383 aa18.51■□□□□ 0.55
HMG20B-211ENST00000486028 LTKP29376 864 aa18.49■□□□□ 0.55
HMG20B-211ENST00000486028 MPHOSPH9Q99550 1183 aa18.49■□□□□ 0.55
HMG20B-211ENST00000486028 ARHGAP23Q9P227 1491 aa18.48■□□□□ 0.55
HMG20B-211ENST00000486028 RAB3GAP2Q9H2M9 1393 aa18.48■□□□□ 0.55
HMG20B-211ENST00000486028 HDGFP51858 240 aaKnown RBP18.48■□□□□ 0.55
HMG20B-211ENST00000486028 SLIT1O75093 1534 aa18.48■□□□□ 0.55
HMG20B-211ENST00000486028 NPHP4O75161 1426 aaPredicted RBP18.48■□□□□ 0.55
HMG20B-211ENST00000486028 KDM5AP29375 1690 aaKnown RBP18.47■□□□□ 0.55
HMG20B-211ENST00000486028 MED14O60244 1454 aa18.47■□□□□ 0.55
HMG20B-211ENST00000486028 ADGRB3O60242 1522 aa18.47■□□□□ 0.55
HMG20B-211ENST00000486028 SCAF11Q99590 1463 aaKnown RBP18.46■□□□□ 0.55
HMG20B-211ENST00000486028 HRCP23327 699 aa18.46■□□□□ 0.55
HMG20B-211ENST00000486028 NEURL4Q96JN8 1562 aa18.45■□□□□ 0.54
HMG20B-211ENST00000486028 POLR1AO95602 1720 aaPredicted RBP18.45■□□□□ 0.54
HMG20B-211ENST00000486028 CERKQ8TCT0 537 aa18.44■□□□□ 0.54
HMG20B-211ENST00000486028 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.43■□□□□ 0.54
HMG20B-211ENST00000486028 ZNF335Q9H4Z2 1342 aaPredicted RBP18.43■□□□□ 0.54
HMG20B-211ENST00000486028 SPHKAPQ2M3C7 1700 aa18.42■□□□□ 0.54
HMG20B-211ENST00000486028 TMEM131LA2VDJ0 1609 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms