RNA–Protein interactions for RNA: ENST00000485494.1

SFMBT1-206, Transcript of Scm like with four mbt domains 1, humanhuman

TSL 5

Gene SFMBT1, Length 361 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFMBT1-206ENST00000485494 RNF17Q9BXT8 1623 aaKnown RBP18.85■□□□□ 0.61
SFMBT1-206ENST00000485494 ABCA6Q8N139 1617 aa18.84■□□□□ 0.61
SFMBT1-206ENST00000485494 COL17A1Q9UMD9 1497 aaPredicted RBP18.84■□□□□ 0.61
SFMBT1-206ENST00000485494 TRIM52Q96A61 297 aa18.83■□□□□ 0.6
SFMBT1-206ENST00000485494 A2MP01023 1474 aa18.83■□□□□ 0.6
SFMBT1-206ENST00000485494 MPHOSPH9Q99550 1183 aa18.82■□□□□ 0.6
SFMBT1-206ENST00000485494 PZPP20742 1482 aa18.82■□□□□ 0.6
SFMBT1-206ENST00000485494 DIP2CQ9Y2E4 1556 aa18.81■□□□□ 0.6
SFMBT1-206ENST00000485494 PRDM15P57071 1507 aaPredicted RBP18.81■□□□□ 0.6
SFMBT1-206ENST00000485494 FAM135AQ9P2D6 1515 aa18.79■□□□□ 0.6
SFMBT1-206ENST00000485494 VWDEQ8N2E2 1590 aa18.79■□□□□ 0.6
SFMBT1-206ENST00000485494 NUP155O75694 1391 aa18.79■□□□□ 0.6
SFMBT1-206ENST00000485494 TET3O43151 1660 aa18.78■□□□□ 0.6
SFMBT1-206ENST00000485494 ZC3H13Q5T200 1668 aaKnown RBP18.77■□□□□ 0.6
SFMBT1-206ENST00000485494 SLC4A1APQ9BWU0 796 aaKnown RBP18.77■□□□□ 0.6
SFMBT1-206ENST00000485494 KANK1Q14678 1352 aa18.77■□□□□ 0.6
SFMBT1-206ENST00000485494 MYT1LQ9UL68 1186 aa18.76■□□□□ 0.59
SFMBT1-206ENST00000485494 AGLP35573 1532 aa18.75■□□□□ 0.59
SFMBT1-206ENST00000485494 ARHGEF40Q8TER5 1519 aa18.74■□□□□ 0.59
SFMBT1-206ENST00000485494 ATP10AO60312 1499 aa18.74■□□□□ 0.59
SFMBT1-206ENST00000485494 LMTK2Q8IWU2 1503 aa18.74■□□□□ 0.59
SFMBT1-206ENST00000485494 RAPGEF3O95398 923 aa18.73■□□□□ 0.59
SFMBT1-206ENST00000485494 MROH1Q8NDA8 1641 aa18.73■□□□□ 0.59
SFMBT1-206ENST00000485494 ANKRD30BQ9BXX2 1392 aa18.72■□□□□ 0.59
SFMBT1-206ENST00000485494 PPP6R1Q9UPN7 881 aa18.71■□□□□ 0.59
SFMBT1-206ENST00000485494 RPRD2Q5VT52 1461 aaKnown RBP18.69■□□□□ 0.58
SFMBT1-206ENST00000485494 E9PCH4 1651 aa18.67■□□□□ 0.58
SFMBT1-206ENST00000485494 SPHKAPQ2M3C7 1700 aa18.67■□□□□ 0.58
SFMBT1-206ENST00000485494 KIF3BO15066 747 aa18.66■□□□□ 0.58
SFMBT1-206ENST00000485494 CEP152O94986 1710 aa18.66■□□□□ 0.58
SFMBT1-206ENST00000485494 YEATS2Q9ULM3 1422 aa18.66■□□□□ 0.58
SFMBT1-206ENST00000485494 PKD2Q13563 968 aa18.65■□□□□ 0.58
SFMBT1-206ENST00000485494 EFCAB6Q5THR3 1501 aa18.64■□□□□ 0.58
SFMBT1-206ENST00000485494 NEURL4Q96JN8 1562 aa18.63■□□□□ 0.57
SFMBT1-206ENST00000485494 TONSLQ96HA7 1378 aa18.62■□□□□ 0.57
SFMBT1-206ENST00000485494 CAMSAP1Q5T5Y3 1602 aa18.61■□□□□ 0.57
SFMBT1-206ENST00000485494 TRPM2O94759 1503 aa18.6■□□□□ 0.57
SFMBT1-206ENST00000485494 ARHGAP31Q2M1Z3 1444 aa18.6■□□□□ 0.57
SFMBT1-206ENST00000485494 ABCC3O15438 1527 aa18.59■□□□□ 0.57
SFMBT1-206ENST00000485494 PTPRTO14522 1441 aa18.59■□□□□ 0.57
SFMBT1-206ENST00000485494 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.58■□□□□ 0.56
SFMBT1-206ENST00000485494 KIF1BO60333 1816 aa18.58■□□□□ 0.56
SFMBT1-206ENST00000485494 CCDC144AA2RUR9 1427 aa18.57■□□□□ 0.56
SFMBT1-206ENST00000485494 FOXD1Q16676 465 aa18.56■□□□□ 0.56
SFMBT1-206ENST00000485494 SIN3AQ96ST3 1273 aa18.55■□□□□ 0.56
SFMBT1-206ENST00000485494 STAC3Q96MF2 364 aa18.54■□□□□ 0.56
SFMBT1-206ENST00000485494 MROH2AA6NES4 1674 aa18.54■□□□□ 0.56
SFMBT1-206ENST00000485494 CFAP65Q6ZU64 1925 aaKnown RBP18.53■□□□□ 0.56
SFMBT1-206ENST00000485494 WASHC2CQ9Y4E1 1318 aa18.52■□□□□ 0.56
SFMBT1-206ENST00000485494 CNTLNQ9NXG0 1405 aa18.52■□□□□ 0.56
SFMBT1-206ENST00000485494 NEUROD1Q13562 356 aa18.52■□□□□ 0.56
SFMBT1-206ENST00000485494 PLA2R1Q13018 1463 aa18.52■□□□□ 0.55
SFMBT1-206ENST00000485494 PPP1R15AO75807 674 aaPredicted RBP18.51■□□□□ 0.55
SFMBT1-206ENST00000485494 SIGLEC1Q9BZZ2 1709 aa18.5■□□□□ 0.55
SFMBT1-206ENST00000485494 GGT6Q6P531 493 aa18.49■□□□□ 0.55
SFMBT1-206ENST00000485494 PREX1Q8TCU6 1659 aa18.48■□□□□ 0.55
SFMBT1-206ENST00000485494 NPATQ14207 1427 aa18.48■□□□□ 0.55
SFMBT1-206ENST00000485494 CLTCQ00610 1675 aaKnown RBP18.47■□□□□ 0.55
SFMBT1-206ENST00000485494 PIK3C2BO00750 1634 aa18.47■□□□□ 0.55
SFMBT1-206ENST00000485494 CLTCL1P53675 1640 aa18.46■□□□□ 0.55
SFMBT1-206ENST00000485494 NOS1P29475 1434 aa18.46■□□□□ 0.55
SFMBT1-206ENST00000485494 UHRF1BP1Q6BDS2 1440 aa18.43■□□□□ 0.54
SFMBT1-206ENST00000485494 SPATA31E1Q6ZUB1 1445 aa18.41■□□□□ 0.54
SFMBT1-206ENST00000485494 KDM5AP29375 1690 aaKnown RBP18.41■□□□□ 0.54
SFMBT1-206ENST00000485494 FER1L4A9Z1Z3 1794 aa18.41■□□□□ 0.54
SFMBT1-206ENST00000485494 L3MBTL2Q969R5 705 aa18.41■□□□□ 0.54
SFMBT1-206ENST00000485494 IFT172Q9UG01 1749 aa18.4■□□□□ 0.54
SFMBT1-206ENST00000485494 SPATA31D1Q6ZQQ2 1576 aa18.4■□□□□ 0.54
SFMBT1-206ENST00000485494 SLC52A1Q9NWF4 448 aa18.4■□□□□ 0.54
SFMBT1-206ENST00000485494 ESF1Q9H501 851 aaKnown RBP18.39■□□□□ 0.53
SFMBT1-206ENST00000485494 KIAA1210Q9ULL0 1709 aa18.38■□□□□ 0.53
SFMBT1-206ENST00000485494 SYNMO15061 1565 aa18.38■□□□□ 0.53
SFMBT1-206ENST00000485494 ADGRB3O60242 1522 aa18.37■□□□□ 0.53
SFMBT1-206ENST00000485494 ADAMTSL3P82987 1691 aa18.37■□□□□ 0.53
SFMBT1-206ENST00000485494 ERVK-7P63135 1459 aa18.36■□□□□ 0.53
SFMBT1-206ENST00000485494 ARID4BQ4LE39 1312 aaPredicted RBP18.36■□□□□ 0.53
SFMBT1-206ENST00000485494 SETD1BQ9UPS6 1966 aaKnown RBP18.35■□□□□ 0.53
SFMBT1-206ENST00000485494 PPLO60437 1756 aa18.35■□□□□ 0.53
SFMBT1-206ENST00000485494 LAMC1P11047 1609 aa18.35■□□□□ 0.53
SFMBT1-206ENST00000485494 ILDR1Q86SU0 546 aaPredicted RBP18.35■□□□□ 0.53
SFMBT1-206ENST00000485494 RPGRIP1LQ68CZ1 1315 aa18.34■□□□□ 0.53
SFMBT1-206ENST00000485494 PTPRMP28827 1452 aa18.33■□□□□ 0.53
SFMBT1-206ENST00000485494 MYOM2P54296 1465 aa18.33■□□□□ 0.53
SFMBT1-206ENST00000485494 TRPM1Q7Z4N2 1603 aa18.32■□□□□ 0.52
SFMBT1-206ENST00000485494 RALGAPBQ86X10 1494 aa18.32■□□□□ 0.52
SFMBT1-206ENST00000485494 ZNF316A6NFI3 1004 aaPredicted RBP18.31■□□□□ 0.52
SFMBT1-206ENST00000485494 ZMYM3Q14202 1370 aa18.3■□□□□ 0.52
SFMBT1-206ENST00000485494 MYO5BQ9ULV0 1848 aa18.3■□□□□ 0.52
SFMBT1-206ENST00000485494 C3P01024 1663 aa18.3■□□□□ 0.52
SFMBT1-206ENST00000485494 PRAG1Q86YV5 1406 aa18.3■□□□□ 0.52
SFMBT1-206ENST00000485494 TMEM131LA2VDJ0 1609 aa18.3■□□□□ 0.52
SFMBT1-206ENST00000485494 POLR1AO95602 1720 aaPredicted RBP18.29■□□□□ 0.52
SFMBT1-206ENST00000485494 MADDQ8WXG6 1647 aa18.29■□□□□ 0.52
SFMBT1-206ENST00000485494 DCAF11Q8TEB1 546 aa18.28■□□□□ 0.52
SFMBT1-206ENST00000485494 ZFYVE9O95405 1425 aa18.27■□□□□ 0.52
SFMBT1-206ENST00000485494 UGGT1Q9NYU2 1555 aa18.26■□□□□ 0.51
SFMBT1-206ENST00000485494 NRXN1Q9ULB1 1477 aa18.26■□□□□ 0.51
SFMBT1-206ENST00000485494 NLRP1Q9C000 1473 aa18.25■□□□□ 0.51
SFMBT1-206ENST00000485494 PLPPR3Q6T4P5 718 aa18.24■□□□□ 0.51
SFMBT1-206ENST00000485494 GPRASP1Q5JY77 1395 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms