RNA–Protein interactions for RNA: ENST00000484589.1

CDK13-205, Transcript of cyclin dependent kinase 13, humanhuman

TSL 1 (best)

Gene CDK13, Length 2,111 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK13-205ENST00000484589 ARHGEF40Q8TER5 1519 aa12.78□□□□□ -0.36
CDK13-205ENST00000484589 ATP10AO60312 1499 aa12.77□□□□□ -0.36
CDK13-205ENST00000484589 A2MP01023 1474 aa12.77□□□□□ -0.37
CDK13-205ENST00000484589 DHX29Q7Z478 1369 aaKnown RBP12.77□□□□□ -0.37
CDK13-205ENST00000484589 ANKRD50Q9ULJ7 1429 aa12.76□□□□□ -0.37
CDK13-205ENST00000484589 KIF3BO15066 747 aa12.75□□□□□ -0.37
CDK13-205ENST00000484589 DUOX2Q9NRD8 1548 aa12.75□□□□□ -0.37
CDK13-205ENST00000484589 SETD5Q9C0A6 1442 aa12.74□□□□□ -0.37
CDK13-205ENST00000484589 RAB3GAP2Q9H2M9 1393 aa12.74□□□□□ -0.37
CDK13-205ENST00000484589 MLECQ14165 292 aa12.73□□□□□ -0.37
CDK13-205ENST00000484589 ARID4BQ4LE39 1312 aaPredicted RBP12.73□□□□□ -0.37
CDK13-205ENST00000484589 GCC2Q8IWJ2 1684 aa12.73□□□□□ -0.37
CDK13-205ENST00000484589 GGT6Q6P531 493 aa12.72□□□□□ -0.37
CDK13-205ENST00000484589 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.71□□□□□ -0.372e-6■□□□□ 10.1
CDK13-205ENST00000484589 ERBINQ96RT1 1412 aa12.71□□□□□ -0.37
CDK13-205ENST00000484589 REREQ9P2R6 1566 aa12.7□□□□□ -0.38
CDK13-205ENST00000484589 TRIM52Q96A61 297 aa12.68□□□□□ -0.38
CDK13-205ENST00000484589 MROH1Q8NDA8 1641 aa12.67□□□□□ -0.38
CDK13-205ENST00000484589 AGLP35573 1532 aa12.67□□□□□ -0.38
CDK13-205ENST00000484589 EIF2AK4Q9P2K8 1649 aaKnown RBP12.66□□□□□ -0.38
CDK13-205ENST00000484589 NUP155O75694 1391 aa12.66□□□□□ -0.38
CDK13-205ENST00000484589 EIF5BO60841 1220 aaKnown RBP12.66□□□□□ -0.38
CDK13-205ENST00000484589 BCANQ96GW7 911 aa12.65□□□□□ -0.38
CDK13-205ENST00000484589 BCORL1Q5H9F3 1711 aa12.65□□□□□ -0.38
CDK13-205ENST00000484589 DEPDC5O75140 1603 aa12.64□□□□□ -0.39
CDK13-205ENST00000484589 RNF17Q9BXT8 1623 aaKnown RBP12.64□□□□□ -0.39
CDK13-205ENST00000484589 KLHL34Q8N239 644 aa12.64□□□□□ -0.39
CDK13-205ENST00000484589 WASHC2CQ9Y4E1 1318 aa12.63□□□□□ -0.39
CDK13-205ENST00000484589 UNC13BO14795 1591 aa12.63□□□□□ -0.39
CDK13-205ENST00000484589 PRDM15P57071 1507 aaPredicted RBP12.63□□□□□ -0.39
CDK13-205ENST00000484589 HRCP23327 699 aa12.62□□□□□ -0.39
CDK13-205ENST00000484589 FOXD1Q16676 465 aa12.62□□□□□ -0.39
CDK13-205ENST00000484589 PZPP20742 1482 aa12.62□□□□□ -0.39
CDK13-205ENST00000484589 FAM135AQ9P2D6 1515 aa12.61□□□□□ -0.39
CDK13-205ENST00000484589 MPHOSPH9Q99550 1183 aa12.61□□□□□ -0.39
CDK13-205ENST00000484589 SLC4A1APQ9BWU0 796 aaKnown RBP12.61□□□□□ -0.39
CDK13-205ENST00000484589 VWDEQ8N2E2 1590 aa12.6□□□□□ -0.39
CDK13-205ENST00000484589 CEP152O94986 1710 aa12.6□□□□□ -0.39
CDK13-205ENST00000484589 CFAP65Q6ZU64 1925 aaKnown RBP12.6□□□□□ -0.39
CDK13-205ENST00000484589 TPRNQ4KMQ1 711 aa12.6□□□□□ -0.39
CDK13-205ENST00000484589 ABCC3O15438 1527 aa12.6□□□□□ -0.39
CDK13-205ENST00000484589 KDM4FA0A1W2PPD8 638 aa12.59□□□□□ -0.39
CDK13-205ENST00000484589 CEBPAP49715 358 aaPredicted RBP12.59□□□□□ -0.39
CDK13-205ENST00000484589 CLTCQ00610 1675 aaKnown RBP12.59□□□□□ -0.39
CDK13-205ENST00000484589 IQGAP3Q86VI3 1631 aa12.58□□□□□ -0.39
CDK13-205ENST00000484589 PKD2Q13563 968 aa12.58□□□□□ -0.4
CDK13-205ENST00000484589 KANK1Q14678 1352 aa12.58□□□□□ -0.4
CDK13-205ENST00000484589 MADDQ8WXG6 1647 aa12.58□□□□□ -0.4
CDK13-205ENST00000484589 KDM5DQ9BY66 1539 aa12.58□□□□□ -0.4
CDK13-205ENST00000484589 ADAMTSL3P82987 1691 aa12.57□□□□□ -0.4
CDK13-205ENST00000484589 FBXO31Q5XUX0 539 aaPredicted RBP12.57□□□□□ -0.4
CDK13-205ENST00000484589 DHX57Q6P158 1386 aaKnown RBP12.57□□□□□ -0.4
CDK13-205ENST00000484589 FER1L4A9Z1Z3 1794 aa12.56□□□□□ -0.4
CDK13-205ENST00000484589 ESF1Q9H501 851 aaKnown RBP12.56□□□□□ -0.4
CDK13-205ENST00000484589 PPP6R1Q9UPN7 881 aa12.56□□□□□ -0.4
CDK13-205ENST00000484589 ZMYM3Q14202 1370 aa12.56□□□□□ -0.4
CDK13-205ENST00000484589 PODXL2Q9NZ53 605 aa12.55□□□□□ -0.4
CDK13-205ENST00000484589 NPATQ14207 1427 aa12.55□□□□□ -0.4
CDK13-205ENST00000484589 E9PCH4 1651 aa12.55□□□□□ -0.4
CDK13-205ENST00000484589 LMTK2Q8IWU2 1503 aa12.55□□□□□ -0.4
CDK13-205ENST00000484589 RIMS1Q86UR5 1692 aaKnown RBP12.54□□□□□ -0.4
CDK13-205ENST00000484589 CAMSAP1Q5T5Y3 1602 aa12.54□□□□□ -0.4
CDK13-205ENST00000484589 TET3O43151 1660 aa12.54□□□□□ -0.4
CDK13-205ENST00000484589 EFCAB6Q5THR3 1501 aa12.54□□□□□ -0.4
CDK13-205ENST00000484589 ZC3H13Q5T200 1668 aaKnown RBP12.52□□□□□ -0.4
CDK13-205ENST00000484589 PLA2R1Q13018 1463 aa12.51□□□□□ -0.41
CDK13-205ENST00000484589 C3P01024 1663 aa12.51□□□□□ -0.41
CDK13-205ENST00000484589 CNTLNQ9NXG0 1405 aa12.51□□□□□ -0.41
CDK13-205ENST00000484589 ACIN1Q9UKV3 1341 aaKnown RBP12.5□□□□□ -0.41
CDK13-205ENST00000484589 ARHGAP31Q2M1Z3 1444 aa12.5□□□□□ -0.41
CDK13-205ENST00000484589 PTPRMP28827 1452 aa12.49□□□□□ -0.41
CDK13-205ENST00000484589 CCER1Q8TC90 406 aaPredicted RBP12.49□□□□□ -0.41
CDK13-205ENST00000484589 SIN3AQ96ST3 1273 aa12.49□□□□□ -0.41
CDK13-205ENST00000484589 ANKRD30BQ9BXX2 1392 aa12.48□□□□□ -0.41
CDK13-205ENST00000484589 UGGT1Q9NYU2 1555 aa12.48□□□□□ -0.41
CDK13-205ENST00000484589 MROH2AA6NES4 1674 aa12.48□□□□□ -0.41
CDK13-205ENST00000484589 PREX1Q8TCU6 1659 aa12.47□□□□□ -0.41
CDK13-205ENST00000484589 ERVK-7P63135 1459 aa12.47□□□□□ -0.41
CDK13-205ENST00000484589 RPRD2Q5VT52 1461 aaKnown RBP12.47□□□□□ -0.41
CDK13-205ENST00000484589 PTPRTO14522 1441 aa12.47□□□□□ -0.41
CDK13-205ENST00000484589 NOS1P29475 1434 aa12.47□□□□□ -0.41
CDK13-205ENST00000484589 SYNMO15061 1565 aa12.46□□□□□ -0.42
CDK13-205ENST00000484589 SPHKAPQ2M3C7 1700 aa12.45□□□□□ -0.42
CDK13-205ENST00000484589 IDI1Q13907 227 aa12.45□□□□□ -0.42
CDK13-205ENST00000484589 SPATA31D1Q6ZQQ2 1576 aa12.44□□□□□ -0.42
CDK13-205ENST00000484589 NEUROD1Q13562 356 aa12.44□□□□□ -0.42
CDK13-205ENST00000484589 GTF3C3Q9Y5Q9 886 aa12.43□□□□□ -0.42
CDK13-205ENST00000484589 TNRQ92752 1358 aa12.43□□□□□ -0.42
CDK13-205ENST00000484589 TRPM2O94759 1503 aa12.42□□□□□ -0.42
CDK13-205ENST00000484589 CLTCL1P53675 1640 aa12.42□□□□□ -0.42
CDK13-205ENST00000484589 SETD1BQ9UPS6 1966 aaKnown RBP12.41□□□□□ -0.42
CDK13-205ENST00000484589 CCDC144AA2RUR9 1427 aa12.41□□□□□ -0.42
CDK13-205ENST00000484589 CHGAP10645 457 aaKnown RBP12.4□□□□□ -0.43
CDK13-205ENST00000484589 PIK3C2BO00750 1634 aa12.4□□□□□ -0.43
CDK13-205ENST00000484589 PLCB2Q00722 1185 aa12.39□□□□□ -0.43
CDK13-205ENST00000484589 RGL3Q3MIN7 710 aa12.39□□□□□ -0.43
CDK13-205ENST00000484589 SLC52A1Q9NWF4 448 aa12.39□□□□□ -0.43
CDK13-205ENST00000484589 MYO5BQ9ULV0 1848 aa12.37□□□□□ -0.43
CDK13-205ENST00000484589 MYO3AQ8NEV4 1616 aa12.37□□□□□ -0.43
CDK13-205ENST00000484589 SPATA31E1Q6ZUB1 1445 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 188.5 ms