RNA–Protein interactions for RNA: ENST00000484088.5

ITGB1-213, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-213ENST00000484088 DDX12PQ92771 950 aa5.88□□□□□ -1.47
ITGB1-213ENST00000484088 SLC4A5Q9BY07 1137 aa5.88□□□□□ -1.47
ITGB1-213ENST00000484088 OSBPP22059 807 aa5.87□□□□□ -1.47
ITGB1-213ENST00000484088 TSR1Q2NL82 804 aaKnown RBP5.87□□□□□ -1.47
ITGB1-213ENST00000484088 FAM198AQ9UFP1 575 aa5.87□□□□□ -1.47
ITGB1-213ENST00000484088 KDM2AQ9Y2K7 1162 aa5.87□□□□□ -1.47
ITGB1-213ENST00000484088 MLLT3P42568 568 aaPredicted RBP5.84□□□□□ -1.47
ITGB1-213ENST00000484088 C6orf132Q5T0Z8 1188 aa5.84□□□□□ -1.47
ITGB1-213ENST00000484088 TYW1BQ6NUM6 668 aa5.84□□□□□ -1.47
ITGB1-213ENST00000484088 CDHR5Q9HBB8 845 aa5.84□□□□□ -1.47
ITGB1-213ENST00000484088 NPDC1Q9NQX5 325 aaPredicted RBP5.84□□□□□ -1.47
ITGB1-213ENST00000484088 PTPREP23469 700 aa5.83□□□□□ -1.48
ITGB1-213ENST00000484088 HAP1P54257 671 aaPredicted RBP5.83□□□□□ -1.48
ITGB1-213ENST00000484088 EN1Q05925 392 aaPredicted RBP5.83□□□□□ -1.48
ITGB1-213ENST00000484088 PPP1R3GB7ZBB8 358 aa5.82□□□□□ -1.48
ITGB1-213ENST00000484088 RBM33Q96EV2 1170 aaKnown RBP5.82□□□□□ -1.48
ITGB1-213ENST00000484088 TSKSQ9UJT2 592 aa5.82□□□□□ -1.48
ITGB1-213ENST00000484088 SPDYE16A6NNV3 312 aaPredicted RBP5.81□□□□□ -1.48
ITGB1-213ENST00000484088 FBXW7Q969H0 707 aa5.81□□□□□ -1.48
ITGB1-213ENST00000484088 EPAS1Q99814 870 aa5.81□□□□□ -1.48
ITGB1-213ENST00000484088 NBR1Q14596 966 aa5.8□□□□□ -1.48
ITGB1-213ENST00000484088 VSIG10Q8N0Z9 540 aa5.8□□□□□ -1.48
ITGB1-213ENST00000484088 ARHGEF1Q92888 912 aaKnown RBP5.79□□□□□ -1.48
ITGB1-213ENST00000484088 GRXCR2A6NFK2 248 aa5.78□□□□□ -1.48
ITGB1-213ENST00000484088 TTC13Q8NBP0 860 aa5.78□□□□□ -1.48
ITGB1-213ENST00000484088 KIAA1468Q9P260 1216 aa5.78□□□□□ -1.48
ITGB1-213ENST00000484088 TRIM6-TRIM34B2RNG4 842 aa5.77□□□□□ -1.49
ITGB1-213ENST00000484088 KCTD12Q96CX2 325 aaKnown RBP5.77□□□□□ -1.49
ITGB1-213ENST00000484088 RABGEF1Q9UJ41 708 aa5.77□□□□□ -1.49
ITGB1-213ENST00000484088 SEMA3EO15041 775 aa5.76□□□□□ -1.49
ITGB1-213ENST00000484088 THSD4Q6ZMP0 1018 aa5.76□□□□□ -1.49
ITGB1-213ENST00000484088 WDR70Q9NW82 654 aa5.76□□□□□ -1.49
ITGB1-213ENST00000484088 ONECUT3O60422 494 aaPredicted RBP5.75□□□□□ -1.49
ITGB1-213ENST00000484088 SEPT9Q9UHD8 586 aaPredicted RBP5.75□□□□□ -1.49
ITGB1-213ENST00000484088 GPR37O15354 613 aa5.74□□□□□ -1.49
ITGB1-213ENST00000484088 MAP3K7O43318 606 aa5.74□□□□□ -1.49
ITGB1-213ENST00000484088 CDCA7LQ96GN5 454 aa5.74□□□□□ -1.49
ITGB1-213ENST00000484088 SMAPO00193 183 aa5.73□□□□□ -1.49
ITGB1-213ENST00000484088 BCAMP50895 628 aa5.73□□□□□ -1.49
ITGB1-213ENST00000484088 PRSS12P56730 875 aa5.73□□□□□ -1.49
ITGB1-213ENST00000484088 TESPA1A2RU30 521 aaPredicted RBP5.72□□□□□ -1.49
ITGB1-213ENST00000484088 ZFRQ96KR1 1074 aaKnown RBP5.72□□□□□ -1.49
ITGB1-213ENST00000484088 HCSTQ9UBK5 93 aa5.72□□□□□ -1.49
ITGB1-213ENST00000484088 PTGDRQ13258 359 aa5.71□□□□□ -1.5
ITGB1-213ENST00000484088 MRPL50Q8N5N7 158 aaKnown RBP5.71□□□□□ -1.5
ITGB1-213ENST00000484088 WNT2BQ93097 391 aa5.71□□□□□ -1.5
ITGB1-213ENST00000484088 SOWAHBA6NEL2 793 aa5.7□□□□□ -1.5
ITGB1-213ENST00000484088 PTPN5P54829 565 aa5.7□□□□□ -1.5
ITGB1-213ENST00000484088 PADI6Q6TGC4 694 aa5.7□□□□□ -1.5
ITGB1-213ENST00000484088 FECHP22830 423 aa5.69□□□□□ -1.5
ITGB1-213ENST00000484088 LAPTM4BQ86VI4 370 aa5.69□□□□□ -1.5
ITGB1-213ENST00000484088 EYA1Q99502 592 aa5.69□□□□□ -1.5
ITGB1-213ENST00000484088 WBP1LQ9NX94 342 aa5.69□□□□□ -1.5
ITGB1-213ENST00000484088 FAM98CQ17RN3 349 aaKnown RBP5.68□□□□□ -1.5
ITGB1-213ENST00000484088 FAM161AQ3B820 660 aa5.68□□□□□ -1.5
ITGB1-213ENST00000484088 RBM26Q5T8P6 1007 aaKnown RBP5.68□□□□□ -1.5
ITGB1-213ENST00000484088 TATDN2Q93075 761 aa5.68□□□□□ -1.5
ITGB1-213ENST00000484088 NUDT18Q6ZVK8 323 aa5.67□□□□□ -1.5
ITGB1-213ENST00000484088 KCNH8Q96L42 1107 aa5.67□□□□□ -1.5
ITGB1-213ENST00000484088 NBPF3Q9H094 633 aa5.67□□□□□ -1.5
ITGB1-213ENST00000484088 PLA2G2EQ9NZK7 142 aa5.67□□□□□ -1.5
ITGB1-213ENST00000484088 RBM27Q9P2N5 1060 aaKnown RBP5.67□□□□□ -1.5
ITGB1-213ENST00000484088 SAMD7Q7Z3H4 446 aa5.65□□□□□ -1.5
ITGB1-213ENST00000484088 PNMA3Q9UL41 463 aa5.65□□□□□ -1.5
ITGB1-213ENST00000484088 CERKQ8TCT0 537 aa5.64□□□□□ -1.51
ITGB1-213ENST00000484088 PHOX2BQ99453 314 aa5.64□□□□□ -1.51
ITGB1-213ENST00000484088 ADGRG1Q9Y653 693 aa5.64□□□□□ -1.51
ITGB1-213ENST00000484088 ITGBL1O95965 494 aaPredicted RBP5.63□□□□□ -1.51
ITGB1-213ENST00000484088 IFFO2Q5TF58 517 aa5.63□□□□□ -1.51
ITGB1-213ENST00000484088 PACS2Q86VP3 889 aa5.63□□□□□ -1.51
ITGB1-213ENST00000484088 P3H3Q8IVL6 736 aa5.63□□□□□ -1.51
ITGB1-213ENST00000484088 ANKK1Q8NFD2 765 aa5.62□□□□□ -1.51
ITGB1-213ENST00000484088 BCANQ96GW7 911 aa5.62□□□□□ -1.51
ITGB1-213ENST00000484088 APLP1P51693 650 aa5.61□□□□□ -1.51
ITGB1-213ENST00000484088 TJAP1Q5JTD0 557 aa5.61□□□□□ -1.51
ITGB1-213ENST00000484088 HPS5Q9UPZ3 1129 aa5.61□□□□□ -1.51
ITGB1-213ENST00000484088 SWT1Q5T5J6 900 aaKnown RBP5.6□□□□□ -1.51
ITGB1-213ENST00000484088 STAC3Q96MF2 364 aa5.6□□□□□ -1.51
ITGB1-213ENST00000484088 CDKN2AIPQ9NXV6 580 aaPredicted RBP5.6□□□□□ -1.51
ITGB1-213ENST00000484088 TSR3Q9UJK0 312 aaKnown RBP5.6□□□□□ -1.51
ITGB1-213ENST00000484088 GOLGA8CPA6NN73 597 aa5.59□□□□□ -1.51
ITGB1-213ENST00000484088 NBPF26B4DH59 902 aa5.59□□□□□ -1.51
ITGB1-213ENST00000484088 SLC10A3P09131 477 aa5.59□□□□□ -1.51
ITGB1-213ENST00000484088 PXYLP1Q8TE99 480 aa5.59□□□□□ -1.51
ITGB1-213ENST00000484088 A0A0G2JS52 829 aa5.58□□□□□ -1.52
ITGB1-213ENST00000484088 NUTM2FA1L443 756 aa5.58□□□□□ -1.52
ITGB1-213ENST00000484088 NLRP7Q8WX94 980 aa5.58□□□□□ -1.52
ITGB1-213ENST00000484088 ZNF516Q92618 1163 aa5.58□□□□□ -1.52
ITGB1-213ENST00000484088 LRCH3Q96II8 777 aa5.58□□□□□ -1.52
ITGB1-213ENST00000484088 RCCD1A6NED2 376 aa5.57□□□□□ -1.52
ITGB1-213ENST00000484088 TMEM134Q9H6X4 195 aa5.57□□□□□ -1.52
ITGB1-213ENST00000484088 FCHSD2O94868 740 aa5.56□□□□□ -1.52
ITGB1-213ENST00000484088 METTL3Q86U44 580 aaKnown RBP5.56□□□□□ -1.52
ITGB1-213ENST00000484088 PRKCSHP14314 528 aaPredicted RBP5.55□□□□□ -1.52
ITGB1-213ENST00000484088 HIC1Q14526 733 aa5.55□□□□□ -1.52
ITGB1-213ENST00000484088 NKX2-3Q8TAU0 364 aa5.55□□□□□ -1.52
ITGB1-213ENST00000484088 EMID1Q96A84 441 aaPredicted RBP5.55□□□□□ -1.52
ITGB1-213ENST00000484088 GNPATO15228 680 aa5.54□□□□□ -1.52
ITGB1-213ENST00000484088 DHX30Q7L2E3 1194 aaKnown RBP eCLIP5.54□□□□□ -1.52
ITGB1-213ENST00000484088 MTRQ99707 1265 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 118.9 ms